EY659410

Overview
NameEY659410
Unique NameEY659410
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2169 contig Csv1_Contig2169:136..1023. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_STRPD (Elongation factor Tu OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=tuf PE=3 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.463e-27
Identity = 83/247 (33.60%), Postives = 126/247 (51.01%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 748
            VN  T GH+ +    +   +     +       +   YA + D    ERERGITI+ A  ++ET   +   IDAPGH D++KNMITG +Q D A+L++ ST G          QTREH LL+  +GVK +I   NK+D       +   + +  E+   L +  +  + +P +    +   EGD   E            L+D +D+ I EP+R +DKPL LP++DV+ I G GTV  GR++ G ++
Sbjct:   13 VNIGTIGHVDHGKTTLTAAITTVLARRLPSSVNQPKDYASI-DAAPEERERGITINTAHVEYETATRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDTKFEDII-------MELMDTVDSYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGTVR 241          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_STRPC (Elongation factor Tu OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=tuf PE=3 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.463e-27
Identity = 83/247 (33.60%), Postives = 126/247 (51.01%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 748
            VN  T GH+ +    +   +     +       +   YA + D    ERERGITI+ A  ++ET   +   IDAPGH D++KNMITG +Q D A+L++ ST G          QTREH LL+  +GVK +I   NK+D       +   + +  E+   L +  +  + +P +    +   EGD   E            L+D +D+ I EP+R +DKPL LP++DV+ I G GTV  GR++ G ++
Sbjct:   13 VNIGTIGHVDHGKTTLTAAITTVLARRLPSSVNQPKDYASI-DAAPEERERGITINTAHVEYETATRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDTKFEDII-------MELMDTVDSYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGTVR 241          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_STRP6 (Elongation factor Tu OS=Streptococcus pyogenes serotype M6 GN=tuf PE=1 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.463e-27
Identity = 83/247 (33.60%), Postives = 126/247 (51.01%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 748
            VN  T GH+ +    +   +     +       +   YA + D    ERERGITI+ A  ++ET   +   IDAPGH D++KNMITG +Q D A+L++ ST G          QTREH LL+  +GVK +I   NK+D       +   + +  E+   L +  +  + +P +    +   EGD   E            L+D +D+ I EP+R +DKPL LP++DV+ I G GTV  GR++ G ++
Sbjct:   13 VNIGTIGHVDHGKTTLTAAITTVLARRLPSSVNQPKDYASI-DAAPEERERGITINTAHVEYETATRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDTKFEDII-------MELMDTVDSYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGTVR 241          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_STRP3 (Elongation factor Tu OS=Streptococcus pyogenes serotype M3 GN=tuf PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.463e-27
Identity = 83/247 (33.60%), Postives = 126/247 (51.01%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 748
            VN  T GH+ +    +   +     +       +   YA + D    ERERGITI+ A  ++ET   +   IDAPGH D++KNMITG +Q D A+L++ ST G          QTREH LL+  +GVK +I   NK+D       +   + +  E+   L +  +  + +P +    +   EGD   E            L+D +D+ I EP+R +DKPL LP++DV+ I G GTV  GR++ G ++
Sbjct:   13 VNIGTIGHVDHGKTTLTAAITTVLARRLPSSVNQPKDYASI-DAAPEERERGITINTAHVEYETATRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDTKFEDII-------MELMDTVDSYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGTVR 241          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_STRP1 (Elongation factor Tu OS=Streptococcus pyogenes serotype M1 GN=tuf PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.463e-27
Identity = 83/247 (33.60%), Postives = 126/247 (51.01%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 748
            VN  T GH+ +    +   +     +       +   YA + D    ERERGITI+ A  ++ET   +   IDAPGH D++KNMITG +Q D A+L++ ST G          QTREH LL+  +GVK +I   NK+D       +   + +  E+   L +  +  + +P +    +   EGD   E            L+D +D+ I EP+R +DKPL LP++DV+ I G GTV  GR++ G ++
Sbjct:   13 VNIGTIGHVDHGKTTLTAAITTVLARRLPSSVNQPKDYASI-DAAPEERERGITINTAHVEYETATRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDTKFEDII-------MELMDTVDSYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGTVR 241          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_STREM (Elongation factor Tu OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=tuf PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.463e-27
Identity = 83/247 (33.60%), Postives = 127/247 (51.42%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 748
            VN  T GH+ +    +   +     +       +   YA + D    ERERGITI+ A  ++ET   +   IDAPGH D++KNMITG +Q D A+L++ ST G          QTREH LL+  +GVK +I   NK+D       +   + +  E+   L +  +  + +P +    +   EGD+  E            L+D +D+ I EP+R +DKPL LP++DV+ I G GTV  GR++ G ++
Sbjct:   13 VNIGTIGHVDHGKTTLTAAITTVLARRLPSSVNQPKDYASI-DAAPEERERGITINTAHVEYETATRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDSKYEDII-------MELMDTVDSYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGTVR 241          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_KINRD (Elongation factor Tu OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=tuf PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.463e-27
Identity = 86/247 (34.82%), Postives = 126/247 (51.01%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDW-YKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 745
            VN  T GH+ +    +   +      +  E+NK S      +DK   ER+RGITI IA  +++T   +   +D PGH D+IKNMITG +Q D A+L++ +T G          QT+EH +LA  +GV  ++   NK D       +   + +  EV   L    +  + VP V +S     EGD         +W  K   L+DA+D  I EP+R  D+P  +P++DV+ I G GTV  GR+E GVL
Sbjct:   13 VNIGTIGHIDHGKTTLTAAITRVLHDKFPELNKASAFDQ--IDKAPEERQRGITISIAHVEYQTEARHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVILARQVGVPYIVVALNKADMVE---DEELLELVEMEVRELLSSYEFPGDDVPVVRVSALKALEGD--------AEWGDKLMELMDAVDTAIPEPERAIDQPFLMPIEDVFTITGRGTVVTGRIERGVL 239          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_DESAH (Elongation factor Tu OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=tuf PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.463e-27
Identity = 86/248 (34.68%), Postives = 123/248 (49.60%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGP--TLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            VN  T GH+ +    +   +     K AA      F     +DK   ERERGITI  A  ++ET K +   +D PGH D+IKNMITG +Q D A+L++ +  G          QTREH LLA  +GV  ++   NK D       +   + +  E+   L K  +  +  P V  S  +    +E  T+ D    P   LLD LD  + EP R +DK   +P++DV+ I G GTV  GR++ G++K G
Sbjct:   13 VNIGTIGHIDHGKTTLTAAIT----KHAALRGFGKFVAFDEIDKAPEERERGITISTAHVEYETAKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSADDGPMP-------QTREHILLARQVGVPSIVVFLNKCDMVD---DEELIELVEMELQELLTKYEFPGDDTPIVRGSALKA---LEADTSDDPAAEPILKLLDVLDEYVKEPVRDTDKDFLMPIEDVFSISGRGTVVTGRIDRGIIKTG 243          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_CORDI (Elongation factor Tu OS=Corynebacterium diphtheriae GN=tuf PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.463e-27
Identity = 83/247 (33.60%), Postives = 132/247 (53.44%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDAL----DNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 748
            VN  T GH+ +        + +       E+N+ +F +   +DK   E+ERGITI+I+  +++T K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK D       +   + +  E+   L +  Y+ E+ P + IS  +     E+ T        +++D +    D+I +P+R +DKP  +P++D++ I G GTV  GRVE G LK
Sbjct:   13 VNIGTIGHVDHGKTTTTAAITKVLADAYPELNE-AFAFD-AIDKAPEEKERGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKCDMVD---DEEIIELVEMEIRELLAEQDYD-EEAPIIHISALKALEGDEKWTQ-------SIIDLMQACDDSIPDPERETDKPFLMPIEDIFTITGRGTVVTGRVERGSLK 239          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_CLAM3 (Elongation factor Tu OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=tuf PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.463e-27
Identity = 79/206 (38.35%), Postives = 112/206 (54.37%), Query Frame = 2
Query:  143 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG---FEGD-NMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 745
            +D    ER+RGITI+I+  ++ET K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK D       +   + +  EV   L    ++ +  P V +SG    EGD   +E+           L+DA+D +I EP R  DKP  +P++DV+ I G GTV  GR E G L
Sbjct:   53 IDSAPEERQRGITINISHVEYETPKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPM-------AQTREHVLLAKQVGVPYLLVALNKSDMVD---DEEILELVELEVRELLSSQDFDGDNAPVVQVSGLKALEGDEKWVEQIVK--------LMDAVDESIPEPVRDKDKPFLMPVEDVFTITGRGTVVTGRAERGTL 240          
The following BLAST results are available for this feature:
BLAST of EY659410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_STRPD1.463e-2733.60Elongation factor Tu OS=Streptococcus pyogenes ser... [more]
EFTU_STRPC1.463e-2733.60Elongation factor Tu OS=Streptococcus pyogenes ser... [more]
EFTU_STRP61.463e-2733.60Elongation factor Tu OS=Streptococcus pyogenes ser... [more]
EFTU_STRP31.463e-2733.60Elongation factor Tu OS=Streptococcus pyogenes ser... [more]
EFTU_STRP11.463e-2733.60Elongation factor Tu OS=Streptococcus pyogenes ser... [more]
EFTU_STREM1.463e-2733.60Elongation factor Tu OS=Streptococcus equi subsp. ... [more]
EFTU_KINRD1.463e-2734.82Elongation factor Tu OS=Kineococcus radiotolerans ... [more]
EFTU_DESAH1.463e-2734.68Elongation factor Tu OS=Desulfobacterium autotroph... [more]
EFTU_CORDI1.463e-2733.60Elongation factor Tu OS=Corynebacterium diphtheria... [more]
EFTU_CLAM31.463e-2738.35Elongation factor Tu OS=Clavibacter michiganensis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-G12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659410 ID=EY659410; Name=EY659410; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGCGACTCTGGTAAACGCAACCACCACCGGACACTTGATCT
ACAAGCTTGGTGGTATTGACAAGCGTGTGATCGAGAGGTTCGAGAAGGAA
GCTGCTGAGATGAACAAGAGGTCATTCAAGTATGCCTGGGTGCTCGACAA
GCTCAAGGCTGAGCGTGAACGTGGTATTACCATTGATATTGCCTTGTGGA
AGTTCGAGACCACCAAGTACTACTGCACCGTCATTGATGCTCCTGGACAT
CGTGACTTTATCAAGAACATGATTACCGGTACCTCACAGGCTGACTGTGC
CGTCCTTATCATTGACTCCACCACCGGTGGTTTTGAAGCTGGTATCTCCA
AGGATGGTCAGACTCGTGAGCATGCTTTGCTTGCTTTCACCCTTGGTGTG
AAGCAGATGATTTGCTGCTGTAACAAGATGGACGCCACCACCCCCAAGTA
CTCAAAGGCTAGGTACGATGAAATTGTGAAGGAGGTCTCTTCCTACCTGA
AGAAGGTTGGATACAACCCCGAGAAAGTCCCATTCGTGCCCATCTCTGGT
TTCGAGGGTGACAACATGATTGAGAGGTCTACCAACCTTGACTGGTACAA
GGGTCCAACCCTGCTGGATGCTCTTGACAATATCAATGAGCCGAAGAGGC
CCTCAGACAAGCCCCTTCGTCTGCCACTCCAGGACGTGTACAAGATTGGT
GGCATTGGAACCGTCCCAGTGGGTCGCGTTGAGACCGGTGTCCTCAAGCC
TGGTATGGTGGTGACATTTGGCCCCTCTGGATGACAACTGAGGNTAAGTC
TNGTGAGATGCACACGAAGCTCTGCAGGAGGCCCTTCGGGTGACATGNTG
GCTTCACGTGAAGAACGTGCTGTCAAGATCTCAGCGTG
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