EY659410

Overview
NameEY659410
Unique NameEY659410
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2169 contig Csv1_Contig2169:136..1023. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU2_ORITB (Elongation factor Tu 2 OS=Orientia tsutsugamushi (strain Boryong) GN=tuf2 PE=3 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.463e-27
Identity = 79/206 (38.35%), Postives = 111/206 (53.88%), Query Frame = 2
Query:  143 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            +D    ER RGITI  A  +F + K +  ++D PGH D+IKNMITG SQ D  +L++    G          QTREH LLA  +GV  +I C NK+D   P+      + I  EV   L K  +  + VP +  S  +  N      + D  KG   L+D++D+ I +P R  D+P  +P++DV+ I G GTV  GR+E GV+K G
Sbjct:   51 IDSAPEERARGITIQTAHVEFISKKRHYALVDCPGHVDYIKNMITGASQTDGLILVVSGVDGVMP-------QTREHVLLAKQVGVPSIIVCINKIDQADPEL----LELIEMEVRELLTKYDFPGDTVPIIRCSALKAIN-----GDSDAKKGILELMDSIDDYIPQPTRVLDQPFLMPIEDVFSILGRGTVVTGRIERGVIKVG 240          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_SOLUE (Elongation factor Tu OS=Solibacter usitatus (strain Ellin6076) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.910e-27
Identity = 82/249 (32.93%), Postives = 127/249 (51.00%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            VN  T GH+ +    +   + +   K   +   RSF     +D    E+ RGITI +A  ++ET K +   +D PGH D+IKNMITG +Q D A++++ +T G          QTREH LLA  +GV  ++   NK+D           D +  EV   LK   +  + +P V +S      G+   E++ +        L++A+D+ I  P+R  DKP  +P++D++ I G GTV  GR+E G+ K G
Sbjct:   13 VNIGTIGHIDHGKTTLTAAITKVLAKHNPKNKFRSFDS---IDNAPEEKARGITIAVAHVEYETAKRHYAHVDCPGHADYIKNMITGAAQMDGAIVVVAATDGPMP-------QTREHILLARQVGVPYIVVAMNKVDMVD---DSELLDLVELEVRELLKSYQFPGDDLPVVRVSALGALNGEPQWEKTVD-------ELMEAVDSYIPMPERAIDKPFIMPIEDIFSIQGRGTVVTGRIERGICKVG 241          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_NOCSJ (Elongation factor Tu OS=Nocardioides sp. (strain BAA-499 / JS614) GN=tuf PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.910e-27
Identity = 79/249 (31.73%), Postives = 130/249 (52.21%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINE----PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            VN  T GH+ +    +   + +    +  ++N   F     +DK   ER+RGITI IA  +++T   +   +D PGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK D       +   + +  EV   L +  +  + +P V ++ F        + N D   G ++L+ ++ ++E    P+R ++KP  +P++DV+ I G GTV  GR+E G++K G
Sbjct:   13 VNIGTIGHIDHGKTTLTAAITKVLHDKYPDLNP--FTPFDEIDKAPEERQRGITISIAHVEYQTESRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPALVVALNKCDMVD---DEELIELVEMEVRELLSEYEFPGDDIPVVRVAAFP-------ALNGDAKWGESVLELMNAVDEYIPTPERDTEKPFLMPVEDVFTITGRGTVITGRIERGIVKVG 242          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_MYCS2 (Elongation factor Tu OS=Mycobacterium smegmatis GN=tuf PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.910e-27
Identity = 87/248 (35.08%), Postives = 133/248 (53.63%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKG-PTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 745
            VN  T GH+ +    +   + +    +  ++N+ R+F     +D    ER+RGITI+I+  +++T K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK DA      +   + +  EV   L    ++ E+ P V +S     EGD          W K    L++A+D +I +P R +DKP  +P++DV+ I G GTV  GRVE GV+
Sbjct:   13 VNIGTIGHVDHGKTTLTAAITKVLHDKFPDLNESRAFDQ---IDNAPEERQRGITINISHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDAVD---DEELIELVEMEVRELLAAQDFD-EEAPVVRVSALKALEGDP--------KWVKSVEELMEAVDASIPDPVRETDKPFLMPVEDVFTITGRGTVVTGRVERGVI 238          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_MYCHP (Elongation factor Tu OS=Mycoplasma hominis (strain ATCC 23114 / IFO 14850 / NCTC 10111 / PG21) GN=tuf PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.910e-27
Identity = 73/206 (35.44%), Postives = 113/206 (54.85%), Query Frame = 2
Query:  143 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 748
            +D    E+ RGITI+ +  +++T K +   +D PGH D++KNMITG +Q D A+L++ +T G          QTREH LLA  +GV +++   NK+D       +     +  +V S L + G++ +  P +    +   +GD   E+           L+DA+D  I EPKR +DKP  + ++DV+ I G GTV  GRVE GVL+
Sbjct:   50 IDNAPEEKARGITINTSHIEYQTEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVPKIVVFLNKIDMFKDDEREEMVGLVEMDVRSLLSEYGFDGDNAPIIAGSALKALQGDPEYEKGI-------LELMDAVDTYIEEPKRETDKPFLMAVEDVFTITGRGTVATGRVERGVLQ 241          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_CORGL (Elongation factor Tu OS=Corynebacterium glutamicum GN=tuf PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.910e-27
Identity = 88/249 (35.34%), Postives = 130/249 (52.21%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDAL----DNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 745
            VN  T GH+ +        + +       E+N+ +F +  + DK   E+ERGITI+I+  +++T K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK D       +   + +  EV   L +  Y+ E+ P V IS     EGD          W  G  +L+ +    DNI +P R +DKP  +P++D++ I G GTV  GRVE G L
Sbjct:   13 VNIGTIGHVDHGKTTTTAAITKVLADTYPELNE-AFAFDSI-DKAPEEKERGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKCDMVE---DEEIIELVEMEVRELLAEQDYD-EEAPIVHISALKALEGDE--------KW--GKQILELMQACDDNIPDPVRETDKPFLMPIEDIFTITGRGTVVTGRVERGTL 238          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_CORGB (Elongation factor Tu OS=Corynebacterium glutamicum (strain R) GN=tuf PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.910e-27
Identity = 88/249 (35.34%), Postives = 130/249 (52.21%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDAL----DNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 745
            VN  T GH+ +        + +       E+N+ +F +  + DK   E+ERGITI+I+  +++T K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK D       +   + +  EV   L +  Y+ E+ P V IS     EGD          W  G  +L+ +    DNI +P R +DKP  +P++D++ I G GTV  GRVE G L
Sbjct:   13 VNIGTIGHVDHGKTTTTAAITKVLADAYPELNE-AFAFDSI-DKAPEEKERGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKCDMVE---DEEIIELVEMEVRELLAEQDYD-EEAPIVHISALKALEGDE--------KW--GKQILELMQACDDNIPDPVRETDKPFLMPIEDIFTITGRGTVVTGRVERGTL 238          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: CYSN_CHRVO (Sulfate adenylyltransferase subunit 1 OS=Chromobacterium violaceum GN=cysN PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.910e-27
Identity = 85/265 (32.08%), Postives = 133/265 (50.19%), Query Frame = 2
Query:   26 ATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG*QLR 793
            +T  G L++     D ++I  FE + A + + S KY         A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S ++ A+++ID+  G          QTR H+ +   LG++ +I   NKMD     YS+  Y+ I  E  ++ + +  +   + FVPIS   GDN++ R+    WY+G TL+  L+ +           RLP+Q V +         G + +G + PG  V   PSG + R
Sbjct:   38 STLIGRLLH-----DSKLI--FEDQLAAIERDSKKYNTTDQDIDLALLVDGLQAEREQGITIDVAYRYFSTDKRKFIIADCPGHEQYTRNMATGASTSNLAIILIDARRG-------VQTQTRRHSYIVSLLGIRHVIVAVNKMDLV--DYSEDVYNRIRDEYLTFAEHL--DIPDIHFVPISALRGDNVVSRTEAAPWYQGATLMHLLETVQISHDAPLSAFRLPVQYVNRPNLDFRGFCGTIASGAVHPGDAVVALPSGKESR 284          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_SULMW (Elongation factor Tu OS=Sulcia muelleri (strain GWSS) GN=tuf PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.495e-27
Identity = 81/248 (32.66%), Postives = 127/248 (51.21%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            +N  T GH+ +    +   + +   K+   + K        +D    E+ERGITI+ +  +++T   +   +D PGH D++KNM+TG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK+D    K       E+V+ E+   L K  Y+ E +P +     +G  +   +    W K   TL+  +DN I EP R  DKP  +P++DV+ I G GTV  GR+ETG +  G
Sbjct:   13 LNIGTIGHVDHGKTTLTASITKVLAKKGLAVAKEFSS----IDNAPEEKERGITINTSHVEYQTEIRHYAHVDCPGHADYVKNMVTGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVPNLVVFMNKVDQVDDK----EILELVEIEIRELLSKYEYDGENIPII-----QGSALGALNGEKKWEKQIETLMKTVDNYIKEPIRNIDKPFLMPIEDVFTITGRGTVATGRIETGTINTG 240          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_STRAU (Elongation factor Tu OS=Streptomyces aureofaciens GN=tuf1 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.495e-27
Identity = 84/250 (33.60%), Postives = 127/250 (50.80%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDALDNINE----PKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 748
            VN  T GH+ +    +   + +    +  ++N  S      +DK   ER+RGITI IA  +++T   +   +D PGH D+IKNMITG +Q D A+L++ +T G          QT+EH LLA  +GV  ++   NK D       +   + +  EV   L +  +  + +P V +S     EGD         +W  G  LL  +D ++E    P R +DKP  +P++DV+ I G GTV  GR+E GVLK
Sbjct:   13 VNIGTIGHIDHGKTTLTAAITKVLHDKYPDLNAASAFDQ--IDKAPEERQRGITISIAHVEYQTEARHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQVGVPYIVVALNKADMVD---DEEILELVELEVRELLSEYDFPGDDLPVVQVSALKALEGDK--------EW--GDKLLGLMDAVDEAIPTPPRDTDKPFLMPVEDVFTITGRGTVVTGRIERGVLK 240          
The following BLAST results are available for this feature:
BLAST of EY659410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU2_ORITB1.463e-2738.35Elongation factor Tu 2 OS=Orientia tsutsugamushi (... [more]
EFTU_SOLUE1.910e-2732.93Elongation factor Tu OS=Solibacter usitatus (strai... [more]
EFTU_NOCSJ1.910e-2731.73Elongation factor Tu OS=Nocardioides sp. (strain B... [more]
EFTU_MYCS21.910e-2735.08Elongation factor Tu OS=Mycobacterium smegmatis GN... [more]
EFTU_MYCHP1.910e-2735.44Elongation factor Tu OS=Mycoplasma hominis (strain... [more]
EFTU_CORGL1.910e-2735.34Elongation factor Tu OS=Corynebacterium glutamicum... [more]
EFTU_CORGB1.910e-2735.34Elongation factor Tu OS=Corynebacterium glutamicum... [more]
CYSN_CHRVO1.910e-2732.08Sulfate adenylyltransferase subunit 1 OS=Chromobac... [more]
EFTU_SULMW2.495e-2732.66Elongation factor Tu OS=Sulcia muelleri (strain GW... [more]
EFTU_STRAU2.495e-2733.60Elongation factor Tu OS=Streptomyces aureofaciens ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-G12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659410 ID=EY659410; Name=EY659410; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGCGACTCTGGTAAACGCAACCACCACCGGACACTTGATCT
ACAAGCTTGGTGGTATTGACAAGCGTGTGATCGAGAGGTTCGAGAAGGAA
GCTGCTGAGATGAACAAGAGGTCATTCAAGTATGCCTGGGTGCTCGACAA
GCTCAAGGCTGAGCGTGAACGTGGTATTACCATTGATATTGCCTTGTGGA
AGTTCGAGACCACCAAGTACTACTGCACCGTCATTGATGCTCCTGGACAT
CGTGACTTTATCAAGAACATGATTACCGGTACCTCACAGGCTGACTGTGC
CGTCCTTATCATTGACTCCACCACCGGTGGTTTTGAAGCTGGTATCTCCA
AGGATGGTCAGACTCGTGAGCATGCTTTGCTTGCTTTCACCCTTGGTGTG
AAGCAGATGATTTGCTGCTGTAACAAGATGGACGCCACCACCCCCAAGTA
CTCAAAGGCTAGGTACGATGAAATTGTGAAGGAGGTCTCTTCCTACCTGA
AGAAGGTTGGATACAACCCCGAGAAAGTCCCATTCGTGCCCATCTCTGGT
TTCGAGGGTGACAACATGATTGAGAGGTCTACCAACCTTGACTGGTACAA
GGGTCCAACCCTGCTGGATGCTCTTGACAATATCAATGAGCCGAAGAGGC
CCTCAGACAAGCCCCTTCGTCTGCCACTCCAGGACGTGTACAAGATTGGT
GGCATTGGAACCGTCCCAGTGGGTCGCGTTGAGACCGGTGTCCTCAAGCC
TGGTATGGTGGTGACATTTGGCCCCTCTGGATGACAACTGAGGNTAAGTC
TNGTGAGATGCACACGAAGCTCTGCAGGAGGCCCTTCGGGTGACATGNTG
GCTTCACGTGAAGAACGTGCTGTCAAGATCTCAGCGTG
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