EY659410

Overview
NameEY659410
Unique NameEY659410
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2169 contig Csv1_Contig2169:136..1023. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_STRA5 (Elongation factor Tu OS=Streptococcus agalactiae serotype V GN=tuf PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.256e-27
Identity = 83/251 (33.07%), Postives = 127/251 (50.60%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDN-----MIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 748
            VN  T GH+ +    +   +     +       +   YA + D    ERERGITI+ A  ++ET K +   IDAPGH D++KNMITG +Q D A+L++ ST G          QTREH LL+  +GVK +I   NK+D       +   + +  E+   L +  +  + +P +    +   EGD      ++E  + +D Y           I EP+R +DKPL LP++DV+ I G GTV  GR++ G ++
Sbjct:   13 VNIGTIGHVDHGKTTLTAAITTVLARRLPTSVNQPKDYASI-DAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDEKYEDIIMELMSTVDEY-----------IPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGTVR 241          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_STRA3 (Elongation factor Tu OS=Streptococcus agalactiae serotype III GN=tuf PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.256e-27
Identity = 83/251 (33.07%), Postives = 127/251 (50.60%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDN-----MIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 748
            VN  T GH+ +    +   +     +       +   YA + D    ERERGITI+ A  ++ET K +   IDAPGH D++KNMITG +Q D A+L++ ST G          QTREH LL+  +GVK +I   NK+D       +   + +  E+   L +  +  + +P +    +   EGD      ++E  + +D Y           I EP+R +DKPL LP++DV+ I G GTV  GR++ G ++
Sbjct:   13 VNIGTIGHVDHGKTTLTAAITTVLARRLPTSVNQPKDYASI-DAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDEKYEDIIMELMSTVDEY-----------IPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGTVR 241          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_STRA1 (Elongation factor Tu OS=Streptococcus agalactiae serotype Ia GN=tuf PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.256e-27
Identity = 83/251 (33.07%), Postives = 127/251 (50.60%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDN-----MIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 748
            VN  T GH+ +    +   +     +       +   YA + D    ERERGITI+ A  ++ET K +   IDAPGH D++KNMITG +Q D A+L++ ST G          QTREH LL+  +GVK +I   NK+D       +   + +  E+   L +  +  + +P +    +   EGD      ++E  + +D Y           I EP+R +DKPL LP++DV+ I G GTV  GR++ G ++
Sbjct:   13 VNIGTIGHVDHGKTTLTAAITTVLARRLPTSVNQPKDYASI-DAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDEKYEDIIMELMSTVDEY-----------IPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGTVR 241          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_RENSM (Elongation factor Tu OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=tuf PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.256e-27
Identity = 84/248 (33.87%), Postives = 127/248 (51.21%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIE-RFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG---FEGDNMIERSTNLDWYKG-PTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 745
            VN  T GH+ +    +   + +  ++K      +R F     +D    E++RGITI+I+  +++T K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK D       +   D +  EV   L    ++ +  P V +SG    EGD          W K    L++A+D ++ +P R  DKP  +P++DV+ I G GTV  GR E G L
Sbjct:   13 VNIGTIGHVDHGKTTLTAAISKVLYDKYPTLNEQRDFAS---IDSAPEEKQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPM-------AQTREHVLLARQVGVPYLLVALNKSDMVE---DEELLDLVEMEVRELLSSQEFDGDNAPVVRVSGLKALEGDP--------QWVKSVEDLMEAVDESVPDPIRDKDKPFLMPIEDVFTITGRGTVVTGRAERGTL 239          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_PLARO (Elongation factor Tu OS=Planobispora rosea GN=tuf PE=3 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 4.256e-27
Identity = 83/245 (33.88%), Postives = 126/245 (51.43%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRS-FKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 748
            +N  T GH+ +    +   + +       E+NK + F     +DK   E+ RGITI IA  +++T K +   +D PGH D++KNMITG +Q D A+L++ +T G          QT+EH LLA  +GV  ++   NK D    +      +  V+E+ S  +  G +   V    +   EGD     S          L++A+D NI EP R +DKP  +P++DV+ I G GTV  GR+E GV+K
Sbjct:   13 MNIGTIGHIDHGKTTLTAAITKVLHDRYPELNKATPFDK---IDKAPEEKARGITISIAHVEYQTEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQVGVPYIVVALNKADMVDDEEILELVELEVRELLSAQEFPGDDLPVVRVSALKALEGDEKWADSI-------IELMNAVDENIPEPPRDTDKPFLMPIEDVFSITGRGTVVTGRIERGVVK 240          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_MYCVP (Elongation factor Tu OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=tuf PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.256e-27
Identity = 85/248 (34.27%), Postives = 132/248 (53.23%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKG-PTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 745
            VN  T GH+ +    +   + +    +  ++N+ R+F     +D    ER+RGITI+I+  +++T K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK D       +   + +  EV   L    ++ E+ P V +S     EGD          W K    L++A+D +I +P R +DKP  +P++DV+ I G GTV  GRVE G++
Sbjct:   13 VNIGTIGHVDHGKTTLTAAITKVLHDKYPDLNESRAFDQ---IDNAPEERQRGITINISHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADMVD---DEELIELVEMEVRELLAAQDFD-EEAPVVKVSALKALEGDE--------KWVKSVEELMEAVDESIPDPVRETDKPFLMPVEDVFTITGRGTVVTGRVERGII 238          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_MYCLE (Elongation factor Tu OS=Mycobacterium leprae GN=tuf PE=3 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 4.256e-27
Identity = 88/248 (35.48%), Postives = 131/248 (52.82%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPT-LLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 745
            VN  T GH+ +    +   + +    +   +N+ R+F     +D    ER+RGITI+I+  +++T K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK DA      +   + +  EV   L    ++ E  P V +S     EGD          W +  T L+DA+D +I  P R +DKP  +P++DV+ I G GTV  GRVE GV+
Sbjct:   13 VNIGTIGHVDHGKTTLTAAITKVLHDKFPNLNESRAFDQ---IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDAVD---DEELLELVEMEVRELLAAQEFD-EDAPVVRVSALKALEGD--------AKWVESVTQLMDAVDESIPAPVRETDKPFLMPVEDVFTITGRGTVVTGRVERGVV 238          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_MYCLB (Elongation factor Tu OS=Mycobacterium leprae (strain Br4923) GN=tuf PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.256e-27
Identity = 88/248 (35.48%), Postives = 131/248 (52.82%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPT-LLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 745
            VN  T GH+ +    +   + +    +   +N+ R+F     +D    ER+RGITI+I+  +++T K +   +DAPGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  ++   NK DA      +   + +  EV   L    ++ E  P V +S     EGD          W +  T L+DA+D +I  P R +DKP  +P++DV+ I G GTV  GRVE GV+
Sbjct:   13 VNIGTIGHVDHGKTTLTAAITKVLHDKFPNLNESRAFDQ---IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDAVD---DEELLELVEMEVRELLAAQEFD-EDAPVVRVSALKALEGD--------AKWVESVTQLMDAVDESIPAPVRETDKPFLMPVEDVFTITGRGTVVTGRVERGVV 238          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_LEPBP (Elongation factor Tu OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=tuf PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.256e-27
Identity = 80/244 (32.79%), Postives = 121/244 (49.59%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 748
            +N  T GH+ +    +   +     K     NK +  Y  + D    E+ RGITI  +  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +T G          QT+EH LLA  +GV  ++   NK D           + + +E+   L K  +  +K PF  ISG     +    ++L       L++A+D  +  P R  DKP  +P++DV+ I G GTV  GRVE GVLK
Sbjct:   13 LNIGTIGHVDHGKTTLTAAITTTLAKLVGGKNK-AIAYDQI-DNAPEEKARGITIATSHQEYETPNRHYAHVDCPGHADYVKNMITGAAQMDAAILVVSATDGAMP-------QTKEHILLARQVGVPYIVVYLNKADMLAADERDDMVEMVKEEIKDLLNKYNFPGDKTPF--ISGSALKALEGEDSDLGMKSILKLMEAVDTYVPNPTRIVDKPFLMPVEDVFSITGRGTVATGRVEQGVLK 245          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_LEPBA (Elongation factor Tu OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=tuf PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.256e-27
Identity = 80/244 (32.79%), Postives = 121/244 (49.59%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 748
            +N  T GH+ +    +   +     K     NK +  Y  + D    E+ RGITI  +  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +T G          QT+EH LLA  +GV  ++   NK D           + + +E+   L K  +  +K PF  ISG     +    ++L       L++A+D  +  P R  DKP  +P++DV+ I G GTV  GRVE GVLK
Sbjct:   13 LNIGTIGHVDHGKTTLTAAITTTLAKLVGGKNK-AIAYDQI-DNAPEEKARGITIATSHQEYETPNRHYAHVDCPGHADYVKNMITGAAQMDAAILVVSATDGAMP-------QTKEHILLARQVGVPYIVVYLNKADMLAADERDDMVEMVKEEIKDLLNKYNFPGDKTPF--ISGSALKALEGEDSDLGMKSILKLMEAVDTYVPNPTRIVDKPFLMPVEDVFSITGRGTVATGRVEQGVLK 245          
The following BLAST results are available for this feature:
BLAST of EY659410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_STRA54.256e-2733.07Elongation factor Tu OS=Streptococcus agalactiae s... [more]
EFTU_STRA34.256e-2733.07Elongation factor Tu OS=Streptococcus agalactiae s... [more]
EFTU_STRA14.256e-2733.07Elongation factor Tu OS=Streptococcus agalactiae s... [more]
EFTU_RENSM4.256e-2733.87Elongation factor Tu OS=Renibacterium salmoninarum... [more]
EFTU_PLARO4.256e-2733.88Elongation factor Tu OS=Planobispora rosea GN=tuf ... [more]
EFTU_MYCVP4.256e-2734.27Elongation factor Tu OS=Mycobacterium vanbaalenii ... [more]
EFTU_MYCLE4.256e-2735.48Elongation factor Tu OS=Mycobacterium leprae GN=tu... [more]
EFTU_MYCLB4.256e-2735.48Elongation factor Tu OS=Mycobacterium leprae (stra... [more]
EFTU_LEPBP4.256e-2732.79Elongation factor Tu OS=Leptospira biflexa serovar... [more]
EFTU_LEPBA4.256e-2732.79Elongation factor Tu OS=Leptospira biflexa serovar... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-G12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659410 ID=EY659410; Name=EY659410; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGCGACTCTGGTAAACGCAACCACCACCGGACACTTGATCT
ACAAGCTTGGTGGTATTGACAAGCGTGTGATCGAGAGGTTCGAGAAGGAA
GCTGCTGAGATGAACAAGAGGTCATTCAAGTATGCCTGGGTGCTCGACAA
GCTCAAGGCTGAGCGTGAACGTGGTATTACCATTGATATTGCCTTGTGGA
AGTTCGAGACCACCAAGTACTACTGCACCGTCATTGATGCTCCTGGACAT
CGTGACTTTATCAAGAACATGATTACCGGTACCTCACAGGCTGACTGTGC
CGTCCTTATCATTGACTCCACCACCGGTGGTTTTGAAGCTGGTATCTCCA
AGGATGGTCAGACTCGTGAGCATGCTTTGCTTGCTTTCACCCTTGGTGTG
AAGCAGATGATTTGCTGCTGTAACAAGATGGACGCCACCACCCCCAAGTA
CTCAAAGGCTAGGTACGATGAAATTGTGAAGGAGGTCTCTTCCTACCTGA
AGAAGGTTGGATACAACCCCGAGAAAGTCCCATTCGTGCCCATCTCTGGT
TTCGAGGGTGACAACATGATTGAGAGGTCTACCAACCTTGACTGGTACAA
GGGTCCAACCCTGCTGGATGCTCTTGACAATATCAATGAGCCGAAGAGGC
CCTCAGACAAGCCCCTTCGTCTGCCACTCCAGGACGTGTACAAGATTGGT
GGCATTGGAACCGTCCCAGTGGGTCGCGTTGAGACCGGTGTCCTCAAGCC
TGGTATGGTGGTGACATTTGGCCCCTCTGGATGACAACTGAGGNTAAGTC
TNGTGAGATGCACACGAAGCTCTGCAGGAGGCCCTTCGGGTGACATGNTG
GCTTCACGTGAAGAACGTGCTGTCAAGATCTCAGCGTG
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