EY659410

Overview
NameEY659410
Unique NameEY659410
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2169 contig Csv1_Contig2169:136..1023. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_BRUC2 (Elongation factor Tu OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.256e-27
Identity = 84/247 (34.01%), Postives = 126/247 (51.01%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            VN  T GH+ +    +   + + F +         FK    +D    ER RGITI  A  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  ++   NK D    +   A   E+V+ EV   L K  +  +++P +  S      + + S  L       L+DA+D+ I  P+RP D+P  +P++DV+ I G GTV  GRVE G++K G
Sbjct:   13 VNIGTIGHVDHGKTSLTAAITKFFGE---------FKAYDQIDAAPEERARGITISTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPAIVVFLNKCD----QVDDAELLELVELEVRELLSKYEFPGDEIPIIKGSALAA--LEDSSKELGEDAIRNLMDAVDSYIPTPERPIDQPFLMPIEDVFSISGRGTVVTGRVERGIVKVG 237          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_BRUA2 (Elongation factor Tu OS=Brucella abortus (strain 2308) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.256e-27
Identity = 84/247 (34.01%), Postives = 126/247 (51.01%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            VN  T GH+ +    +   + + F +         FK    +D    ER RGITI  A  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  ++   NK D    +   A   E+V+ EV   L K  +  +++P +  S      + + S  L       L+DA+D+ I  P+RP D+P  +P++DV+ I G GTV  GRVE G++K G
Sbjct:   13 VNIGTIGHVDHGKTSLTAAITKFFGE---------FKAYDQIDAAPEERARGITISTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPAIVVFLNKCD----QVDDAELLELVELEVRELLSKYEFPGDEIPIIKGSALAA--LEDSSKELGEDAIRNLMDAVDSYIPTPERPIDQPFLMPIEDVFSISGRGTVVTGRVERGIVKVG 237          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_ANADE (Elongation factor Tu OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.256e-27
Identity = 85/249 (34.14%), Postives = 124/249 (49.80%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            VN  T GH+ +    +   +     K  A+     F     +DK   ERERGITI  A  +++T K +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  ++   NK+D       K   D +  EV   L +  +   ++P V    +   EGD        L       L++A+D  I  P+R +DKP  +P++DV+ I G GTV  GRVE G++K G
Sbjct:   13 VNVGTIGHVDHGKTTLTAAIT----KVLAQKGGAQFLAYDQIDKAPEERERGITIATAHVEYQTEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKVDMVD---DKELLDLVELEVRELLSEYDFPGNEIPIVKGSALKALEGD-----KGELGEQAIFKLMEAVDAYIPTPQRATDKPFLMPVEDVFSISGRGTVATGRVERGIVKVG 242          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU2_DESPS (Elongation factor Tu 2 OS=Desulfotalea psychrophila GN=tuf2 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.256e-27
Identity = 85/253 (33.60%), Postives = 129/253 (50.99%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKV----GYNPEKVPFVPISGFEGDNMIERSTNLDWYKGP---TLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            VN  T GH+ +    +   +     +  +   + SF     +DK   E+ERGITI  A  ++ET   +   +D PGH D+IKNMITG +Q D A+L++ +T G          QTREH LLA  +GV  M+   NK D           DE+++ V   L+++     +  + VPF+      G  ++      D  K      L++A+D+ I EP+R  D+P  +P++DV+ I G GTV  GRVE G++K G
Sbjct:   13 VNVGTIGHIDHGKTTLTAAIT----RVLSTKGQASFTDFSDIDKAPEEKERGITIATAHVEYETVNRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGAMP-------QTREHILLARQVGVPAMVVFLNKCDMVDD-------DELIELVEMELRELLDDYEFPGDDVPFI-----HGSALLALENPEDEDKAACIWALMEAIDSYIPEPERDVDQPFLMPVEDVFSISGRGTVATGRVERGIIKVG 242          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTM_ARATH (Elongation factor Tu, mitochondrial OS=Arabidopsis thaliana GN=TUFA PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.256e-27
Identity = 84/247 (34.01%), Postives = 124/247 (50.20%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDN-MIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            VN  T GH+ +    +   +     K  AE  K        +DK   E++RGITI  A  ++ET K +   +D PGH D++KNMITG +Q D  +L++    G          QT+EH LLA  +GV  ++C  NK+D           +  ++E+ S+ K  G +   +    +S  +G N  I R   L       L+DA+D  I +P R  DKP  +P++DV+ I G GTV  GR+E GV+K G
Sbjct:   68 VNVGTIGHVDHGKTTLTAAIT----KVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP-------QTKEHILLARQVGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNDEIGRQAIL------KLMDAVDEYIPDPVRVLDKPFLMPIEDVFSIQGRGTVATGRIEQGVIKVG 297          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: CYSN_FRATN (Sulfate adenylyltransferase subunit 1 OS=Francisella tularensis subsp. novicida (strain U112) GN=cysN PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.256e-27
Identity = 79/217 (36.41%), Postives = 113/217 (52.07%), Query Frame = 2
Query:  134 AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVG-YNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG 781
            A ++D L++ERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+++ID+  G          QTR H+ +   LG+K +I   NKMD  T  YS+  Y  I  E   YLK  G      + FVPIS  +GDN++ +ST + W++G  L+  L+ I      +D+  R P+Q V +         G V +G  K G  +   PSG
Sbjct:   76 ALLVDGLQSEREQGITIDVAYRYFSTDKRKFIIADTPGHEQYTRNMATGASNCDLAIILIDARKG-------LQTQTRRHSFICSLLGIKHVIVAVNKMD--TVGYSQQIYKSIQDE---YLKLAGSLQIPDIRFVPISALDGDNVVSKSTKMPWFRGSPLMHYLETIKIDYAHTDE-FRFPVQLVCRPNSEFRGFQGTVVSGSAKIGDTIRVMPSG 279          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_SYNFM (Elongation factor Tu OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.559e-27
Identity = 84/248 (33.87%), Postives = 127/248 (51.21%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 748
            VN  T GH+ +    +   +     K+ A+  +  F     +DK   ERERGITI  A  ++ET K +   +D PGH D+IKNMITG +Q D A+L++ +  G          QTREH LL+  +GV  ++   NK+D            E+V+ E+   L K G+  + VP +    +   E D+     T   +     L++A+D  + +P R  DKP  +P++DV+ I G GTV  GRVE GV++
Sbjct:   13 VNVGTVGHIDHGKTTLTAAIT----KQLAKRGRAEFVPFDQIDKAPEERERGITIATAHVEYETDKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAADDGPMP-------QTREHILLSRQVGVPYIVVFLNKVDMV----DDPELIELVELELRELLSKYGFPGDDVPIIKGSALRALEADDPEHPDTKCIF----ELMEAIDAYVPDPVRDIDKPFLMPIEDVFSISGRGTVVTGRVERGVIR 241          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_STROR (Elongation factor Tu OS=Streptococcus oralis GN=tuf PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.559e-27
Identity = 82/247 (33.20%), Postives = 127/247 (51.42%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 748
            VN  T GH+ +    +   +     +       +   YA + D    ERERGITI+ A  ++ET K +   IDAPGH D++KNMITG +Q D A+L++ ST G          QTREH LL+  +GVK +I   NK+D       +   + +  E+   L +  +  + +P +    +   EGD+  E            L++ +D  I EP+R ++KPL LP++DV+ I G GTV  GR++ G ++
Sbjct:   13 VNIGTIGHVDHGKTTLTAAITTVLARRLPSAVNQPKDYASI-DAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKIDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDSKYEDII-------MELMNTVDEYIPEPERDTEKPLLLPVEDVFSITGRGTVASGRIDRGTVR 241          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_HELMI (Elongation factor Tu OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=tuf PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.559e-27
Identity = 79/219 (36.07%), Postives = 113/219 (51.60%), Query Frame = 2
Query:  104 AEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWY-KGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 754
            +++ K SFK    +D    ERERGITI+ A  ++ET   +   +D PGH D+IKNMITG +Q D A+L++ +  G          QTREH LLA  +GV  ++   NK D           + +  EV   L    +  + +P V  SG +           +W  K   L+D +D  I  P+R +DKP  +P++DV+ I G GTV  GRVE G +K G
Sbjct:   37 SKVGKASFKKYDEIDAAPEERERGITINTAHVEYETDNRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVWLNKADMVD---DPELMELVEMEVRELLSSYEFPGDDIPIVAGSGLKALECGCGKRECEWCGKIWALMDEVDKYIPTPERATDKPFLMPVEDVFTITGRGTVATGRVERGTIKVG 245          
BLAST of EY659410 vs. ExPASy Swiss-Prot
Match: EFTU_FRAAA (Elongation factor Tu OS=Frankia alni (strain ACN14a) GN=tuf PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.559e-27
Identity = 83/250 (33.20%), Postives = 126/250 (50.40%), Query Frame = 2
Query:   20 VNATTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDAL----DNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLK 748
            VN  T GH+ +    +   + +       ++N   F     +DK   E+ RGITI IA  +++T K +   +D PGH D+IKNMITG +Q D A+L++ +T G          QT+EH LLA  +GV  ++   NK D       +   + +  EV   L    +  + VP + +S     EGD         +W  G  LL+ +    D+I EP+R  D+P  +P++DV+ I G GTV  GRVE G++K
Sbjct:   13 VNIGTIGHIDHGKTTLTAAITKVLHDAHPDLNP--FTPFDQIDKAPEEKARGITISIAHVEYQTDKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSATDGPMP-------QTKEHVLLARQVGVPYIVVALNKADMVD---DEEILELVELEVRELLSSYEFPGDDVPVIRVSALKALEGDK--------EW--GAKLLELMAAVDDSIPEPQRDIDRPFLMPIEDVFTITGRGTVVTGRVERGIVK 240          
The following BLAST results are available for this feature:
BLAST of EY659410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_BRUC24.256e-2734.01Elongation factor Tu OS=Brucella canis (strain ATC... [more]
EFTU_BRUA24.256e-2734.01Elongation factor Tu OS=Brucella abortus (strain 2... [more]
EFTU_ANADE4.256e-2734.14Elongation factor Tu OS=Anaeromyxobacter dehalogen... [more]
EFTU2_DESPS4.256e-2733.60Elongation factor Tu 2 OS=Desulfotalea psychrophil... [more]
EFTM_ARATH4.256e-2734.01Elongation factor Tu, mitochondrial OS=Arabidopsis... [more]
CYSN_FRATN4.256e-2736.41Sulfate adenylyltransferase subunit 1 OS=Francisel... [more]
EFTU_SYNFM5.559e-2733.87Elongation factor Tu OS=Syntrophobacter fumaroxida... [more]
EFTU_STROR5.559e-2733.20Elongation factor Tu OS=Streptococcus oralis GN=tu... [more]
EFTU_HELMI5.559e-2736.07Elongation factor Tu OS=Heliobacterium modesticald... [more]
EFTU_FRAAA5.559e-2733.20Elongation factor Tu OS=Frankia alni (strain ACN14... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-G12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659410 ID=EY659410; Name=EY659410; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGCGACTCTGGTAAACGCAACCACCACCGGACACTTGATCT
ACAAGCTTGGTGGTATTGACAAGCGTGTGATCGAGAGGTTCGAGAAGGAA
GCTGCTGAGATGAACAAGAGGTCATTCAAGTATGCCTGGGTGCTCGACAA
GCTCAAGGCTGAGCGTGAACGTGGTATTACCATTGATATTGCCTTGTGGA
AGTTCGAGACCACCAAGTACTACTGCACCGTCATTGATGCTCCTGGACAT
CGTGACTTTATCAAGAACATGATTACCGGTACCTCACAGGCTGACTGTGC
CGTCCTTATCATTGACTCCACCACCGGTGGTTTTGAAGCTGGTATCTCCA
AGGATGGTCAGACTCGTGAGCATGCTTTGCTTGCTTTCACCCTTGGTGTG
AAGCAGATGATTTGCTGCTGTAACAAGATGGACGCCACCACCCCCAAGTA
CTCAAAGGCTAGGTACGATGAAATTGTGAAGGAGGTCTCTTCCTACCTGA
AGAAGGTTGGATACAACCCCGAGAAAGTCCCATTCGTGCCCATCTCTGGT
TTCGAGGGTGACAACATGATTGAGAGGTCTACCAACCTTGACTGGTACAA
GGGTCCAACCCTGCTGGATGCTCTTGACAATATCAATGAGCCGAAGAGGC
CCTCAGACAAGCCCCTTCGTCTGCCACTCCAGGACGTGTACAAGATTGGT
GGCATTGGAACCGTCCCAGTGGGTCGCGTTGAGACCGGTGTCCTCAAGCC
TGGTATGGTGGTGACATTTGGCCCCTCTGGATGACAACTGAGGNTAAGTC
TNGTGAGATGCACACGAAGCTCTGCAGGAGGCCCTTCGGGTGACATGNTG
GCTTCACGTGAAGAACGTGCTGTCAAGATCTCAGCGTG
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