EY659409

Overview
NameEY659409
Unique NameEY659409
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length515
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659409 vs. ExPASy Swiss-Prot
Match: G3P_BUCAI (Glyceraldehyde-3-phosphate dehydrogenase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=gapA PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.499e-24
Identity = 55/143 (38.46%), Postives = 88/143 (61.54%), Query Frame = 3
Query:   87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNENEYKPE 512
            +K+GINGFGRIGR++ R+  +R D+E++A+ND  +  +Y+ YM KYDS HG +K H    KD+  ++   K + V  +++PE++ W +   + V+ESTG+F                V+++ PSK D PMFV G N ++Y+ E
Sbjct:    3 IKVGINGFGRIGRVLFRLAQKRSDIEIIAIND-LLAPEYIAYMLKYDSTHGVFKKHITFDKDN--IIINGKNIRVTSIKDPEKLMWHDLSIDVVIESTGLFLKREQAYKHILAGSKKVVVTGPSKDDIPMFVRGANFHKYQGE 142          
BLAST of EY659409 vs. ExPASy Swiss-Prot
Match: G3P1_SHIFL (Glyceraldehyde-3-phosphate dehydrogenase A OS=Shigella flexneri GN=gapA PE=3 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 3.499e-24
Identity = 59/140 (42.14%), Postives = 85/140 (60.71%), Query Frame = 3
Query:   87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFVVGVNENEY 503
            +K+GINGFGRIGR+V R   +R D+E+VA+ND  +  DYM YM KYDS HG++    ++VKD   ++ G+K + V   R+P  + W E G + V E+TG+F                V+++ PSKD  PMFV G N ++Y
Sbjct:    3 IKVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRF-DGTVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKY 139          
BLAST of EY659409 vs. ExPASy Swiss-Prot
Match: G3P1_SALTY (Glyceraldehyde-3-phosphate dehydrogenase OS=Salmonella typhimurium GN=gapA PE=3 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 3.499e-24
Identity = 58/141 (41.13%), Postives = 86/141 (60.99%), Query Frame = 3
Query:   87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFVVGVNENEYK 506
            +K+GINGFGRIGR+V R   +R D+E+VA+ND  +  +YM YM KYDS HG++    ++VKD   ++ G+K + V   R+P  + W E G + V E+TG+F                V+++ PSKD  PMFV G N ++Y+
Sbjct:    3 IKVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDAEYMAYMLKYDSTHGRF-DGTVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVKGANFDKYE 140          
BLAST of EY659409 vs. ExPASy Swiss-Prot
Match: G3P1_SALTI (Glyceraldehyde-3-phosphate dehydrogenase OS=Salmonella typhi GN=gapA PE=3 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 3.499e-24
Identity = 58/141 (41.13%), Postives = 86/141 (60.99%), Query Frame = 3
Query:   87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFVVGVNENEYK 506
            +K+GINGFGRIGR+V R   +R D+E+VA+ND  +  +YM YM KYDS HG++    ++VKD   ++ G+K + V   R+P  + W E G + V E+TG+F                V+++ PSKD  PMFV G N ++Y+
Sbjct:    3 IKVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDAEYMAYMLKYDSTHGRF-DGTVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVKGANFDKYE 140          
BLAST of EY659409 vs. ExPASy Swiss-Prot
Match: G3P1_ECOLI (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia coli (strain K12) GN=gapA PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 3.499e-24
Identity = 59/140 (42.14%), Postives = 85/140 (60.71%), Query Frame = 3
Query:   87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFVVGVNENEY 503
            +K+GINGFGRIGR+V R   +R D+E+VA+ND  +  DYM YM KYDS HG++    ++VKD   ++ G+K + V   R+P  + W E G + V E+TG+F                V+++ PSKD  PMFV G N ++Y
Sbjct:    3 IKVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRF-DGTVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKY 139          
BLAST of EY659409 vs. ExPASy Swiss-Prot
Match: G3P1_ECOL6 (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia coli O6 GN=gapA PE=3 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 3.499e-24
Identity = 59/140 (42.14%), Postives = 85/140 (60.71%), Query Frame = 3
Query:   87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFVVGVNENEY 503
            +K+GINGFGRIGR+V R   +R D+E+VA+ND  +  DYM YM KYDS HG++    ++VKD   ++ G+K + V   R+P  + W E G + V E+TG+F                V+++ PSKD  PMFV G N ++Y
Sbjct:    3 IKVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRF-DGTVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKY 139          
BLAST of EY659409 vs. ExPASy Swiss-Prot
Match: G3P1_ECO57 (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia coli O157:H7 GN=gapA PE=3 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 3.499e-24
Identity = 59/140 (42.14%), Postives = 85/140 (60.71%), Query Frame = 3
Query:   87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFVVGVNENEY 503
            +K+GINGFGRIGR+V R   +R D+E+VA+ND  +  DYM YM KYDS HG++    ++VKD   ++ G+K + V   R+P  + W E G + V E+TG+F                V+++ PSKD  PMFV G N ++Y
Sbjct:    3 IKVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRF-DGTVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKY 139          
BLAST of EY659409 vs. ExPASy Swiss-Prot
Match: G3P_BUCAP (Glyceraldehyde-3-phosphate dehydrogenase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=gapA PE=3 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 5.969e-24
Identity = 57/143 (39.86%), Postives = 93/143 (65.03%), Query Frame = 3
Query:   87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNENEYKPE 512
            +KIGINGFGRIGR++ R+  +R+++E+VA+ND  +   Y+ YM KYDS HG +K  +++VK++  ++ G+K + +  +++PE++ W +   + V+ESTG+F                V+I+ PSK D PMFV G N ++YK E
Sbjct:    3 IKIGINGFGRIGRVLFRLAQERENIEVVAIND-LLDPKYIAYMLKYDSTHGNFK-KDIEVKNNNLIINGKK-IRITSIKDPEKLMWDKLLIDVVIESTGLFLTKDTAYKHILSGAKKVVITGPSKDDIPMFVRGANFDKYKGE 142          
BLAST of EY659409 vs. ExPASy Swiss-Prot
Match: G3P_AQUAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Aquifex aeolicus GN=gap PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.268e-23
Identity = 58/143 (40.56%), Postives = 88/143 (61.54%), Query Frame = 3
Query:   87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVV-GVNENEYKPE 512
            +K+GINGFGRIGR   R    R+++E+VA+ND      ++ ++ KYDSVHG +K   ++ KDD  ++ G K + VF  ++P +IPW + G + V+E+TGVF                VII+AP+K+  + VV GVNE +Y P+
Sbjct:    3 IKVGINGFGRIGRSFFRASWGREEIEIVAIND-LTDAKHLAHLLKYDSVHGIFK-GSVEAKDDSIVVDG-KEIKVFAQKDPSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAKNPDITVVLGVNEEKYNPK 142          
BLAST of EY659409 vs. ExPASy Swiss-Prot
Match: G3P_CHLPN (Glyceraldehyde-3-phosphate dehydrogenase OS=Chlamydia pneumoniae GN=gap PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.869e-23
Identity = 59/144 (40.97%), Postives = 89/144 (61.81%), Query Frame = 3
Query:   87 VKIGINGFGRIGRLVARVILQRD-DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNENEYKPE 512
            +K+ INGFGRIGRLV R IL+R+  VE++A+ND  +  D +TY+FK+DS HG++   +++ + D  L+ G++ +     RN + +PW + G + V+E TG+FT               V+ISAP K D P FV+GVN   + PE
Sbjct:    1 MKVVINGFGRIGRLVLRQILKRNSSVEVLAIND-LVPGDALTYLFKFDSTHGRFP-EDVRCEADH-LIVGKRKIQFLSERNVQNLPWKDLGVDLVIECTGLFTKKEDAEKHIQAGAKRVLISAPGKGDIPTFVMGVNHKTFNPE 141          
The following BLAST results are available for this feature:
BLAST of EY659409 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 312
Match NameE-valueIdentityDescription
G3P_BUCAI3.499e-2438.46Glyceraldehyde-3-phosphate dehydrogenase OS=Buchne... [more]
G3P1_SHIFL3.499e-2442.14Glyceraldehyde-3-phosphate dehydrogenase A OS=Shig... [more]
G3P1_SALTY3.499e-2441.13Glyceraldehyde-3-phosphate dehydrogenase OS=Salmon... [more]
G3P1_SALTI3.499e-2441.13Glyceraldehyde-3-phosphate dehydrogenase OS=Salmon... [more]
G3P1_ECOLI3.499e-2442.14Glyceraldehyde-3-phosphate dehydrogenase A OS=Esch... [more]
G3P1_ECOL63.499e-2442.14Glyceraldehyde-3-phosphate dehydrogenase A OS=Esch... [more]
G3P1_ECO573.499e-2442.14Glyceraldehyde-3-phosphate dehydrogenase A OS=Esch... [more]
G3P_BUCAP5.969e-2439.86Glyceraldehyde-3-phosphate dehydrogenase OS=Buchne... [more]
G3P_AQUAE2.268e-2340.56Glyceraldehyde-3-phosphate dehydrogenase OS=Aquife... [more]
G3P_CHLPN3.869e-2340.97Glyceraldehyde-3-phosphate dehydrogenase OS=Chlamy... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-G11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659409 ID=EY659409; Name=EY659409; organism=Citrus sinensis; type=EST; length=515bp
CCACGCGTCCGGCTCTCCCTACTCTCTACAACTTTCTTCACCACTCTTTC
ACCGCTCAATTTCATCTCTCGAGAATCATGGGGAAGGTCAAGATCGGAAT
CAACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCAGA
GGGACGATGTTGAACTCGTTGCTGTTAATGATCCCTTTATCACAACCGAT
TACATGACATACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAGCA
CCATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAAGC
CTGTCACTGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTGAG
ACTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACTGACAAGGA
TAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTCAG
CCCCCAGCAAGGATGCTCCTATGTTTGTTGTCGGTGTCAATGAAAACGAG
TACAAACCAGAGCTC
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