EY659409

Overview
NameEY659409
Unique NameEY659409
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length515
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659409 vs. ExPASy Swiss-Prot
Match: G3PG_TRYCR (Glyceraldehyde-3-phosphate dehydrogenase, glycosomal OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 5.053e-23
Identity = 59/153 (38.56%), Postives = 86/153 (56.21%), Query Frame = 3
Query:   87 VKIGINGFGRIGRLVARVI----LQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVK-------DDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVVGVNENEYKP 509
            +K+GINGFGRIGR+V + +    L   ++++VAV D     +Y  Y  +YD+VHG++K+     K       DD  ++ G + + V   RNP ++PW + G EYV+ESTG+FT               V+ISAP S  A   V+GVN +EY P
Sbjct:    3 IKVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYEVTTTKSSPSVAKDDTLVVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPASGGAKTLVMGVNHHEYNP 155          
BLAST of EY659409 vs. ExPASy Swiss-Prot
Match: G3PC_LEIME (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Leishmania mexicana GN=GAPC PE=3 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 5.053e-23
Identity = 59/141 (41.84%), Postives = 78/141 (55.32%), Query Frame = 3
Query:   87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNENEYK 506
            VK+GINGFGRIGR+V R    R D+E+V +ND  +  +YM Y  KYDS HG++      +K    L+   K + V   R+P  + W E G E VVESTG+F                V+++ P K D PMFV+GVN   YK
Sbjct:    2 VKVGINGFGRIGRVVFRAAQMRPDIEIVGIND-LLDAEYMAYSLKYDSTHGRFDGTVEVIKG--ALVVNGKSIRVTSERDPANLKWDEIGVEVVVESTGLFLTQETAHKHIEAGARRVVMTGPPKDDTPMFVMGVNHTTYK 139          
BLAST of EY659409 vs. ExPASy Swiss-Prot
Match: G3P_BUCBP (Glyceraldehyde-3-phosphate dehydrogenase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=gapA PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 6.600e-23
Identity = 56/140 (40.00%), Postives = 86/140 (61.43%), Query Frame = 3
Query:   87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFVVGVNENEY 503
            +KIGINGFGRIGR++ R+   R ++E++A+ND  I   Y+ YM KYDS+HG + + ++ +K++ TL    K + +   ++P+ + W +   + V+ESTG+F                VII++P KD  PMFV GVN NEY
Sbjct:    3 IKIGINGFGRIGRVLFRLAQLRSNIEILAIND-LINVQYIAYMLKYDSIHGNF-NGKIVIKNE-TLFVNGKKIRITNEKDPKNLMWGDLNIDVVIESTGIFLTTEDSYKHIQAGAKKVIITSPPKDNTPMFVRGVNFNEY 139          
BLAST of EY659409 vs. ExPASy Swiss-Prot
Match: G3P_BACFR (Glyceraldehyde-3-phosphate dehydrogenase OS=Bacteroides fragilis GN=gap PE=3 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 1.920e-22
Identity = 59/142 (41.55%), Postives = 86/142 (60.56%), Query Frame = 3
Query:   87 VKIGINGFGRIGRLVARVILQR--DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDA-PMFVVGVNENEY 503
            +K+GINGFGRIGR+V R  ++   +D+++V +ND  +  +Y+ YM KYDSVHG+++  E+ V+D   ++ G K + +    +P  + W E  A+ VVESTG F                VI+SAPSKD+ PMFV GVN   Y
Sbjct:    2 IKVGINGFGRIGRMVFRAAVKNFGNDIQIVGIND-LLDAEYLAYMLKYDSVHGRFE-GEVAVEDGALIVNGNK-IRLTAEMDPANLKWNEVDADVVVESTGFFLTDETARKHIQAGAKKVIMSAPSKDSTPMFVYGVNHTSY 140          
BLAST of EY659409 vs. ExPASy Swiss-Prot
Match: G3P_CHLTR (Glyceraldehyde-3-phosphate dehydrogenase OS=Chlamydia trachomatis GN=gap PE=3 SV=3)

HSP 1 Score: 104.375 bits (259), Expect = 3.275e-22
Identity = 58/143 (40.56%), Postives = 85/143 (59.44%), Query Frame = 3
Query:   87 VKIGINGFGRIGRLVARVILQRDD-VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNENEYKP 509
            ++I INGFGRIGRLV R IL+R+  +E+VA+ND  +  D +TY+FKYDS HG +         D  L+ GE+ V     ++ +++PW +   + VVESTG+F                V+I+AP+K D P FV+GVN  ++ P
Sbjct:    1 MRIVINGFGRIGRLVLRQILKRNSPIEVVAIND-LVAGDLLTYLFKYDSTHGSFAPQ--ATFSDGCLVMGERKVHFLAEKDVQKLPWKDLDVDVVVESTGLFVNRDDVAKHLDSGAKRVLITAPAKGDVPTFVMGVNHQQFDP 140          
BLAST of EY659409 vs. ExPASy Swiss-Prot
Match: G3P_CHLMU (Glyceraldehyde-3-phosphate dehydrogenase OS=Chlamydia muridarum GN=gap PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.278e-22
Identity = 57/143 (39.86%), Postives = 86/143 (60.14%), Query Frame = 3
Query:   87 VKIGINGFGRIGRLVARVILQRD-DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNENEYKP 509
            ++I INGFGRIGRLV R IL+R+  +E+VA+ND  ++ D +TY+FKYDS HG +         D  L+ GE+ +     ++ +++PW +   + VVESTG+F                V+I+AP+K D P FV+GVN  ++ P
Sbjct:    1 MRIVINGFGRIGRLVLRQILKRNAPIEVVAIND-LVSGDLLTYLFKYDSTHGSFASQ--ATFSDGCLVVGERKIRFLAEKDVQKLPWKDLDVDVVVESTGLFVNKDDAAKHLDSGAKRVLITAPAKGDVPTFVMGVNHQKFDP 140          
BLAST of EY659409 vs. ExPASy Swiss-Prot
Match: G3P_BACME (Glyceraldehyde-3-phosphate dehydrogenase OS=Bacillus megaterium GN=gap PE=3 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 4.278e-22
Identity = 61/140 (43.57%), Postives = 81/140 (57.86%), Query Frame = 3
Query:   87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPM-FVVGVNENEY 503
            VKIGINGFGRIGR V R  L+ D+VE+VA+ND     + + ++ KYDSVHG  K     V D   L+   K + +   R+P ++ W + G E VVESTG FT               VIISAP+ D  +  V+GVNE++Y
Sbjct:    3 VKIGINGFGRIGRNVFRAALKNDNVEVVAIND-LTDANMLAHLLKYDSVHG--KLDAEVVVDGSNLVVNGKTIEISAERDPAQLSWGKQGVEIVVESTGFFTKRADAAKHLEAGAKKVIISAPASDEDITIVMGVNEDKY 139          
BLAST of EY659409 vs. ExPASy Swiss-Prot
Match: G3P_BACST (Glyceraldehyde-3-phosphate dehydrogenase OS=Bacillus stearothermophilus GN=gap PE=1 SV=5)

HSP 1 Score: 103.219 bits (256), Expect = 7.297e-22
Identity = 61/143 (42.66%), Postives = 86/143 (60.14%), Query Frame = 3
Query:   87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPM-FVVGVNENEYKPE 512
            VK+GINGFGRIGR V R  L+  D+E+VAVND     + + ++ KYDSVHG+    E+ V  +  ++ G K + V   R+PE + W E G + VVESTG FT               VIISAP+K+  +  V+GVN+++Y P+
Sbjct:    3 VKVGINGFGRIGRNVFRAALKNPDIEVVAVND-LTDANTLAHLLKYDSVHGR-LDAEVSVNGNNLVVNG-KEIIVKAERDPENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAKNEDITIVMGVNQDKYDPK 142          
BLAST of EY659409 vs. ExPASy Swiss-Prot
Match: G3PG_LEIME (Glyceraldehyde-3-phosphate dehydrogenase, glycosomal OS=Leishmania mexicana GN=GAPG PE=1 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 7.297e-22
Identity = 59/156 (37.82%), Postives = 86/156 (55.13%), Query Frame = 3
Query:   78 MGKVKIGINGFGRIGRLVARVILQRD----DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKD-------DKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVVGVNENEYKP 509
            M  +K+GINGFGRIGR+V + I  +     ++++VAV D     +Y  Y  K+D+VHG+ K+    VK        D  ++ G +   V   RNP ++PW + G +YV+ESTG+FT               V+ISAP S  A   V+GVN++EY P
Sbjct:    1 MAPIKVGINGFGRIGRMVFQAICDQGLIGTEIDVVAVVDMSTNAEYFAYQMKHDTVHGRPKYTVEAVKSSPSVETADVLVVNGHRIKCVKAQRNPADLPWGKLGVDYVIESTGLFTDKLKAEGHIKGGAKKVVISAPASGGAKTIVMGVNQHEYSP 156          
BLAST of EY659409 vs. ExPASy Swiss-Prot
Match: G3P_MYCPN (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycoplasma pneumoniae GN=gapA PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 9.530e-22
Identity = 57/137 (41.61%), Postives = 79/137 (57.66%), Query Frame = 3
Query:   87 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNEN 497
            +++ INGFGRIGRLV R +L + ++E+VAVND     D + ++ KYDS HG++K  +  V  D TL+  +K V VF  ++P  +PWAE   + VVESTG F                VIISAP+K   +  V  N N
Sbjct:    8 IRVAINGFGRIGRLVFRALLSQKNIEIVAVND-LTHPDTLAHLLKYDSAHGEFK--KKVVAKDNTLMIDKKKVLVFSEKDPANLPWAEHNIDIVVESTGRFVSEEGASLHLQAGAKRVIISAPAKQKTIKTVVYNVN 141          
The following BLAST results are available for this feature:
BLAST of EY659409 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 312
Match NameE-valueIdentityDescription
G3PG_TRYCR5.053e-2338.56Glyceraldehyde-3-phosphate dehydrogenase, glycosom... [more]
G3PC_LEIME5.053e-2341.84Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_BUCBP6.600e-2340.00Glyceraldehyde-3-phosphate dehydrogenase OS=Buchne... [more]
G3P_BACFR1.920e-2241.55Glyceraldehyde-3-phosphate dehydrogenase OS=Bacter... [more]
G3P_CHLTR3.275e-2240.56Glyceraldehyde-3-phosphate dehydrogenase OS=Chlamy... [more]
G3P_CHLMU4.278e-2239.86Glyceraldehyde-3-phosphate dehydrogenase OS=Chlamy... [more]
G3P_BACME4.278e-2243.57Glyceraldehyde-3-phosphate dehydrogenase OS=Bacill... [more]
G3P_BACST7.297e-2242.66Glyceraldehyde-3-phosphate dehydrogenase OS=Bacill... [more]
G3PG_LEIME7.297e-2237.82Glyceraldehyde-3-phosphate dehydrogenase, glycosom... [more]
G3P_MYCPN9.530e-2241.61Glyceraldehyde-3-phosphate dehydrogenase OS=Mycopl... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-G11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659409 ID=EY659409; Name=EY659409; organism=Citrus sinensis; type=EST; length=515bp
CCACGCGTCCGGCTCTCCCTACTCTCTACAACTTTCTTCACCACTCTTTC
ACCGCTCAATTTCATCTCTCGAGAATCATGGGGAAGGTCAAGATCGGAAT
CAACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATCTTGCAGA
GGGACGATGTTGAACTCGTTGCTGTTAATGATCCCTTTATCACAACCGAT
TACATGACATACATGTTTAAGTACGACAGTGTTCACGGTCAATGGAAGCA
CCATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGTGAGAAGC
CTGTCACTGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATGGGCTGAG
ACTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACTGACAAGGA
TAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAGAAAGTTATCATCTCAG
CCCCCAGCAAGGATGCTCCTATGTTTGTTGTCGGTGTCAATGAAAACGAG
TACAAACCAGAGCTC
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