EY659407

Overview
NameEY659407
Unique NameEY659407
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659407 vs. ExPASy Swiss-Prot
Match: SUT2_ORYSI (Sucrose transport protein 2 OS=Oryza sativa subsp. indica GN=SUT2M PE=2 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.543e-50
Identity = 109/283 (38.52%), Postives = 157/283 (55.48%), Query Frame = 1
Query:   13 ISGMIVQPIVGFHSDT---CKSRFGRRRPXXXXXXXXXXXXXXXXXYAADIGHSAGDSGTD-SVKTRAIIIFVIGFWILDDANNTLQGP*RALLTDLSGSSNKKTRTANSFFSFFMAVGNVLGYAAGSYTHLDHMLPFTKSKACDADCANLKTCFFLSXXXXXXXXXXXXXXXXEQRLEEIDDKETAPPTKDPFFSEIFGALKGVQKPMWILLAETALNWIAWIPLLLLDTDWMRRDVYCRNSKGTAHELKVYNNRVRAESLGLMLNASSLGITSLAVGVLTK 849
            +SG++VQP+VG  SD      S  GRRRP                 ++AD+G   GDS T  S +  AII++++GFW+LD  NN  QGP RA L DL+ +  ++TR AN++FS FMA+GN+LGYA G+Y+    + PFT + +C   CANLK+ F L                 E +    D+ +     ++ F  E+FG+ +    P+W++L  TAL WI W P +L DTDWM R++Y R S       + Y++ VR  S GLMLN+  LG TS+ +  L +
Sbjct:   71 LSGLLVQPLVGHLSDRIAPAASPLGRRRPFIAAGAASIAAAVLTVGFSADLGRIFGDSITPGSTRLGAIIVYLVGFWLLDVGNNATQGPCRAFLADLTENDPRRTRIANAYFSLFMALGNILGYATGAYSGWYKIFPFTVTPSCSISCANLKSAFLLDIIILVVTTCITVASVQEPQSLGSDEADHPSTEQEAFLWELFGSFRYFTLPVWMVLIVTALTWIGWFPFILFDTDWMGREIY-RGSPDDPSITQSYHDGVRMGSFGLMLNSVLLGFTSIVLEKLCR 352          
BLAST of EY659407 vs. ExPASy Swiss-Prot
Match: SUC3_ARATH (Sucrose transport protein SUC3 OS=Arabidopsis thaliana GN=SUC3 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.895e-32
Identity = 72/159 (45.28%), Postives = 96/159 (60.38%), Query Frame = 1
Query:   13 ISGMIVQPIVGFHSDTCKSRFGRRRPXXXXXXXXXXXXXXXXXYAADIGHSAGDSGTD-----SVKTRAIIIFVIGFWILDDANNTLQGP*RALLTDLSGSSNKKTRTANSFFSFFMAVGNVLGYAAGSYTHLDHMLPFTKSKACDADCANLKTCFFLS 474
            I+G++VQP VG  SD C S++GRRRP                 ++ADIG+  GDS          +TRA ++F+IGFW+LD ANNT+QGP RALL DLSG   +   TAN+ F  +MA+GN+LG++AG+        PF  S+AC A C NLK  F L+
Sbjct:  107 ITGLVVQPFVGIWSDKCTSKYGRRRPFILVGSFMISIAVIIIGFSADIGYLLGDSKEHCSTFKGTRTRAAVVFIIGFWLLDLANNTVQGPARALLADLSGPDQR--NTANAVFCLWMAIGNILGFSAGASGKWQEWFPFLTSRACCAACGNLKAAFLLA 263          
The following BLAST results are available for this feature:
BLAST of EY659407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
SUT2_ORYSI1.543e-5038.52Sucrose transport protein 2 OS=Oryza sativa subsp.... [more]
SUC3_ARATH1.895e-3245.28Sucrose transport protein SUC3 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-G09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659407 ID=EY659407; Name=EY659407; organism=Citrus sinensis; type=EST; length=865bp
CCACGCGTCCGCATCTCCGGCATGATCGTCCAGCCCATCGTCGGCTTCCA
CAGCGACACCTGCAAATCCCGCTTCGGCCGTCGCCGCCCCTTCATTCTCG
CCGGCGCCGTCCTCGTCGCCATCGCTGTGTTTCTCATCGGCTACGCCGCC
GACATAGGCCACTCCGCGGGCGACTCCGGTACCGATTCCGTCAAAACCCG
CGCCATCATCATCTTCGTCATCGGCTTCTGGATTCTCGACGATGCGAATA
ACACATTACAAGGCCCATGAAGAGCCCTCCTCACCGATCTCTCCGGCAGC
AGCAACAAGAAAACAAGAACCGCAAACTCTTTTTTCTCCTTCTTCATGGC
CGTCGGTAACGTGCTTGGCTATGCCGCCGGCTCCTACACTCACTTGGACC
ACATGCTTCCGTTCACAAAGTCAAAAGCTTGCGACGCTGACTGTGCAAAT
TTGAAAACGTGCTTCTTCCTCTCCATAGATCTGCTAATAACCCTAACGAC
AATAGCACTGATTTACGTAACTGAGCAAAGATTAGAAGAGATTGATGATA
AAGAAACGGCGCCGCCCACGAAGGATCCATTTTTCAGCGAGATATTTGGT
GCATTGAAAGGCGTGCAAAAGCCTATGTGGATCCTACTTGCGGAGACAGC
GCTGAACTGGATTGCATGGATCCCGCTCTTGCTGCTCGACACTGATTGGA
TGCGGAGGGACGTGTACTGTAGGAACTCTAAGGGCACTGCACATGAGCTG
AAGGTGTATAACAATCGGGTGAGAGCGGAGTCGTTGGGGCTGATGCTTAA
CGCTAGCAGTCTGGGGATCACGTCGCTGGCTGTGGGAGTCCTGACGAAAC
TGATAGATGGCGTCA
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