EY659385

Overview
NameEY659385
Unique NameEY659385
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length918
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDXS_BACSU (Pyridoxal biosynthesis lyase pdxS OS=Bacillus subtilis GN=pdxS PE=1 SV=3)

HSP 1 Score: 167.933 bits (424), Expect = 7.111e-41
Identity = 89/180 (49.44%), Postives = 126/180 (70.00%), Query Frame = 1
Query:  313 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DEGLTFAK 834
            +K G+A+M +GG I++V + EQAKIAE AGA ++M  E       +  G+ RM DP++V+ V  AVS+PVM++ R+GH VEA++LE++G+DYIDESEVL  ADE   +NK+ +  PFVCGCR+LGEA RRI EGA+M+R +G+   +G  VE V+++R V    R +  M  DE +T AK
Sbjct:    9 VKRGMAEMQKGGVIMDVINAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKARIGHIVEARVLEAMGVDYIDESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEATRRIAEGASMLRTKGE-PGTGNIVEAVRHMRKVNAQVRKVVAMSEDELMTEAK 187          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDXS_BACP2 (Pyridoxal biosynthesis lyase pdxS OS=Bacillus pumilus (strain SAFR-032) GN=pdxS PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 7.111e-41
Identity = 89/187 (47.59%), Postives = 128/187 (68.45%), Query Frame = 1
Query:  292 AKKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DEGLTFAK 834
            + K    +K G+A+M +GG I++V + EQAKIAE AGA ++M  E       +  G+ RM DP +V+ V+ AV++PVM++ R+GH VEA++LE++G+DYIDESEVL  ADE   +NK+ +  PFVCGCR+LGEA RRI EGA+M+R +G+   +G  VE V+++R V    R +  M  DE +T AK
Sbjct:    2 SNKGTERVKRGMAEMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPRIVEEVQNAVTIPVMAKARIGHIVEARVLEALGVDYIDESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEATRRIAEGASMLRTKGE-PGTGNIVEAVRHMRKVNAQIRKVAAMSEDELMTEAK 187          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDXS_BACA2 (Pyridoxal biosynthesis lyase pdxS OS=Bacillus amyloliquefaciens (strain FZB42) GN=pdxS PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 7.111e-41
Identity = 89/180 (49.44%), Postives = 126/180 (70.00%), Query Frame = 1
Query:  313 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DEGLTFAK 834
            +K G+A+M +GG I++V + EQAKIAE AGA ++M  E       +  G+ RM DP++V+ V  AVS+PVM++ R+GH VEA++LE++G+DYIDESEVL  ADE   +NK+ +  PFVCGCR+LGEA RRI EGA+M+R +G+   +G  VE V+++R V    R +  M  DE +T AK
Sbjct:    9 VKRGMAEMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKARIGHIVEARVLEAMGVDYIDESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEATRRIAEGASMLRTKGE-PGTGNIVEAVRHMRKVNAQVRKVVAMSDDELMTEAK 187          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDXS_ACTPJ (Pyridoxal biosynthesis lyase pdxS OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=pdxS PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 7.111e-41
Identity = 93/180 (51.67%), Postives = 128/180 (71.11%), Query Frame = 1
Query:  313 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DEGLTFAK 834
            IK G+AQM +GG I++V S EQA+IAEAAGA ++M  E  PS      G+ RM + ++V+ V  AVS+PVM++ R+GH VEA++LE++G+DYIDESEVL  ADE   + K ++  PFVCGCR+LGEALRRI EGA+M+R +G+   +G  VE V+++R V    R + NM  DE +T AK
Sbjct:   10 IKRGMAQMQKGGVIMDVVSAEQARIAEAAGAVAVMALERVPSDIRAAGGVARMANTAIVREVMEAVSIPVMAKARIGHIVEARVLEAMGVDYIDESEVLTPADEKFHLLKSDYTVPFVCGCRDLGEALRRIGEGASMLRTKGE-PGTGNVVEAVRHLRKVNAQLRKVINMSHDELMTEAK 188          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDXS_MYCS2 (Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium smegmatis GN=pdxS PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 9.287e-41
Identity = 89/180 (49.44%), Postives = 124/180 (68.89%), Query Frame = 1
Query:  313 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DEGLTFAK 834
            +K G+A+ML+GG I++V + EQA+IAEAAGA ++M  E       ++ G+ RM DP +++ +  AV++PVM++ R+GHFVEAQIL+S+G+DY+DESEVL  AD  N I+K  F  PFVCG  NLGEALRRI EGAAMIR +G+   +G       ++R + G+ R L +M  DE    AK
Sbjct:   18 VKRGMAEMLKGGVIMDVVTPEQARIAEAAGAVAVMALERVPADIRAQGGVSRMSDPDMIEGIIDAVTIPVMAKARIGHFVEAQILQSLGVDYVDESEVLTPADYTNHIDKWKFTVPFVCGATNLGEALRRITEGAAMIRSKGE-AGTGDVSNATTHMRKIGGEIRRLTSMSEDELYVAAK 196          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDXS_METM6 (Pyridoxal biosynthesis lyase pdxS OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pdxS PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 9.287e-41
Identity = 88/160 (55.00%), Postives = 119/160 (74.38%), Query Frame = 1
Query:  313 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVV 774
            +K G A+M++ G +++V++VEQA+IAE AGA ++M  E  P+    + G+ RM DP ++  +K AVS+PVM++ R+GHFVEAQ+LESIG+D +DESEVL  ADE N I+K  F  PFVCG RNLGEALRRI EGAAMIR +G+   +G  VE VK++R V
Sbjct:    9 LKRGFAKMVKHGVVMDVTNVEQAQIAEDAGAAAVMALERVPADIRVQGGVARMSDPEMILEIKDAVSIPVMAKARIGHFVEAQLLESIGVDMVDESEVLTPADEVNHIDKRAFTAPFVCGARNLGEALRRIDEGAAMIRTKGE-AGTGNVVEAVKHMRAV 167          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDXS_MACCJ (Pyridoxal biosynthesis lyase pdxS OS=Macrococcus caseolyticus (strain JCSC5402) GN=pdxS PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 9.287e-41
Identity = 93/180 (51.67%), Postives = 124/180 (68.89%), Query Frame = 1
Query:  313 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DEGLTFAK 834
            +K G+A+M +GG I++V + EQAKIAEAAGA ++M  E  PS      G+ RM DP +V+ V  AVS+PVM++ R+GH  EA++LE++G+DYIDESEVL  ADE   + K  F  PFVCGCR+LGEA RRI EGAAM+R +G+   +G  VE V+++R V    R L  M  DE +T AK
Sbjct:   10 VKRGMAEMQKGGVIMDVVNAEQAKIAEAAGAVAVMALERVPSDIRAAGGVARMADPRIVEEVMNAVSIPVMAKGRIGHITEARVLEAMGVDYIDESEVLTPADEEFHLKKDEFTVPFVCGCRDLGEAARRIGEGAAMLRTKGE-PGTGNIVEAVRHLRKVNAQVRKLTVMNDDEIMTEAK 188          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDXS_LISMO (Pyridoxal biosynthesis lyase pdxS OS=Listeria monocytogenes GN=pdxS PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 9.287e-41
Identity = 91/180 (50.56%), Postives = 126/180 (70.00%), Query Frame = 1
Query:  313 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DEGLTFAK 834
            +K G+AQM +GG I++V + EQAKIAE AGA ++M  E  PS      G+ RM DP +V+ V +AVS+PVM++ R+GH  EA++LE++G+DYIDESEVL  AD+   + K +F  PFVCGCR++GEALRRI EGAAM+R +G+   +G  VE V+++R V G  R +  M  DE +  AK
Sbjct:   10 VKRGMAQMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVARMADPRIVEEVMKAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADDEFHLLKSDFTVPFVCGCRDIGEALRRIGEGAAMLRTKGE-PGTGNIVEAVRHMRQVNGQIRQIAGMTDDELMVAAK 188          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: SNZ1_YEAST (Pyridoxine biosynthesis protein SNZ1 OS=Saccharomyces cerevisiae GN=SNZ1 PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.213e-40
Identity = 86/160 (53.75%), Postives = 117/160 (73.12%), Query Frame = 1
Query:  307 FSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEPSRPGIK------RMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVR 768
            F IK+GLAQML+GG I++V + EQAKIAE +GAC++M  E     ++      RM DP ++K +  +VS+PVM++VR+GHFVEAQI+E++ +DYIDESEVL  AD  + I K  F+ PFVCG ++LGEALRRI EGAAMIR +G+   +G   E VK++R
Sbjct:    6 FKIKSGLAQMLKGGVIMDVVTPEQAKIAEKSGACAVMALESIPADMRKSGKVCRMSDPKMIKDIMNSVSIPVMAKVRIGHFVEAQIIEALEVDYIDESEVLTPADWTHHIEKDKFKVPFVCGAKDLGEALRRINEGAAMIRTKGE-AGTGDVSEAVKHIR 164          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDXS_LISIN (Pyridoxal biosynthesis lyase pdxS OS=Listeria innocua GN=pdxS PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.213e-40
Identity = 91/180 (50.56%), Postives = 126/180 (70.00%), Query Frame = 1
Query:  313 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSE--PS----RPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DEGLTFAK 834
            +K G+AQM +GG I++V + EQAKIAE AGA ++M  E  PS      G+ RM DP +V+ V  AVS+PVM++ R+GH  EA++LE++G+DYIDESEVL  AD+   + K +F  PFVCGCR++GEALRRI EGAAM+R +G+   +G  VE V+++R V G  R + +M  DE +  AK
Sbjct:   10 VKRGMAQMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVARMADPRIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADDEFHLLKSDFTVPFVCGCRDIGEALRRIGEGAAMLRTKGE-PGTGNIVEAVRHMRQVNGQIRQIASMTDDELMVAAK 188          
The following BLAST results are available for this feature:
BLAST of EY659385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
PDXS_BACSU7.111e-4149.44Pyridoxal biosynthesis lyase pdxS OS=Bacillus subt... [more]
PDXS_BACP27.111e-4147.59Pyridoxal biosynthesis lyase pdxS OS=Bacillus pumi... [more]
PDXS_BACA27.111e-4149.44Pyridoxal biosynthesis lyase pdxS OS=Bacillus amyl... [more]
PDXS_ACTPJ7.111e-4151.67Pyridoxal biosynthesis lyase pdxS OS=Actinobacillu... [more]
PDXS_MYCS29.287e-4149.44Pyridoxal biosynthesis lyase pdxS OS=Mycobacterium... [more]
PDXS_METM69.287e-4155.00Pyridoxal biosynthesis lyase pdxS OS=Methanococcus... [more]
PDXS_MACCJ9.287e-4151.67Pyridoxal biosynthesis lyase pdxS OS=Macrococcus c... [more]
PDXS_LISMO9.287e-4150.56Pyridoxal biosynthesis lyase pdxS OS=Listeria mono... [more]
SNZ1_YEAST1.213e-4053.75Pyridoxine biosynthesis protein SNZ1 OS=Saccharomy... [more]
PDXS_LISIN1.213e-4050.56Pyridoxal biosynthesis lyase pdxS OS=Listeria inno... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659385 ID=EY659385; Name=EY659385; organism=Citrus sinensis; type=EST; length=918bp
CCACGCGTCCGTGCTCTTCAACGCTTGGAAAGGTGTCGAAATTTCTACAC
TAATCAATCAATTCCCCACCGACTAACCCCACCTTCGAAGCTCTTCAGAA
CCTTCTCGAACTCGCCCCAATCCTCGCTCTCCCTTCAATTTTATAAACCC
CTTTCCACAAAAAGAAACCCAGTACTCGATCAAACGATTCAATTACTACG
CTTCTTGCATCAGTGAGACATTTTTGCAAACGCCTTTGCAATGGCCGAAG
ACGGAGCGGTCACAGTGTACGGTGGCAGCGCCATTACTGACGCCAAGAAA
AACCCGTTTTCGATCAAAGCCGGCCTTGCCCAAATGCTACGTGGCGGGGC
CATTGTTGAAGTCTCCAGTGTGGAACAAGCCAAGATCGCCGAAGCAGCTG
GCGCCTGTTCTATCATGGTATCCGAGCCCAGCCGGCCCGGCATTAAGCGC
ATGCCGGATCCTTCTCTTGTTAAAAGCGTTAAACGCGCCGTTTCAGTCCC
CGTTATGTCACGTGTTCGTGTTGGGCATTTTGTTGAAGCGCAGATTCTTG
AAAGTATTGGGCTCGATTACATTGACGAGAGTGAGGTTTTAGGATTAGCT
GATGAATATAATTTTATTAACAAACATAACTTTAGGTTCCCGTTTGTGTG
TGGTTGTAGGAATCTTGGTGAAGCTTTGAGGAGAATTAGAGAAGGAGCTG
CTATGATAAGAATACAGGGGGATTTGTTAAATTCTGGTAAATATGTCGAG
ACTGTTAAAAATGTGAGGGTCGTTATGGGAGATATNCGAATTTTGAATAA
CATGGGATGAGATGAGGGTCTCACGTTTGCTAAGAGATAGCGGCTCCGTA
TGGATTGGGTGCTCAAACTAACAAATGGGGAGGGNTGCCGTGGGTGCATT
TGCTGCAGGAGTGGTGTG
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