EY659385

Overview
NameEY659385
Unique NameEY659385
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length918
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDXS_COREF (Pyridoxal biosynthesis lyase pdxS OS=Corynebacterium efficiens GN=pdxS PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.652e-37
Identity = 83/179 (46.37%), Postives = 115/179 (64.25%), Query Frame = 1
Query:  316 KAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DEGLTFAK 834
            K G A   +GG I++V + EQA+IAEAAGA ++M  E       ++ G+ RM DP ++  +  AV +PVM++ R+GHFVEAQ+L+S+G+ +IDESEVL  AD  N I+K  F  PFVCG  NLGEALRR+ EGAAMIR +G+   +G     V ++R +  +   L +M  DE    AK
Sbjct:   13 KTGYADRFKGGVIMDVVNPEQARIAEAAGAVAVMALERVPADIRAQGGVSRMSDPDMIDGILEAVDIPVMAKARIGHFVEAQVLQSLGVHFIDESEVLTPADYANHIDKFAFEVPFVCGATNLGEALRRVNEGAAMIRSKGE-AGTGDVSNAVTHMRTIRAEINRLTSMAEDELYVAAK 190          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDXS_AERPE (Pyridoxal biosynthesis lyase pdxS OS=Aeropyrum pernix GN=pdxS PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.770e-37
Identity = 86/208 (41.35%), Postives = 131/208 (62.98%), Query Frame = 1
Query:  241 MAEDGAVTVYGGSAITDAKKNPFS----IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DEGLTFAK 834
            + E+G    YG   + +A + P +    +K G     +GG +++V++VEQA IAE AGA ++MV +          G+ RM D  +++ V  ++++PVM++VR+GH+ EA ILESIG+D IDESEVL   DE + INK  F+ PFV G R+L EALRRI EGA+MIR +G+   +G   E V++++++MGD   L  +  +E L  A+
Sbjct:   20 LREEGVWLAYGPEKLPEALEKPVNGTVAVKLGFPIYQKGGVVMDVTNVEQAGIAEDAGAVAVMVLDKLPYDVRKAGGVARMADVKVIEQVMSSITIPVMAKVRIGHYYEAMILESIGVDMIDESEVLTPVDEKHHINKWLFKVPFVNGARSLAEALRRIAEGASMIRTKGE-AGTGNVAEAVRHMKLIMGDIWRLRGLSAEERLRVAR 226          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDXS_METJA (Pyridoxal biosynthesis lyase pdxS OS=Methanocaldococcus jannaschii GN=pdxS PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.063e-36
Identity = 86/186 (46.24%), Postives = 122/186 (65.59%), Query Frame = 1
Query:  295 KKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DEGLTFAK 834
            KK    +K G A+M++ G +++V++VEQA+IAE AGA ++M  E       +  G+ RM DP+L++ +  AVS+PVM++ R+GH  EA +LE+IG+D IDESEVL  AD +  I K  F  PFVCG RNLGEA+RRI EGAAMIR +G+   +G  VE V+++R++      L  M  +E    AK
Sbjct:    2 KKGTDLLKKGFAKMVKHGVVMDVTNVEQAQIAEEAGAVAVMALERVPADIRAAGGVARMSDPALIEEIMDAVSIPVMAKCRIGHTTEALVLEAIGVDMIDESEVLTQADPFFHIYKKKFNVPFVCGARNLGEAVRRIWEGAAMIRTKGE-AGTGNIVEAVRHMRLMNEAIAQLQRMTDEEVYGVAK 186          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDXS_THEON (Pyridoxal biosynthesis lyase pdxS OS=Thermococcus onnurineus (strain NA1) GN=pdxS PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.367e-36
Identity = 79/170 (46.47%), Postives = 116/170 (68.24%), Query Frame = 1
Query:  313 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNM 804
            +K G A+M++GG I++V++ EQA+IAE AGA S+M             G+ RM     ++ +  AV++PVM++VR+GH  EA++LE++G+D IDESEVL  AD +  I+K  F  PFVCG RNLGEA+RRI EG+AMIR +G+   +G  VE V++VR+V  + R++  M
Sbjct:   15 LKRGFARMVKGGVIMDVTNAEQARIAEEAGAVSVMALHKVPADIRKAGGVARMAPIEKIQEIMDAVTIPVMAKVRIGHVAEARVLEALGVDMIDESEVLTPADPFFHIDKREFNVPFVCGARNLGEAVRRIWEGSAMIRTKGE-AGTGNIVEAVRHVRLVADNIRLIQRM 183          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDXS_SULTO (Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus tokodaii GN=pdxS PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.092e-36
Identity = 78/171 (45.61%), Postives = 121/171 (70.76%), Query Frame = 1
Query:  340 RGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DEGLTFAK 834
            +GG +++V++V QA+IAE AGA ++MV +          G+ RM DP +++ V  ++++PVM++VR+GH+ EA+ILE++G+D IDESEVL  ADE + INK  F+ PFV G RNLGEALRRI EGA+MIR +G+   +G   E VK+++++ G+ R L +M  ++ +  A+
Sbjct:   58 KGGVVMDVTNVTQAEIAEDAGATAVMVLDKLPYDVRKSGGVARMADPKIIEEVMNSITIPVMAKVRIGHYYEAKILEALGVDMIDESEVLTPADEEHHINKWEFKVPFVNGARNLGEALRRITEGASMIRTKGE-AGTGNVSEAVKHMKIINGEIRSLISMSEEDRMKKAR 227          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDXS_METS5 (Pyridoxal biosynthesis lyase pdxS OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=pdxS PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.038e-36
Identity = 80/181 (44.20%), Postives = 120/181 (66.30%), Query Frame = 1
Query:  280 AITDAKKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNM 804
            ++T   +    +K       +GG +++V+SVEQA IAE AGA S+MV +          G+ RM DP +++ V  ++++PVM++VR+GH+ EA++LE++G+D IDESEVL  ADE + INK  F+ PFV G RNLGE LRRI EGA+MIR +G+   +G   E VK++++V  + R L +M
Sbjct:   39 SLTGQVQGTTRVKHAFPIFQKGGVVMDVTSVEQAGIAEEAGAVSVMVLDKLPYDVRKAGGVARMADPKIIEEVMNSITIPVMAKVRIGHYYEAKVLEALGVDMIDESEVLTPADEEHHINKWEFKIPFVNGARNLGEGLRRISEGASMIRTKGE-PGTGNVSEAVKHIKIVNQELRALLSM 218          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDXS_THEGJ (Pyridoxal biosynthesis lyase pdxS OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pdxS PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 8.996e-36
Identity = 79/176 (44.89%), Postives = 118/176 (67.05%), Query Frame = 1
Query:  295 KKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNM 804
            KK    +K G A+M++GG I++V++ EQA+IAE AGA ++M             G+ RM     ++ +  AV++PVM++VR+GH  EA+ILE++G+D IDESEVL  +D Y  I+K  F+ PFVCG RNLGEA+RRI EGAAM+R +G+   +G  +E V++VR++  +  +L  M
Sbjct:    9 KKGTERLKRGFAKMVKGGVIMDVTNAEQARIAEEAGAVAVMALHRVPADIRKAGGVARMAPIEKIQEIMDAVTIPVMAKVRIGHVAEARILEALGVDMIDESEVLTPSDPYFHIDKREFKIPFVCGNRNLGEAVRRIWEGAAMMRTKGE-AGTGNIIEAVRHVRLLKDNIALLQRM 183          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDXS_PYRFU (Pyridoxal biosynthesis lyase pdxS OS=Pyrococcus furiosus GN=pdxS PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.175e-35
Identity = 81/180 (45.00%), Postives = 119/180 (66.11%), Query Frame = 1
Query:  295 KKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DE 816
            +K    +K G A+M++GG I++V++ EQA+IAE AGA ++M             G+ RM     ++ +  AV++PVM++VR+GH  EA+ILE++G+D IDESEVL  AD +  I K  F  PFVCG RNLGEA+RRI EGAAMIR +G+   +G  +E V++VR+V  + R++  M  +E
Sbjct:    9 EKGTERLKRGFAKMVKGGVIMDVTNAEQARIAEEAGAVAVMALHKVPADIRKAGGVARMAPVEKIQEIMDAVTIPVMAKVRIGHEAEARILEALGVDMIDESEVLTPADPFFHIYKKKFTVPFVCGARNLGEAVRRIWEGAAMIRTKGE-AGTGNIIEAVRHVRLVNENIRLIQRMTDEE 187          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDXS_PYRKO (Pyridoxal biosynthesis lyase pdxS OS=Pyrococcus kodakaraensis GN=pdxS PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.534e-35
Identity = 82/181 (45.30%), Postives = 119/181 (65.75%), Query Frame = 1
Query:  313 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DEGLTFAKR 837
            +K G A+M++GG I++V++ EQA+IAE AGA S+M             G+ RM     ++ +  AV++PVM++VR+GH  EA+ILE++G+D IDESEVL  +D +  I+K  F  PFVCG RNLGEA+RRI EGAAMIR +G+   +G  VE V++VR+V    R +  M  D+    A++
Sbjct:   15 LKRGFAKMVKGGVIMDVTNAEQARIAEEAGAVSVMALHRVPADIRKAGGVARMAPIEKIQEIMDAVTIPVMAKVRIGHVAEAKILEALGVDMIDESEVLTPSDPFFHIDKREFTVPFVCGARNLGEAVRRIWEGAAMIRTKGE-AGTGNIVEAVRHVRLVAEGIRQIQAMTDDQVYAVAEK 194          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDXS_PYRAB (Pyridoxal biosynthesis lyase pdxS OS=Pyrococcus abyssi GN=pdxS PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.464e-35
Identity = 81/180 (45.00%), Postives = 118/180 (65.56%), Query Frame = 1
Query:  295 KKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DE 816
            +K    +K G A+M++GG I++V++ EQA+IAE AGA ++M             G+ RM     ++ +  AV++PVM++ R+GH  EA+ILE++G+D IDESEVL  AD +  I K  F  PFVCG RNLGEA+RRI EGAAMIR +G+   +G  VE V++VR+V  + R++  M  +E
Sbjct:    9 EKGTERLKRGFAKMVKGGVIMDVTNAEQARIAEEAGAVAVMALHKVPADIRKAGGVARMAPVEKIQEIMDAVTIPVMAKCRIGHEAEARILEALGVDMIDESEVLTPADPFFHIYKKKFTAPFVCGARNLGEAVRRIWEGAAMIRTKGE-AGTGNIVEAVRHVRLVNENIRLIQRMTDEE 187          
The following BLAST results are available for this feature:
BLAST of EY659385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
PDXS_COREF3.652e-3746.37Pyridoxal biosynthesis lyase pdxS OS=Corynebacteri... [more]
PDXS_AERPE4.770e-3741.35Pyridoxal biosynthesis lyase pdxS OS=Aeropyrum per... [more]
PDXS_METJA1.063e-3646.24Pyridoxal biosynthesis lyase pdxS OS=Methanocaldoc... [more]
PDXS_THEON2.367e-3646.47Pyridoxal biosynthesis lyase pdxS OS=Thermococcus ... [more]
PDXS_SULTO3.092e-3645.61Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus to... [more]
PDXS_METS54.038e-3644.20Pyridoxal biosynthesis lyase pdxS OS=Metallosphaer... [more]
PDXS_THEGJ8.996e-3644.89Pyridoxal biosynthesis lyase pdxS OS=Thermococcus ... [more]
PDXS_PYRFU1.175e-3545.00Pyridoxal biosynthesis lyase pdxS OS=Pyrococcus fu... [more]
PDXS_PYRKO1.534e-3545.30Pyridoxal biosynthesis lyase pdxS OS=Pyrococcus ko... [more]
PDXS_PYRAB4.464e-3545.00Pyridoxal biosynthesis lyase pdxS OS=Pyrococcus ab... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659385 ID=EY659385; Name=EY659385; organism=Citrus sinensis; type=EST; length=918bp
CCACGCGTCCGTGCTCTTCAACGCTTGGAAAGGTGTCGAAATTTCTACAC
TAATCAATCAATTCCCCACCGACTAACCCCACCTTCGAAGCTCTTCAGAA
CCTTCTCGAACTCGCCCCAATCCTCGCTCTCCCTTCAATTTTATAAACCC
CTTTCCACAAAAAGAAACCCAGTACTCGATCAAACGATTCAATTACTACG
CTTCTTGCATCAGTGAGACATTTTTGCAAACGCCTTTGCAATGGCCGAAG
ACGGAGCGGTCACAGTGTACGGTGGCAGCGCCATTACTGACGCCAAGAAA
AACCCGTTTTCGATCAAAGCCGGCCTTGCCCAAATGCTACGTGGCGGGGC
CATTGTTGAAGTCTCCAGTGTGGAACAAGCCAAGATCGCCGAAGCAGCTG
GCGCCTGTTCTATCATGGTATCCGAGCCCAGCCGGCCCGGCATTAAGCGC
ATGCCGGATCCTTCTCTTGTTAAAAGCGTTAAACGCGCCGTTTCAGTCCC
CGTTATGTCACGTGTTCGTGTTGGGCATTTTGTTGAAGCGCAGATTCTTG
AAAGTATTGGGCTCGATTACATTGACGAGAGTGAGGTTTTAGGATTAGCT
GATGAATATAATTTTATTAACAAACATAACTTTAGGTTCCCGTTTGTGTG
TGGTTGTAGGAATCTTGGTGAAGCTTTGAGGAGAATTAGAGAAGGAGCTG
CTATGATAAGAATACAGGGGGATTTGTTAAATTCTGGTAAATATGTCGAG
ACTGTTAAAAATGTGAGGGTCGTTATGGGAGATATNCGAATTTTGAATAA
CATGGGATGAGATGAGGGTCTCACGTTTGCTAAGAGATAGCGGCTCCGTA
TGGATTGGGTGCTCAAACTAACAAATGGGGAGGGNTGCCGTGGGTGCATT
TGCTGCAGGAGTGGTGTG
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