EY659385

Overview
NameEY659385
Unique NameEY659385
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length918
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDXS_PYRHO (Pyridoxal biosynthesis lyase pdxS OS=Pyrococcus horikoshii GN=pdxS PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.831e-35
Identity = 80/180 (44.44%), Postives = 118/180 (65.56%), Query Frame = 1
Query:  295 KKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DE 816
            +K    +K G A+M++GG I++V++ EQA+IAE AGA ++M             G+ RM     ++ +  AV++PVM++ R+GH  EA+ILE++G+D IDESEVL  AD +  I K  F  PFVCG RNLGEA+RRI EGAAMIR +G+   +G  +E V++VR+V  + R++  M  +E
Sbjct:    9 EKGTERLKRGFAKMVKGGVIMDVTNAEQARIAEEAGAVAVMALHKVPADIRKAGGVARMAPVEKIQEIMDAVTIPVMAKCRIGHEAEARILEALGVDMIDESEVLTPADPFFHIYKKKFTAPFVCGARNLGEAVRRIWEGAAMIRTKGE-AGTGNIIEAVRHVRLVNENIRLIQRMTDEE 187          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDXS_HALLT (Pyridoxal biosynthesis lyase pdxS OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=pdxS PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 7.615e-35
Identity = 84/190 (44.21%), Postives = 118/190 (62.11%), Query Frame = 1
Query:  283 ITDAKKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DEGLTFAK 834
            + + K+    +K G A+M +GG I++V + EQA+IAE  GA ++M  E        R G+ RMPDP  V  +   VS+PVM + R+GH  EA+ILES+G+D IDESEVL  AD+    +K +F  PFVCG R+L EALRRIREGAAMIR +G+   +G   + VK+ R +    R L  +  +E   +A+
Sbjct:    7 LEELKRGTDLVKRGFARMQKGGVIMDVVTREQARIAEDTGAVAVMALEAVPADIRKRGGVARMPDPENVTEIIDEVSIPVMGKSRIGHRKEAEILESLGVDMIDESEVLTPADDEYHTDKRDFASPFVCGARDLPEALRRIREGAAMIRTKGE-AGTGDVNQAVKHQRTIKTQIRTLTGLNHEEREKWAR 195          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDXS_THEAC (Pyridoxal biosynthesis lyase pdxS OS=Thermoplasma acidophilum GN=pdxS PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.697e-34
Identity = 82/176 (46.59%), Postives = 114/176 (64.77%), Query Frame = 1
Query:  313 IKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DEGL 822
            IK G + M +GG I++V++ +QAKIAEAAGA ++M  E       +  G+ RM DP  +K +  AVS+PVM++VR+GH  EA +LE IG+D +DESEVL  AD +  + K N   P V G RNL EA+RRI EGAAMIR +G+   +G  +E V+++R V  +  +L  M  DE L
Sbjct:   15 IKRGFSAMTKGGVIMDVTTADQAKIAEAAGAVAVMALERVPADIRAAGGVARMADPMKIKEIMDAVSIPVMAKVRIGHISEAYVLEKIGVDMLDESEVLTPADPFFHLYKKNLTVPVVSGARNLPEAVRRIFEGAAMIRTKGE-AGTGNIIEAVRHIRKVNEEISVLKRMS-DEQL 188          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDXS_SULSO (Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus solfataricus GN=pdxS PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.697e-34
Identity = 74/171 (43.27%), Postives = 119/171 (69.59%), Query Frame = 1
Query:  340 RGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DEGLTFAK 834
            +GG ++++++V+QA+IAE AGA ++MV +          G+ RM DP +++ V  ++++PVM++VR+GH+ EA++LE++G+D IDESEVL  ADE + INK  F  PFV G RNLGEALRR  EGA+MIR +G+   +G   E VK+++++  + R L +M  ++ +  A+
Sbjct:   60 KGGVVMDITNVQQAQIAEEAGAVAVMVLDKLPYDVRKSGGVARMADPKIIEEVMSSITIPVMAKVRIGHYYEAKLLEALGVDMIDESEVLTPADEEHHINKWEFSVPFVNGARNLGEALRRTSEGASMIRTKGE-AGTGNVSEAVKHMKIINSEIRSLISMSEEDRVKKAR 229          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDXS_SULIY (Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=pdxS PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.894e-34
Identity = 74/171 (43.27%), Postives = 118/171 (69.01%), Query Frame = 1
Query:  340 RGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DEGLTFAK 834
            +GG ++++++V+QA+IAE AGA ++MV +          G+ RM DP ++  V  ++++PVM++VR+GH+ EA++LE++G+D IDESEVL  ADE + INK  F  PFV G RNLGEALRR  EGA+MIR +G+   +G   E VK+++++  + R L +M  ++ +  A+
Sbjct:   60 KGGVVMDITNVQQAQIAEEAGAVAVMVLDKLPYDVRKSGGVARMADPKIIGEVMNSITIPVMAKVRIGHYYEAKLLEALGVDMIDESEVLTPADEEHHINKWEFSVPFVNGARNLGEALRRTAEGASMIRTKGE-AGTGNVSEAVKHMKIINSEIRSLISMSEEDRVKKAR 229          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDXS_SULIM (Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=pdxS PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.894e-34
Identity = 74/171 (43.27%), Postives = 118/171 (69.01%), Query Frame = 1
Query:  340 RGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DEGLTFAK 834
            +GG ++++++V+QA+IAE AGA ++MV +          G+ RM DP ++  V  ++++PVM++VR+GH+ EA++LE++G+D IDESEVL  ADE + INK  F  PFV G RNLGEALRR  EGA+MIR +G+   +G   E VK+++++  + R L +M  ++ +  A+
Sbjct:   60 KGGVVMDITNVQQAQIAEEAGAVAVMVLDKLPYDVRKSGGVARMADPKIIGEVMNSITIPVMAKVRIGHYYEAKLLEALGVDMIDESEVLTPADEEHHINKWEFSVPFVNGARNLGEALRRTAEGASMIRTKGE-AGTGNVSEAVKHMKIINSEIRSLISMSEEDRVKKAR 229          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDXS_SULIL (Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=pdxS PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.894e-34
Identity = 74/171 (43.27%), Postives = 118/171 (69.01%), Query Frame = 1
Query:  340 RGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DEGLTFAK 834
            +GG ++++++V+QA+IAE AGA ++MV +          G+ RM DP ++  V  ++++PVM++VR+GH+ EA++LE++G+D IDESEVL  ADE + INK  F  PFV G RNLGEALRR  EGA+MIR +G+   +G   E VK+++++  + R L +M  ++ +  A+
Sbjct:   60 KGGVVMDITNVQQAQIAEEAGAVAVMVLDKLPYDVRKSGGVARMADPKIIGEVMNSITIPVMAKVRIGHYYEAKLLEALGVDMIDESEVLTPADEEHHINKWEFSVPFVNGARNLGEALRRTAEGASMIRTKGE-AGTGNVSEAVKHMKIINSEIRSLISMSEEDRVKKAR 229          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDXS_SULIK (Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=pdxS PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.894e-34
Identity = 74/171 (43.27%), Postives = 118/171 (69.01%), Query Frame = 1
Query:  340 RGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DEGLTFAK 834
            +GG ++++++V+QA+IAE AGA ++MV +          G+ RM DP ++  V  ++++PVM++VR+GH+ EA++LE++G+D IDESEVL  ADE + INK  F  PFV G RNLGEALRR  EGA+MIR +G+   +G   E VK+++++  + R L +M  ++ +  A+
Sbjct:   60 KGGVVMDITNVQQAQIAEEAGAVAVMVLDKLPYDVRKSGGVARMADPKIIGEVMNSITIPVMAKVRIGHYYEAKLLEALGVDMIDESEVLTPADEEHHINKWEFSVPFVNGARNLGEALRRTAEGASMIRTKGE-AGTGNVSEAVKHMKIINSEIRSLISMSEEDRVKKAR 229          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDXS_SULIA (Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus islandicus (strain M.16.27) GN=pdxS PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.894e-34
Identity = 74/171 (43.27%), Postives = 118/171 (69.01%), Query Frame = 1
Query:  340 RGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRILNNMG*DEGLTFAK 834
            +GG ++++++V+QA+IAE AGA ++MV +          G+ RM DP ++  V  ++++PVM++VR+GH+ EA++LE++G+D IDESEVL  ADE + INK  F  PFV G RNLGEALRR  EGA+MIR +G+   +G   E VK+++++  + R L +M  ++ +  A+
Sbjct:   60 KGGVVMDITNVQQAQIAEEAGAVAVMVLDKLPYDVRKSGGVARMADPKIIGEVMNSITIPVMAKVRIGHYYEAKLLEALGVDMIDESEVLTPADEEHHINKWEFSVPFVNGARNLGEALRRTAEGASMIRTKGE-AGTGNVSEAVKHMKIINSEIRSLISMSEEDRVKKAR 229          
BLAST of EY659385 vs. ExPASy Swiss-Prot
Match: PDXS_HALWD (Pyridoxal biosynthesis lyase pdxS OS=Haloquadratum walsbyi (strain DSM 16790) GN=pdxS PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.894e-34
Identity = 81/177 (45.76%), Postives = 112/177 (63.28%), Query Frame = 1
Query:  283 ITDAKKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGKYVETVKNVRVVMGDXRIL 795
            +++ ++    +K G A+M +GG I++V   EQA+IAE AGA ++M  E        R G+ RMPDP +V  +   VS+P M + R+GH  EA+ILES+G+D IDESEVL  AD+   I+K +F  PFVCG RNL EALRRI EGAAMIR +G+   +G   + V + R +    R L
Sbjct:    7 LSELRRGTELVKRGFARMQKGGVIMDVVDAEQARIAEDAGAVAVMALESVPADIRKRGGVARMPDPDIVPEIIDEVSIPAMGKSRIGHTKEAEILESLGVDMIDESEVLTPADDRYHIDKRHFTAPFVCGARNLQEALRRIDEGAAMIRTKGE-AGTGDVNQAVHHQRNIKSSIREL 182          
The following BLAST results are available for this feature:
BLAST of EY659385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
PDXS_PYRHO5.831e-3544.44Pyridoxal biosynthesis lyase pdxS OS=Pyrococcus ho... [more]
PDXS_HALLT7.615e-3544.21Pyridoxal biosynthesis lyase pdxS OS=Halorubrum la... [more]
PDXS_THEAC1.697e-3446.59Pyridoxal biosynthesis lyase pdxS OS=Thermoplasma ... [more]
PDXS_SULSO1.697e-3443.27Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus so... [more]
PDXS_SULIY2.894e-3443.27Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus is... [more]
PDXS_SULIM2.894e-3443.27Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus is... [more]
PDXS_SULIL2.894e-3443.27Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus is... [more]
PDXS_SULIK2.894e-3443.27Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus is... [more]
PDXS_SULIA2.894e-3443.27Pyridoxal biosynthesis lyase pdxS OS=Sulfolobus is... [more]
PDXS_HALWD2.894e-3445.76Pyridoxal biosynthesis lyase pdxS OS=Haloquadratum... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659385 ID=EY659385; Name=EY659385; organism=Citrus sinensis; type=EST; length=918bp
CCACGCGTCCGTGCTCTTCAACGCTTGGAAAGGTGTCGAAATTTCTACAC
TAATCAATCAATTCCCCACCGACTAACCCCACCTTCGAAGCTCTTCAGAA
CCTTCTCGAACTCGCCCCAATCCTCGCTCTCCCTTCAATTTTATAAACCC
CTTTCCACAAAAAGAAACCCAGTACTCGATCAAACGATTCAATTACTACG
CTTCTTGCATCAGTGAGACATTTTTGCAAACGCCTTTGCAATGGCCGAAG
ACGGAGCGGTCACAGTGTACGGTGGCAGCGCCATTACTGACGCCAAGAAA
AACCCGTTTTCGATCAAAGCCGGCCTTGCCCAAATGCTACGTGGCGGGGC
CATTGTTGAAGTCTCCAGTGTGGAACAAGCCAAGATCGCCGAAGCAGCTG
GCGCCTGTTCTATCATGGTATCCGAGCCCAGCCGGCCCGGCATTAAGCGC
ATGCCGGATCCTTCTCTTGTTAAAAGCGTTAAACGCGCCGTTTCAGTCCC
CGTTATGTCACGTGTTCGTGTTGGGCATTTTGTTGAAGCGCAGATTCTTG
AAAGTATTGGGCTCGATTACATTGACGAGAGTGAGGTTTTAGGATTAGCT
GATGAATATAATTTTATTAACAAACATAACTTTAGGTTCCCGTTTGTGTG
TGGTTGTAGGAATCTTGGTGAAGCTTTGAGGAGAATTAGAGAAGGAGCTG
CTATGATAAGAATACAGGGGGATTTGTTAAATTCTGGTAAATATGTCGAG
ACTGTTAAAAATGTGAGGGTCGTTATGGGAGATATNCGAATTTTGAATAA
CATGGGATGAGATGAGGGTCTCACGTTTGCTAAGAGATAGCGGCTCCGTA
TGGATTGGGTGCTCAAACTAACAAATGGGGAGGGNTGCCGTGGGTGCATT
TGCTGCAGGAGTGGTGTG
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