EY659372

Overview
NameEY659372
Unique NameEY659372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length557
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4784 contig Csv1_Contig4784:330..886. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY659372 vs. ExPASy Swiss-Prot
Match: UBC1_MAGGR (Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnaporthe grisea GN=UBC1 PE=3 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 2.454e-48
Identity = 85/108 (78.70%), Postives = 99/108 (91.67%), Query Frame = 1 
Query:    1 PRVRPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 324
            P   P+AGGVF ++IHFP DYPFKPPKV F T+++HPNINSNGSICLDIL++QWSPALTISKVLLSICS+LTDPNPDDPLVPEIAH+YKT RA+YE+TAR WT+KYA+
Sbjct:   40 PSDSPYAGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVYKTARAQYESTAREWTRKYAI 147
[Close]
BLAST of EY659372 vs. ExPASy Swiss-Prot
Match: UBC1_COLGL (Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletotrichum gloeosporioides GN=UBC1 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.454e-48
Identity = 84/108 (77.78%), Postives = 99/108 (91.67%), Query Frame = 1 
Query:    1 PRVRPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 324
            P   P++GGVF ++IHFP DYPFKPPKV F T+++HPNINSNGSICLDIL++QWSPALTISKVLLSICS+LTDPNPD+PLVPEIAH+YKTDRA+YE TAR WT+KYA+
Sbjct:   40 PGDSPYSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDEPLVPEIAHVYKTDRARYEATAREWTRKYAI 147
[Close]
BLAST of EY659372 vs. ExPASy Swiss-Prot
Match: UB2D4_HUMAN (Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens GN=UBE2D4 PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.591e-47
Identity = 85/108 (78.70%), Postives = 92/108 (85.19%), Query Frame = 1 
Query:    1 PRVRPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 324
            P   P+ GGVF ++IHFP DYPFKPPKVAF TK++HPNINSNGSICLDIL+ QWSPALT+SKVLLSICSLL DPNPDDPLVPEIAH YK DR KY   AR WTQKYAM
Sbjct:   40 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINSNGSICLDILRSQWSPALTVSKVLLSICSLLCDPNPDDPLVPEIAHTYKADREKYNRLAREWTQKYAM 147
[Close]
BLAST of EY659372 vs. ExPASy Swiss-Prot
Match: UBC5_YEAST (Ubiquitin-conjugating enzyme E2-16 kDa OS=Saccharomyces cerevisiae GN=UBC5 PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 3.544e-47
Identity = 84/108 (77.78%), Postives = 97/108 (89.81%), Query Frame = 1 
Query:    1 PRVRPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 324
            P   P+AGGVF +SIHFP DYPFKPPKV F TK++HPNINS+G+ICLDILK+QWSPALT+SKVLLSICSLLTD NPDDPLVPEIA +YKTD+AKYE TA+ WT+KYA+
Sbjct:   41 PSDSPYAGGVFFLSIHFPTDYPFKPPKVNFTTKIYHPNINSSGNICLDILKDQWSPALTLSKVLLSICSLLTDANPDDPLVPEIAQIYKTDKAKYEATAKEWTKKYAV 148
[Close]
BLAST of EY659372 vs. ExPASy Swiss-Prot
Match: UB2D2_XENLA (Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laevis GN=ube2d2 PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 3.544e-47
Identity = 85/108 (78.70%), Postives = 93/108 (86.11%), Query Frame = 1 
Query:    1 PRVRPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 324
            P   P+ GGVF ++IHFP DYPFKPPKVAF T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTDR KY   AR WTQKYAM
Sbjct:   40 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 147
[Close]
BLAST of EY659372 vs. ExPASy Swiss-Prot
Match: UB2D2_RAT (Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus GN=Ube2d2 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 3.544e-47
Identity = 85/108 (78.70%), Postives = 93/108 (86.11%), Query Frame = 1 
Query:    1 PRVRPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 324
            P   P+ GGVF ++IHFP DYPFKPPKVAF T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTDR KY   AR WTQKYAM
Sbjct:   40 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 147
[Close]
BLAST of EY659372 vs. ExPASy Swiss-Prot
Match: UB2D2_MOUSE (Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus GN=Ube2d2 PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 3.544e-47
Identity = 85/108 (78.70%), Postives = 93/108 (86.11%), Query Frame = 1 
Query:    1 PRVRPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 324
            P   P+ GGVF ++IHFP DYPFKPPKVAF T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTDR KY   AR WTQKYAM
Sbjct:   40 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 147
[Close]
BLAST of EY659372 vs. ExPASy Swiss-Prot
Match: UB2D2_HUMAN (Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens GN=UBE2D2 PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 3.544e-47
Identity = 85/108 (78.70%), Postives = 93/108 (86.11%), Query Frame = 1 
Query:    1 PRVRPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 324
            P   P+ GGVF ++IHFP DYPFKPPKVAF T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTDR KY   AR WTQKYAM
Sbjct:   40 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 147
[Close]
BLAST of EY659372 vs. ExPASy Swiss-Prot
Match: UB2D2_BOVIN (Ubiquitin-conjugating enzyme E2 D2 OS=Bos taurus GN=UBE2D2 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 3.544e-47
Identity = 85/108 (78.70%), Postives = 93/108 (86.11%), Query Frame = 1 
Query:    1 PRVRPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 324
            P   P+ GGVF ++IHFP DYPFKPPKVAF T+++HPNINSNGSICLDIL+ QWSPALTISKVLLSICSLL DPNPDDPLVPEIA +YKTDR KY   AR WTQKYAM
Sbjct:   40 PNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 147
[Close]
BLAST of EY659372 vs. ExPASy Swiss-Prot
Match: UBC4_CANAL (Ubiquitin-conjugating enzyme E2 4 OS=Candida albicans GN=UBC4 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 4.629e-47
Identity = 84/108 (77.78%), Postives = 95/108 (87.96%), Query Frame = 1 
Query:    1 PRVRPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 324
            P   P+AGGVF +SIHFP DYP KPPK+A  TK++HPNINSNG+ICLDILK+QWSPALTISKVLLSICSLLTD NPDDPLVPEIAH+YK DR KYE TA+ WT+KYA+
Sbjct:   40 PPDSPYAGGVFFLSIHFPTDYPLKPPKIALTTKIYHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAHIYKQDRKKYEATAKEWTKKYAV 147
The following BLAST results are available for this feature:
BLAST of EY659372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 241
Match NameE-valueIdentityDescription
UBC1_MAGGR2.454e-4878.70Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnapor... [more]
UBC1_COLGL2.454e-4877.78Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletot... [more]
UB2D4_HUMAN1.591e-4778.70Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens... [more]
UBC5_YEAST3.544e-4777.78Ubiquitin-conjugating enzyme E2-16 kDa OS=Saccharo... [more]
UB2D2_XENLA3.544e-4778.70Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laev... [more]
UB2D2_RAT3.544e-4778.70Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norve... [more]
UB2D2_MOUSE3.544e-4778.70Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus... [more]
UB2D2_HUMAN3.544e-4778.70Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens... [more]
UB2D2_BOVIN3.544e-4778.70Ubiquitin-conjugating enzyme E2 D2 OS=Bos taurus G... [more]
UBC4_CANAL4.629e-4777.78Ubiquitin-conjugating enzyme E2 4 OS=Candida albic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-D10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659372 ID=EY659372; Name=EY659372; organism=Citrus sinensis; type=EST; length=557bp
CCACGCGTCCGCCCATTTGCTGGCGGTGTATTTCTTGTATCCATTCATTT
CCCACCTGATTATCCATTCAAGCCACCGAAGGTGGCCTTCCGTACTAAGG
TTTTCCACCCTAACATCAACAGCAATGGTAGCATCTGTCTTGACATTCTC
AAGGAGCAGTGGAGCCCTGCTTTGACAATATCCAAGGTACTTCTGTCAAT
TTGCTCACTACTTACTGATCCGAACCCAGATGACCCACTTGTGCCTGAGA
TTGCTCACATGTACAAGACTGACAGAGCCAAATATGAGACTACTGCTCGA
TCCTGGACTCAGAAGTATGCCATGGGTTAAGAGGGGCTAGGCTGTATGCC
CCTGAGAACATTAATGGCTTGTGGTCCTATTAGTAAATAATAGAAATAAG
TTTGTTTCAGATATTAAAAGACGATATTTGGTTTTGTTTACTAAGTTGTT
AAAAGGTTTTATGTGGGGTTACTTTCAAATTTAGCATTGTTCTTCAATAC
TTAAATTATAATTTACTGCAGAATTGAGCTGCCTTTGCCTTTAAAAAAAA
AAAAAAA
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