EY659372

Overview
NameEY659372
Unique NameEY659372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length557
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659372 vs. ExPASy Swiss-Prot
Match: UBC9B_DANRE (SUMO-conjugating enzyme UBC9-B OS=Danio rerio GN=ube2ib PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.026e-18
Identity = 43/105 (40.95%), Postives = 64/105 (60.95%), Query Frame = 1
Query:   13 PFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 321
            P+ GG+F + + F  DYP  PPK  F   +FHPN+  +G++CL IL+E   W PA+TI ++LL I  LL +PN  DP   E   +Y  +R +YE   R+  +K++
Sbjct:   52 PWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFS 156          
BLAST of EY659372 vs. ExPASy Swiss-Prot
Match: UBC9A_DANRE (SUMO-conjugating enzyme UBC9-A OS=Danio rerio GN=ube2ia PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.026e-18
Identity = 43/105 (40.95%), Postives = 64/105 (60.95%), Query Frame = 1
Query:   13 PFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 321
            P+ GG+F + + F  DYP  PPK  F   +FHPN+  +G++CL IL+E   W PA+TI ++LL I  LL +PN  DP   E   +Y  +R +YE   R+  +K++
Sbjct:   52 PWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFS 156          
BLAST of EY659372 vs. ExPASy Swiss-Prot
Match: UB2SB_XENLA (Ubiquitin-conjugating enzyme E2 S-B OS=Xenopus laevis GN=ube2s-B PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.026e-18
Identity = 44/109 (40.37%), Postives = 64/109 (58.72%), Query Frame = 1
Query:    1 PRVRPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 327
            P   P+AGG+F + +    D+P  PPK  F TK+FHPN+++NG IC+++LK+ W   L I  VLL+I  LL  PNP+  L  E   +   +  +Y + AR  T  +A G
Sbjct:   50 PEGTPYAGGMFRMKLILGKDFPAAPPKGYFLTKIFHPNVSNNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRARLMTDIHAQG 158          
BLAST of EY659372 vs. ExPASy Swiss-Prot
Match: UBC9_SCHPO (SUMO-conjugating enzyme ubc9 OS=Schizosaccharomyces pombe GN=hus5 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.647e-18
Identity = 42/102 (41.18%), Postives = 64/102 (62.75%), Query Frame = 1
Query:   22 GGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 321
            GG++ +++ FP +YP +PPK  F   +FHPN+  +G++CL IL E+  W PA+TI ++LL I  LL DPN   P   E   M+K D+ +YE   R+  ++ A
Sbjct:   55 GGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQARENA 156          
BLAST of EY659372 vs. ExPASy Swiss-Prot
Match: UBC4_ARATH (Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana GN=UBC4 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 3.457e-18
Identity = 44/114 (38.60%), Postives = 66/114 (57.89%), Query Frame = 1
Query:    1 PRVRPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLS-ICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG*EG 336
            P+   + GGV+ + +  P  YP+K P V F TK++HPN++  +GS+CLD++ + WSP   +  V  + +  LL  PNP DPL  E A +   DR  YE   + + +KYA   EG
Sbjct:   39 PKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVKEYCEKYAKPGEG 152          
BLAST of EY659372 vs. ExPASy Swiss-Prot
Match: UBC16_SCHPO (Ubiquitin-conjugating enzyme E2 16 OS=Schizosaccharomyces pombe GN=ubc16 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 3.457e-18
Identity = 45/111 (40.54%), Postives = 66/111 (59.46%), Query Frame = 1
Query:    1 PRVRPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKT-DRAKYETTARSWTQKYAMG 327
            P   P+ GG +++ IH    YP  PP V F+TK+ HPNI+ +NG +C+DILK  WSPA ++    L+I SLL++ +   PL  + A + +T D+  Y +  R  T  YA G
Sbjct:   44 PTETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCMDILKTHWSPAWSLQSACLAIISLLSNYDASSPLNVDAAKLLRTGDKTAYNSLVRCTTYLYAKG 154          
BLAST of EY659372 vs. ExPASy Swiss-Prot
Match: UBC2_SCHPO (Ubiquitin-conjugating enzyme E2 2 OS=Schizosaccharomyces pombe GN=rhp6 PE=1 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 7.701e-18
Identity = 43/107 (40.19%), Postives = 62/107 (57.94%), Query Frame = 1
Query:    1 PRVRPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSW 306
            P   PF  G F + + F   YP KPP V F + +FHPN+ +NG +CLDIL+ +WSP   ++ +L SI SLL DPN   P   E A +++ ++ +Y     +T   SW
Sbjct:   43 PADTPFEDGTFKLVLSFDEQYPNKPPLVKFVSTMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNNASPANAEAAQLHRENKKEYVRRVRKTVEDSW 149          
BLAST of EY659372 vs. ExPASy Swiss-Prot
Match: UB2SC_XENLA (Ubiquitin-conjugating enzyme E2 S-C OS=Xenopus laevis GN=ube2s-C PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 7.701e-18
Identity = 42/109 (38.53%), Postives = 64/109 (58.72%), Query Frame = 1
Query:    1 PRVRPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 327
            P   P+A G+F + +    D+P  PPK  F TK+FHPN+++NG IC+++LK+ W   L I  VLL+I  LL  PNP+  L  E   +   +  +Y + A+  T+ +A G
Sbjct:   50 PEGTPYAAGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSNNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRAKLMTEIHAQG 158          
BLAST of EY659372 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila simulans GN=GD17343 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.006e-17
Identity = 44/107 (41.12%), Postives = 59/107 (55.14%), Query Frame = 1
Query:    1 PRVRPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 321
            P   P+A G+F V +    D+P  PPK  F TK+FHPN+ +NG IC++ LK+ W P L I  +LL+I  LL  PNP+  L  E   M       Y   AR  T+ +A
Sbjct:   53 PAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHA 159          
BLAST of EY659372 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSE (Ubiquitin-conjugating enzyme E2 S OS=Drosophila sechellia GN=GM13299 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.006e-17
Identity = 44/107 (41.12%), Postives = 59/107 (55.14%), Query Frame = 1
Query:    1 PRVRPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 321
            P   P+A G+F V +    D+P  PPK  F TK+FHPN+ +NG IC++ LK+ W P L I  +LL+I  LL  PNP+  L  E   M       Y   AR  T+ +A
Sbjct:   53 PAGTPYAAGIFRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHA 159          
The following BLAST results are available for this feature:
BLAST of EY659372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 241
Match NameE-valueIdentityDescription
UBC9B_DANRE2.026e-1840.95SUMO-conjugating enzyme UBC9-B OS=Danio rerio GN=u... [more]
UBC9A_DANRE2.026e-1840.95SUMO-conjugating enzyme UBC9-A OS=Danio rerio GN=u... [more]
UB2SB_XENLA2.026e-1840.37Ubiquitin-conjugating enzyme E2 S-B OS=Xenopus lae... [more]
UBC9_SCHPO2.647e-1841.18SUMO-conjugating enzyme ubc9 OS=Schizosaccharomyce... [more]
UBC4_ARATH3.457e-1838.60Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis t... [more]
UBC16_SCHPO3.457e-1840.54Ubiquitin-conjugating enzyme E2 16 OS=Schizosaccha... [more]
UBC2_SCHPO7.701e-1840.19Ubiquitin-conjugating enzyme E2 2 OS=Schizosacchar... [more]
UB2SC_XENLA7.701e-1838.53Ubiquitin-conjugating enzyme E2 S-C OS=Xenopus lae... [more]
UBE2S_DROSI1.006e-1741.12Ubiquitin-conjugating enzyme E2 S OS=Drosophila si... [more]
UBE2S_DROSE1.006e-1741.12Ubiquitin-conjugating enzyme E2 S OS=Drosophila se... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-D10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659372 ID=EY659372; Name=EY659372; organism=Citrus sinensis; type=EST; length=557bp
CCACGCGTCCGCCCATTTGCTGGCGGTGTATTTCTTGTATCCATTCATTT
CCCACCTGATTATCCATTCAAGCCACCGAAGGTGGCCTTCCGTACTAAGG
TTTTCCACCCTAACATCAACAGCAATGGTAGCATCTGTCTTGACATTCTC
AAGGAGCAGTGGAGCCCTGCTTTGACAATATCCAAGGTACTTCTGTCAAT
TTGCTCACTACTTACTGATCCGAACCCAGATGACCCACTTGTGCCTGAGA
TTGCTCACATGTACAAGACTGACAGAGCCAAATATGAGACTACTGCTCGA
TCCTGGACTCAGAAGTATGCCATGGGTTAAGAGGGGCTAGGCTGTATGCC
CCTGAGAACATTAATGGCTTGTGGTCCTATTAGTAAATAATAGAAATAAG
TTTGTTTCAGATATTAAAAGACGATATTTGGTTTTGTTTACTAAGTTGTT
AAAAGGTTTTATGTGGGGTTACTTTCAAATTTAGCATTGTTCTTCAATAC
TTAAATTATAATTTACTGCAGAATTGAGCTGCCTTTGCCTTTAAAAAAAA
AAAAAAA
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