EY659370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659370 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.239e-31 Identity = 87/196 (44.39%), Postives = 111/196 (56.63%), Query Frame = 3 Query: 264 WYGPDRRIFLPEGLLDRSE-IPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGFSKDPDHLHC*K*RR-SDGRLAMFCMLGXLLKLMSQVKGQL 830 WYGPDR P+ L SE P YLTGE PGDYG+D +S P+ F+K + E+IH RWAMLGA G + PE K G G EAVWFK GA + L+Y G I + A+ A ++VL+G E YR+ G E D L PGG FDPLG + DP+ K + +GRLAMF M G ++ + KG + Sbjct: 50 WYGPDR----PKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFG-EAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPLLPGGAFDPLGLADDPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 240
BLAST of EY659370 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.064e-30 Identity = 76/177 (42.94%), Postives = 105/177 (59.32%), Query Frame = 3 Query: 318 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGFSKDPDHLHC*K*RR-SDGRLAMFCMLGXLLKLMSQVKGQL 830 E P YLTGE PGDYG+D GLS P+ F+K + E+IH+ WAMLGA G + PE ++ G G EAVWFK G+ + L+Y G + + A+ A ++VL+G E YRI G ++ D ++PGG FDPLG + DP+ K + +GRLAMF M G ++ + KG L Sbjct: 5 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 180
BLAST of EY659370 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 3.096e-30 Identity = 76/163 (46.63%), Postives = 98/163 (60.12%), Query Frame = 3 Query: 264 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFA--VIA----EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGFSKDPD 728 WYGPDR +L + P YLTGE PGDYG+D GLS P+ F+K + E+IH RWAMLGA G + PE K G G EAVWFK G+ + L+Y G NLV A ++A ++VL+G E YR+ G E D+L+PGG FDPLG ++DP+ Sbjct: 48 WYGPDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFG-EAVWFKAGSQIFQEGGLDYLGNP---NLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDQLYPGGAFDPLGLAEDPE 203
BLAST of EY659370 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.537e-29 Identity = 81/196 (41.33%), Postives = 109/196 (55.61%), Query Frame = 3 Query: 264 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITN--GLDLEDKLHPGGP-FDPLGFSKDPDHLHC*K*RR-SDGRLAMFCMLGXLLKLMSQVKGQL 830 WYGPDR +L ++ P YL GE PGDYG+D GLS P+ F+K +A E+IH RWAMLGA G I PE K+ E VWFK G+ + L+Y G + + AV+ ++VL+G E +RI G+ + L+PGG FDPLG + DP K + +GRLAMF M G ++ + KG L Sbjct: 47 WYGPDRVKYLGPF---SAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 239
BLAST of EY659370 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.839e-29 Identity = 79/197 (40.10%), Postives = 107/197 (54.31%), Query Frame = 3 Query: 261 KWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAF-NKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI---NLVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGFSKDPDHLHC*K*RR-SDGRLAMFCMLGXLLKLMSQVKGQL 830 ++YGPD G + + P TGE PGDYG+D GLS P+ F +Y+ ELIHAR +LGA G + PE ++ G G A+WFK GA + LNY G I N+V + ++VL+G E YR+ G E D L+PG FDPLG + DPD K + +GRLAMF LG ++ + KG + Sbjct: 56 QFYGPDAT----SGWDLQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYRVNGGPAGEGLDPLYPGEAFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPI 248
BLAST of EY659370 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 9.961e-29 Identity = 81/197 (41.12%), Postives = 111/197 (56.35%), Query Frame = 3 Query: 264 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGLD---LEDKLHPGGP-FDPLGFSKDPDHLHC*K*RR-SDGRLAMFCMLGXLLKLMSQVKGQL 830 WYGPDR +L ++ P YL GE PGDYG+D GLS P+ F++ +A E+IH RWAMLGA G + PE K+ E VWFK G+ + L+Y G + + AV+ +++L+G E +RI NGLD + L+PGG FDPLG + DP K + +GRLAMF M G ++ + KG L Sbjct: 50 WYGPDRVKYLGPF---SAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRI-NGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 242
BLAST of EY659370 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.101e-27 Identity = 79/195 (40.51%), Postives = 107/195 (54.87%), Query Frame = 3 Query: 264 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGFSKDPDHLHC*K*RR-SDGRLAMFCMLGXLLKLMSQVKGQL 830 WYGPDR +L E P YLTGE GLS P+ F+K + E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I + A+ A +++L+G E YRI G ++ D ++PGG FDPLG + DP+ L K + +GRLAMF M G ++ + KG L Sbjct: 48 WYGPDRVKYLGPF---SGEAPSYLTGEF--------HGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEALAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 230
BLAST of EY659370 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.878e-27 Identity = 76/195 (38.97%), Postives = 107/195 (54.87%), Query Frame = 3 Query: 264 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGFSKDPDHLHC*K*RR-SDGRLAMFCMLGXLLKLMSQVKGQL 830 WYG DR ++L G L S P YLTGE PGDYG+D GLS P+ F+K + E+IH RWA+ G + PE + G G E VWFK G+ + L++ G + + A+ A ++VL+G E Y + G ++ D L+ GG FDPLG DP+ K + +GRLAMF M G ++ + KG + Sbjct: 48 WYGADRVLYL--GPLSGSP-PSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFG-EGVWFKAGSQIFSEGGLSHPGNPSLVHAQSILAIWACQVVLMGAVEGYHVAGGRLGEVVDPLYLGGSFDPLGLGDDPERFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 238
BLAST of EY659370 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.539e-24 Identity = 71/177 (40.11%), Postives = 99/177 (55.93%), Query Frame = 3 Query: 318 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAV-IAEIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGFSKDPDHLHC*K*RR-SDGRLAMFCMLGXLLKLMSQVKGQL 830 E P YLTGE PGDYG+D GLS P+ F+K + E+IH+R AM A G I PE + G G EAVWFK GA + L+Y G + + A+ +++L+G E YRI G ++ D L+PG FD LG ++D + K + +GRLAMF M G ++ + K +L Sbjct: 68 EWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMGAVEGYRIARGPLGEVTDPLYPGS-FDSLGLAEDTEAFAELKVKELKNGRLAMFSMFGFFVQAIVSRKDRL 242
BLAST of EY659370 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.794e-20 Identity = 63/158 (39.87%), Postives = 83/158 (52.53%), Query Frame = 3 Query: 324 PEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI-NLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGFSKDPDHLHC*K*RR-SDGRLAMFCMLG 791 P +L G PGD+G+DP GL+ P++F +++ E+ H RWAML G ++PEA N W A L DG Y G +P NL + E + + AE R T D E K +PGG FDPLGFSKDP K + +GRLAM +G Sbjct: 55 PAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGL--GNWVKAQEW----AALPDGQA-TYLGNPVPWGNLPTILAIEFLAIAFAEQQR-TMEKDPEKKKYPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVG 204 The following BLAST results are available for this feature:
BLAST of EY659370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659370 ID=EY659370; Name=EY659370; organism=Citrus sinensis; type=EST; length=878bpback to top |