EY659350

Overview
NameEY659350
Unique NameEY659350
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_RHILO (Glycine dehydrogenase [decarboxylating] OS=Rhizobium loti GN=gcvP PE=3 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 5.237e-75
Identity = 133/235 (56.60%), Postives = 171/235 (72.77%), Query Frame = 2
Query:   47 ASLAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            A  A   ++ +P G  R   +LT PVFN+  +E +++R +  L  K+L+L  SMIPLGSCTMKLNA  EMMPV+WPS A++HPFAPA  + GY+ M   L  WL  ITGFD+ SLQPNAG+ GEYAGL+ IRAYH++RG+ HR VC+IP SAHGTNPA+AAM GM +V V     GNI+++++R  A  +  NL+ LM TYPSTHGVYEEG   +C +IH++GGQVY DGAN+NA
Sbjct:  432 AKAAPSADSTVP-GKPRGKEFLTQPVFNENKSETDMMRLLRRLADKDLALDRSMIPLGSCTMKLNAAAEMMPVSWPSIADLHPFAPASHSAGYRAMIGELEGWLSEITGFDAVSLQPNAGSQGEYAGLLAIRAYHRSRGEGHRTVCLIPSSAHGTNPASAAMAGMSVVVVRCLEDGNIDMDDMRAKANEHSKNLAALMFTYPSTHGVYEEGARHLCALIHEHGGQVYFDGANLNA 665          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_STRAW (Glycine dehydrogenase [decarboxylating] OS=Streptomyces avermitilis GN=gcvP PE=3 SV=2)

HSP 1 Score: 280.796 bits (717), Expect = 6.840e-75
Identity = 132/234 (56.41%), Postives = 166/234 (70.94%), Query Frame = 2
Query:   50 SLAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            +L    E  +P+ L R   YLT PVF++Y +E  +LRY+  L  ++ +L   MIPLGSCTMKLNATTEM PVTWP F  +HPFAPA+QAQGY  +   L E L  +TG+D  SLQPNAG+ GE AGL+ +R YH+A GD  R VC+IP SAHGTN A+A M GMK+V V T   G I++E+LR   E  RD LS LM+TYPSTHGV+EE + +IC  +H+ GGQVY+DGAN+NA
Sbjct:  455 ALDAAAEDTLPAALLRTDDYLTHPVFHQYRSETAMLRYLRRLSDRDYALDRGMIPLGSCTMKLNATTEMEPVTWPEFGQLHPFAPAEQAQGYLTLIRELEERLAEVTGYDKVSLQPNAGSQGELAGLLAVRGYHRANGDEQRTVCLIPSSAHGTNAASAVMAGMKVVVVKTADDGEIDVEDLRAKIEQYRDELSVLMITYPSTHGVFEEHVADICAQVHEAGGQVYVDGANLNA 688          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_STRCO (Glycine dehydrogenase [decarboxylating] OS=Streptomyces coelicolor GN=gcvP PE=3 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 2.599e-74
Identity = 130/234 (55.56%), Postives = 167/234 (71.37%), Query Frame = 2
Query:   50 SLAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            SL  E    +P  L R   +LT PVF+++ +E  +LRY+  L  ++ +L   MIPLGSCTMKLNATTEM PVTWP F  +HPFAPA+QAQGY  +   L E L  +TG+D  SLQPNAG+ GE+AGL+ +R YH+A GD  R VC+IP SAHGTN A+A M GMK+V V T   G I++E+LR   + +RD L+ LM+TYPSTHGV+EE + +IC  +HD GGQVY+DGAN+NA
Sbjct:  455 SLDAEAGETLPEALLRTDDFLTHPVFHQHRSETAMLRYLRRLADRDYALDRGMIPLGSCTMKLNATTEMEPVTWPEFGALHPFAPAEQAQGYLTLIRELEERLAEVTGYDKVSLQPNAGSQGEFAGLLAVRGYHRANGDEQRTVCLIPSSAHGTNAASAVMAGMKVVVVKTAEDGEIDVEDLRAKIDKHRDELAVLMITYPSTHGVFEEHVADICAQVHDAGGQVYVDGANLNA 688          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_PROMM (Glycine dehydrogenase [decarboxylating] OS=Prochlorococcus marinus (strain MIT 9313) GN=gcvP PE=3 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 2.599e-74
Identity = 132/245 (53.88%), Postives = 173/245 (70.61%), Query Frame = 2
Query:   17 AGGKSVPFTAASLAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            A G+ VP         +E  +   L R+ P+L   VF++Y +E ELLRY+  L  ++LSL H MIPLGSCTMKLNA  E++P++W  FA +HPFAP DQ QGYQ +  +L  W   ITGF   SLQPNAG+ GE AGL+VIRA+H +RG+  R+VC+IP SAHGTNPAT  M G+++V V  DA GN+++ +L   AEA+   L+ LMVTYPSTHGV+E  I EIC+++H +GGQVY+DGAN+NA
Sbjct:  437 AAGQPVPVLEDPGNPHLEELVGLPL-RQRPWLQQQVFHRYRSETELLRYLQRLVGRDLSLVHGMIPLGSCTMKLNAAAELIPISWREFAALHPFAPQDQCQGYQRLVQDLEHWFADITGFAGVSLQPNAGSQGELAGLLVIRAWHHSRGEQQRDVCLIPTSAHGTNPATCVMAGLRVVPVACDADGNVDLNDLASKAEAHAPQLAALMVTYPSTHGVFEPQIREICELVHGHGGQVYLDGANLNA 680          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_SCHPO (Putative glycine dehydrogenase [decarboxylating], mitochondrial OS=Schizosaccharomyces pombe GN=SPAC13G6.06c PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 4.433e-74
Identity = 129/226 (57.08%), Postives = 169/226 (74.78%), Query Frame = 2
Query:   74 AIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            ++P    R + YL  PVFN+YH+E EL+RYIH LQSK+LSL H+M PLGSCTMKLNA TEMMP+T P FANIHP+ P +QA+GY+ +  +L   L TITGFD+   QPN+GAAGEY GL VIRAY ++ G  HRN+C+IPVSAHGTNPA+AAM G  ++ V     G +++++L++ A  + D L+  MVTYPST G++E  + E  ++IH++GGQVY DGANMNA
Sbjct:  523 SLPENFRRTTLYLQHPVFNRYHSETELMRYIHHLQSKDLSLAHAMTPLGSCTMKLNAVTEMMPITNPLFANIHPYVPEEQAKGYRHVIEDLQLMLTTITGFDAACFQPNSGAAGEYTGLSVIRAYQRSIGQGHRNICLIPVSAHGTNPASAAMAGFTVIPVKCLNNGYLDMQDLKEKASKHADKLAAFMVTYPSTFGIFEPDVKEALEVIHEHGGQVYFDGANMNA 748          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_PROMT (Glycine dehydrogenase [decarboxylating] OS=Prochlorococcus marinus (strain NATL2A) GN=gcvP PE=3 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 4.433e-74
Identity = 124/219 (56.62%), Postives = 166/219 (75.80%), Query Frame = 2
Query:   95 RESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            RE  +L   VFN+Y +E +L+RYIH L SK+ SL   MIPLGSCTMKLNA  E++P+ W  F++IHPFAP  Q  G+ E+ N+L  WL  +TGF   SLQPNAG+ GE+AGL+VIR++H++ G+ HRN+C+IP SAHGTNPA+A M G K+VSV  D  GN+++E+L+  ++ +  NL+ LMVTYPSTHGV+E  I E+C++IH  GGQVY+DGAN+NA
Sbjct:  473 REKSWLEQSVFNQYQSETDLMRYIHCLVSKDFSLVQGMIPLGSCTMKLNAAAELLPIEWREFSSIHPFAPHTQLTGFHEIINDLENWLSALTGFQGVSLQPNAGSQGEFAGLLVIRSWHQSLGEGHRNICLIPTSAHGTNPASAVMSGFKVVSVKCDEYGNVDLEDLKNKSKIHSKNLAALMVTYPSTHGVFEPNIREMCQVIHQEGGQVYLDGANLNA 691          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_BARHE (Glycine dehydrogenase [decarboxylating] OS=Bartonella henselae GN=gcvP PE=3 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 5.790e-74
Identity = 123/222 (55.41%), Postives = 168/222 (75.68%), Query Frame = 2
Query:   86 GLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            G  R++ +L+ P F+  H+E +++R++  L  K+L+L  +MIPLGSCTMKLNA  E+MPV+WP+ ANIHPFA  + A GYQEM + L  WLC ITGF   S QPN+GA GEYAGL+ IR YH++RG+H R +C+IP SAHGTNPA+A M GM++V V     G++++++L+  A+  ++ L+ LM+TYPSTHGVYEE I +IC +IH+NGGQVY DGAN+NA
Sbjct:  442 GKGRDTTFLSQPFFHAVHSETDMMRFLRRLSDKDLALDRAMIPLGSCTMKLNAAAELMPVSWPTVANIHPFASREDAVGYQEMIHQLNAWLCEITGFAQVSFQPNSGAQGEYAGLLAIRRYHQSRGEHQRTLCLIPASAHGTNPASAHMAGMEVVVVKCLNDGDVDLDDLKMKAQLYKERLAALMITYPSTHGVYEESIKDICSLIHENGGQVYFDGANLNA 663          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_PROM3 (Glycine dehydrogenase [decarboxylating] OS=Prochlorococcus marinus (strain MIT 9303) GN=gcvP PE=3 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 7.562e-74
Identity = 125/219 (57.08%), Postives = 164/219 (74.89%), Query Frame = 2
Query:   95 RESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            R+ P+L   VF++Y +E ELLRY+  L  ++LSL H MIPLGSCTMKLNA  E++P++W  FA +HPFAP DQ  GYQ +  +L  W   ITGF   SLQPNAG+ GE AGL+VIRA+H +RG+  R+VC+IP SAHGTNPAT  M G+++V V  DA+GN+++ +L   AEA+   L+ LMVTYPSTHGV+E  I EIC+++H +GGQVY+DGAN+NA
Sbjct:  482 RQRPWLQQQVFHRYRSETELLRYLQRLVGRDLSLVHGMIPLGSCTMKLNAAAELIPISWREFAALHPFAPQDQCHGYQRLVQDLEHWFAEITGFAGVSLQPNAGSQGELAGLLVIRAWHHSRGEQQRDVCLIPTSAHGTNPATCVMAGLRVVPVACDAEGNVDLNDLASKAEAHAPQLAALMVTYPSTHGVFEPQIREICELVHGHGGQVYLDGANLNA 700          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_PROM1 (Glycine dehydrogenase [decarboxylating] OS=Prochlorococcus marinus (strain NATL1A) GN=gcvP PE=3 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.685e-73
Identity = 123/219 (56.16%), Postives = 166/219 (75.80%), Query Frame = 2
Query:   95 RESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            RE  +L   VFN+Y +E +L+RYIH L SK+ SL   MIPLGSCTMKLN+  E++P+ W  F++IHPFAP  Q  G+ E+ N+L  WL  +TGF   SLQPNAG+ GE+AGL+VIR++H++ G+ HRN+C+IP SAHGTNPA+A M G K+VSV  D  GN+++E+L+  ++ +  NL+ LMVTYPSTHGV+E  I E+C++IH  GGQVY+DGAN+NA
Sbjct:  473 REKSWLEQSVFNQYQSETDLMRYIHSLVSKDFSLVQGMIPLGSCTMKLNSAAELLPIEWREFSSIHPFAPHAQLAGFHEIINDLENWLSALTGFQGVSLQPNAGSQGEFAGLLVIRSWHQSLGEGHRNICLIPTSAHGTNPASAVMSGFKVVSVKCDEYGNVDLEDLKNKSKIHSKNLAALMVTYPSTHGVFEPNIREMCQVIHQEGGQVYLDGANLNA 691          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_MYCA1 (Glycine dehydrogenase [decarboxylating] OS=Mycobacterium avium (strain 104) GN=gcvP PE=3 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.874e-73
Identity = 125/220 (56.82%), Postives = 161/220 (73.18%), Query Frame = 2
Query:   92 TRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            TR S +LT P F +Y TE  ++RY+  L  K+++L  SMIPLGSCTMKLNA  EM P+TWP FA  HPFAPA    G + +  +L  WL  ITG+D+ SLQPNAG+ GEYAGL+ I  YH +RG+ HR++C+IP SAHGTN A+AA+ GM++V VG    G++++++LR     +RD LSTLM+TYPSTHGVYE  I EIC  +HD GGQVY+DGAN+NA
Sbjct:  452 TRTSEFLTHPAFTQYRTETAMMRYLRTLADKDIALDRSMIPLGSCTMKLNAAAEMEPITWPEFARQHPFAPASDTPGLRRLIGDLENWLVAITGYDAVSLQPNAGSQGEYAGLLAIHDYHASRGEPHRDICLIPSSAHGTNAASAALAGMRVVVVGCHDNGDVDLDDLRAKVTDHRDRLSTLMITYPSTHGVYEHDIAEICAAVHDAGGQVYVDGANLNA 671          
The following BLAST results are available for this feature:
BLAST of EY659350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
GCSP_RHILO5.237e-7556.60Glycine dehydrogenase [decarboxylating] OS=Rhizobi... [more]
GCSP_STRAW6.840e-7556.41Glycine dehydrogenase [decarboxylating] OS=Strepto... [more]
GCSP_STRCO2.599e-7455.56Glycine dehydrogenase [decarboxylating] OS=Strepto... [more]
GCSP_PROMM2.599e-7453.88Glycine dehydrogenase [decarboxylating] OS=Prochlo... [more]
GCSP_SCHPO4.433e-7457.08Putative glycine dehydrogenase [decarboxylating], ... [more]
GCSP_PROMT4.433e-7456.62Glycine dehydrogenase [decarboxylating] OS=Prochlo... [more]
GCSP_BARHE5.790e-7455.41Glycine dehydrogenase [decarboxylating] OS=Bartone... [more]
GCSP_PROM37.562e-7457.08Glycine dehydrogenase [decarboxylating] OS=Prochlo... [more]
GCSP_PROM11.685e-7356.16Glycine dehydrogenase [decarboxylating] OS=Prochlo... [more]
GCSP_MYCA12.874e-7356.82Glycine dehydrogenase [decarboxylating] OS=Mycobac... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-B11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659350 ID=EY659350; Name=EY659350; organism=Citrus sinensis; type=EST; length=862bp
AGCTTTTCTACTTTTCGCCGGGGGCAAATCAGTTCCATTCACTGCTGCAT
CTCTGGCTGAAGAGGTTGAGACTGCAATTCCGTCTGGATTAACAAGGGAG
AGTCCGTATCTGACAGATCCTGTTTTTAACAAATACCACACAGAGCATGA
ATTGCTTAGATACATTCATCTGTTACAATCAAAGGAGCTCTCACTATGCC
ATAGTATGATTCCATTGGGATCTTGTACAATGAAATTGAATGCAACAACT
GAAATGATGCCAGTGACATGGCCTAGCTTTGCTAACATACACCCTTTTGC
CCCTGCTGACCAGGCTCAGGGTTATCAGGAAATGTTTAACAATCTGGGTG
AGTGGCTGTGTACCATTACTGGCTTTGACTCTTTCTCTTTGCAACCAAAT
GCTGGTGCAGCTGGTGAGTATGCTGGGCTCATGGTTATCCGCGCTTATCA
TAAGGCAAGAGGAGACCATCACCGCAATGTGTGCATTATACCCGTGTCAG
CCCATGGGACAAATCCTGCTACTGCTGCCATGTGTGGAATGAAGATTGTT
TCTGTTGGAACTGATGCCAAGGGTAACATCAACATTGAAGAGTTAAGGAA
GGCCGCAGAAGCTAATAGGGACAACCTATCAACCCTTATGGTAACGTACC
CTTCAACTCATGGAGTTTATGAAGAAGGTATTGATGAGATATGCAAGATA
ATTCACGATAATGGAGGTCAAGTATATATGGACGGGGCTAACATGAATGC
TCANGGTCGTCTGACAGCCCTGGNTACATTGGAGCTGATGTTTGCATCTC
ATCTCCACAACATTTGCATTCGCATGGAGTGGNTGTCCCTGTATGGGCCT
ATTGTGTGAAGA
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