EY659350

Overview
NameEY659350
Unique NameEY659350
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12632 contig Csv1_Contig12632:598..1460. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_BACAC (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.632e-42
Identity = 85/204 (41.67%), Postives = 129/204 (63.24%), Query Frame = 2 
Query:  140 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            +E +++R+   L ++   +     PLGSCTMK N         +  FANIHP       QG  E+  +L E L  ITG D+ +LQP AGA GE+ GLM+IRAYH+A GD +R   I+P SAHGTNPA+A + G + ++V ++  G +++E+L++      +  + LM+T P+T G++EE I E+ +I+H+ GG++Y DGAN+NA
Sbjct:   52 SELDIMRHYTALSNRNHGVDSGFYPLGSCTMKYNPKINESVARFAGFANIHPLQDEKTVQGAMELMYDLQEHLIEITGMDTVTLQPAAGAHGEWTGLMLIRAYHEANGDFNRTKVIVPDSAHGTNPASATVAGFETITVKSNEHGLVDLEDLKRVV---NEETAALMLTNPNTLGLFEENILEMAEIVHNAGGKLYYDGANLNA 252
[Close]
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_BACAA (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Bacillus anthracis (strain A0248) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.632e-42
Identity = 85/204 (41.67%), Postives = 129/204 (63.24%), Query Frame = 2 
Query:  140 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            +E +++R+   L ++   +     PLGSCTMK N         +  FANIHP       QG  E+  +L E L  ITG D+ +LQP AGA GE+ GLM+IRAYH+A GD +R   I+P SAHGTNPA+A + G + ++V ++  G +++E+L++      +  + LM+T P+T G++EE I E+ +I+H+ GG++Y DGAN+NA
Sbjct:   52 SELDIMRHYTALSNRNHGVDSGFYPLGSCTMKYNPKINESVARFAGFANIHPLQDEKTVQGAMELMYDLQEHLIEITGMDTVTLQPAAGAHGEWTGLMLIRAYHEANGDFNRTKVIVPDSAHGTNPASATVAGFETITVKSNEHGLVDLEDLKRVV---NEETAALMLTNPNTLGLFEENILEMAEIVHNAGGKLYYDGANLNA 252
[Close]
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_LISW6 (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.302e-41
Identity = 88/204 (43.14%), Postives = 127/204 (62.25%), Query Frame = 2 
Query:  140 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            +E E++R+   L +    +     PLGSCTMK N         +P FANIHP  P    QG  E+  +L   L  ITG D  +LQP AGA GE+ GLM+IRA+H+  GD  R   IIP SAHGTNPA+AA+ G  +V+V ++ KG +++ +L+K      ++ + LM+T P+T G++E+ I E+ +I+H  GG++Y DGAN+NA
Sbjct:   53 SELEIMRHYTNLSNHNFGVDSGFYPLGSCTMKYNPKINEKVARFPGFANIHPNQPESSVQGALELLYDLQTSLVEITGMDEVTLQPAAGAHGEWTGLMLIRAFHEKNGDTKRTKVIIPDSAHGTNPASAAVAGFDVVTVKSNEKGLVDVADLKKVV---GEDTAALMLTNPNTLGLFEKDIVEMAEIVHAAGGKLYYDGANLNA 253
[Close]
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_LISIN (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Listeria innocua GN=gcvPB PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.302e-41
Identity = 88/204 (43.14%), Postives = 127/204 (62.25%), Query Frame = 2 
Query:  140 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            +E E++R+   L +    +     PLGSCTMK N         +P FANIHP  P    QG  E+  +L   L  ITG D  +LQP AGA GE+ GLM+IRA+H+  GD  R   IIP SAHGTNPA+AA+ G  +V+V ++ KG +++ +L+K      ++ + LM+T P+T G++E+ I E+ +I+H  GG++Y DGAN+NA
Sbjct:   53 SELEIMRHYTNLSNHNFGVDSGFYPLGSCTMKYNPKINEKVARFPGFANIHPNQPESSVQGALELLYDLQTSLVEITGMDEVTLQPAAGAHGEWTGLMLIRAFHEKNGDTKRTKVIIPDSAHGTNPASAAVAGFDVVTVKSNEKGLVDVADLKKVV---GEDTAALMLTNPNTLGLFEKDIVEMAEIVHAAGGKLYYDGANLNA 253
[Close]
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_STAAW (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Staphylococcus aureus (strain MW2) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.221e-41
Identity = 85/203 (41.87%), Postives = 127/203 (62.56%), Query Frame = 2 
Query:  143 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            E +L+R+   L +K   + +   PLGSCTMK N          P F+  HP    DQ QG  E+  +L E L  ITG D  +LQP AGA GE+  LM+ +AYH+  G+ HR+  I+P SAHGTNPA+A+  G K V+V ++ +G ++I++L++      +N + +M+T P+T G++E+ I EI +I+H+ GG +Y DGAN+NA
Sbjct:   53 ELDLVRHYTELSNKNFGVDNGFYPLGSCTMKYNPKINEKVARIPGFSESHPLQDEDQVQGSLEIIYSLQEELKEITGMDEVTLQPAAGAHGEWTALMIFKAYHENNGEGHRDEVIVPDSAHGTNPASASFAGFKSVTVKSNERGEVDIDDLKRVV---NENTAAIMLTNPNTLGIFEKNIMEIREIVHNAGGLLYYDGANLNA 252
[Close]
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_STAAT (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.221e-41
Identity = 85/203 (41.87%), Postives = 127/203 (62.56%), Query Frame = 2 
Query:  143 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            E +L+R+   L +K   + +   PLGSCTMK N          P F+  HP    DQ QG  E+  +L E L  ITG D  +LQP AGA GE+  LM+ +AYH+  G+ HR+  I+P SAHGTNPA+A+  G K V+V ++ +G ++I++L++      +N + +M+T P+T G++E+ I EI +I+H+ GG +Y DGAN+NA
Sbjct:   53 ELDLVRHYTELSNKNFGVDNGFYPLGSCTMKYNPKINEKVARIPGFSESHPLQDEDQVQGSLEIIYSLQEELKEITGMDEVTLQPAAGAHGEWTALMIFKAYHENNGEGHRDEVIVPDSAHGTNPASASFAGFKSVTVKSNERGEVDIDDLKRVV---NENTAAIMLTNPNTLGIFEKNIMEIREIVHNAGGLLYYDGANLNA 252
[Close]
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_STAAS (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Staphylococcus aureus (strain MSSA476) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.221e-41
Identity = 85/203 (41.87%), Postives = 127/203 (62.56%), Query Frame = 2 
Query:  143 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            E +L+R+   L +K   + +   PLGSCTMK N          P F+  HP    DQ QG  E+  +L E L  ITG D  +LQP AGA GE+  LM+ +AYH+  G+ HR+  I+P SAHGTNPA+A+  G K V+V ++ +G ++I++L++      +N + +M+T P+T G++E+ I EI +I+H+ GG +Y DGAN+NA
Sbjct:   53 ELDLVRHYTELSNKNFGVDNGFYPLGSCTMKYNPKINEKVARIPGFSESHPLQDEDQVQGSLEIIYSLQEELKEITGMDEVTLQPAAGAHGEWTALMIFKAYHENNGEGHRDEVIVPDSAHGTNPASASFAGFKSVTVKSNERGEVDIDDLKRVV---NENTAAIMLTNPNTLGIFEKNIMEIREIVHNAGGLLYYDGANLNA 252
[Close]
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_STAAR (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Staphylococcus aureus (strain MRSA252) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.221e-41
Identity = 85/203 (41.87%), Postives = 127/203 (62.56%), Query Frame = 2 
Query:  143 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            E +L+R+   L +K   + +   PLGSCTMK N          P F+  HP    DQ QG  E+  +L E L  ITG D  +LQP AGA GE+  LM+ +AYH+  G+ HR+  I+P SAHGTNPA+A+  G K V+V ++ +G ++I++L++      +N + +M+T P+T G++E+ I EI +I+H+ GG +Y DGAN+NA
Sbjct:   53 ELDLVRHYTELSNKNFGVDNGFYPLGSCTMKYNPKINEKVARIPGFSESHPLQDEDQVQGSLEIIYSLQEELKEITGMDEVTLQPAAGAHGEWTALMIFKAYHENNGEGHRDEVIVPDSAHGTNPASASFAGFKSVTVKSNERGEVDIDDLKRVV---NENTAAIMLTNPNTLGIFEKNIMEIREIVHNAGGLLYYDGANLNA 252
[Close]
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_STAAN (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Staphylococcus aureus (strain N315) GN=gcvPB PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.221e-41
Identity = 85/203 (41.87%), Postives = 127/203 (62.56%), Query Frame = 2 
Query:  143 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            E +L+R+   L +K   + +   PLGSCTMK N          P F+  HP    DQ QG  E+  +L E L  ITG D  +LQP AGA GE+  LM+ +AYH+  G+ HR+  I+P SAHGTNPA+A+  G K V+V ++ +G ++I++L++      +N + +M+T P+T G++E+ I EI +I+H+ GG +Y DGAN+NA
Sbjct:   53 ELDLVRHYTELSNKNFGVDNGFYPLGSCTMKYNPKINEKVARIPGFSESHPLQDEDQVQGSLEIIYSLQEELKEITGMDEVTLQPAAGAHGEWTALMIFKAYHENNGEGHRDEVIVPDSAHGTNPASASFAGFKSVTVKSNERGEVDIDDLKRVV---NENTAAIMLTNPNTLGIFEKNIMEIREIVHNAGGLLYYDGANLNA 252
[Close]
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_STAAM (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gcvPB PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.221e-41
Identity = 85/203 (41.87%), Postives = 127/203 (62.56%), Query Frame = 2 
Query:  143 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            E +L+R+   L +K   + +   PLGSCTMK N          P F+  HP    DQ QG  E+  +L E L  ITG D  +LQP AGA GE+  LM+ +AYH+  G+ HR+  I+P SAHGTNPA+A+  G K V+V ++ +G ++I++L++      +N + +M+T P+T G++E+ I EI +I+H+ GG +Y DGAN+NA
Sbjct:   53 ELDLVRHYTELSNKNFGVDNGFYPLGSCTMKYNPKINEKVARIPGFSESHPLQDEDQVQGSLEIIYSLQEELKEITGMDEVTLQPAAGAHGEWTALMIFKAYHENNGEGHRDEVIVPDSAHGTNPASASFAGFKSVTVKSNERGEVDIDDLKRVV---NENTAAIMLTNPNTLGIFEKNIMEIREIVHNAGGLLYYDGANLNA 252
The following BLAST results are available for this feature:
BLAST of EY659350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
GCSPB_BACAC7.632e-4241.67Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_BACAA7.632e-4241.67Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_LISW61.302e-4143.14Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_LISIN1.302e-4143.14Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_STAAW2.221e-4141.87Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_STAAT2.221e-4141.87Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_STAAS2.221e-4141.87Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_STAAR2.221e-4141.87Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_STAAN2.221e-4141.87Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_STAAM2.221e-4141.87Probable glycine dehydrogenase [decarboxylating] s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-B11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659350 ID=EY659350; Name=EY659350; organism=Citrus sinensis; type=EST; length=862bp
AGCTTTTCTACTTTTCGCCGGGGGCAAATCAGTTCCATTCACTGCTGCAT
CTCTGGCTGAAGAGGTTGAGACTGCAATTCCGTCTGGATTAACAAGGGAG
AGTCCGTATCTGACAGATCCTGTTTTTAACAAATACCACACAGAGCATGA
ATTGCTTAGATACATTCATCTGTTACAATCAAAGGAGCTCTCACTATGCC
ATAGTATGATTCCATTGGGATCTTGTACAATGAAATTGAATGCAACAACT
GAAATGATGCCAGTGACATGGCCTAGCTTTGCTAACATACACCCTTTTGC
CCCTGCTGACCAGGCTCAGGGTTATCAGGAAATGTTTAACAATCTGGGTG
AGTGGCTGTGTACCATTACTGGCTTTGACTCTTTCTCTTTGCAACCAAAT
GCTGGTGCAGCTGGTGAGTATGCTGGGCTCATGGTTATCCGCGCTTATCA
TAAGGCAAGAGGAGACCATCACCGCAATGTGTGCATTATACCCGTGTCAG
CCCATGGGACAAATCCTGCTACTGCTGCCATGTGTGGAATGAAGATTGTT
TCTGTTGGAACTGATGCCAAGGGTAACATCAACATTGAAGAGTTAAGGAA
GGCCGCAGAAGCTAATAGGGACAACCTATCAACCCTTATGGTAACGTACC
CTTCAACTCATGGAGTTTATGAAGAAGGTATTGATGAGATATGCAAGATA
ATTCACGATAATGGAGGTCAAGTATATATGGACGGGGCTAACATGAATGC
TCANGGTCGTCTGACAGCCCTGGNTACATTGGAGCTGATGTTTGCATCTC
ATCTCCACAACATTTGCATTCGCATGGAGTGGNTGTCCCTGTATGGGCCT
ATTGTGTGAAGA
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