EY659350

Overview
NameEY659350
Unique NameEY659350
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12632 contig Csv1_Contig12632:598..1460. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_COXB2 (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Coxiella burnetii (strain CbuG_Q212) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 2.009e-42
Identity = 96/238 (40.34%), Postives = 144/238 (60.50%), Query Frame = 2
Query:   44 AASLAEEVETA-IPSGLTR-ESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            A ++A++++   IP+ L R ++P L +       +E E++R+   L  +  S+     PLGSCTMK N        + P +   HP +PA Q+Q + +    L   L  ITG +  SL   AGA GE+AG+ +I+AYH++RGD+ R   I+P +AHGTNPA+AAMCG  +  + T   G+I++E+LR+ A A     + +M+T PST GV+E  I E+ KIIH+ GG +Y DGAN+NA
Sbjct:   15 AHAIADKMDANDIPANLLRHDAPRLPEL------SELEVVRHFTRLSRQNFSIDTHFYPLGSCTMKYNPRAANRLASLPGYLKRHPLSPAPQSQAFLQCLYELQTMLTEITGMEKISLTSMAGAQGEFAGVAMIKAYHESRGDYDRTEMIVPDAAHGTNPASAAMCGFTVKEISTTKDGDIDLEKLRQMAGA---KTAGIMLTNPSTLGVFERQISEVAKIIHNAGGLLYYDGANLNA 243          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_COXB1 (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Coxiella burnetii (strain CbuK_Q154) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.426e-42
Identity = 95/238 (39.92%), Postives = 144/238 (60.50%), Query Frame = 2
Query:   44 AASLAEEVETA-IPSGLTR-ESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            A ++A++++   IP+ L R ++P L +       +E E++R+   L ++  S+     PLGSCTMK N        + P +   HP +PA Q+Q + +    L   L  ITG +  SL   AGA GE+AG+ +I+AYH++RGD+ R   I+P +AHGTNPA+AAMCG  +  + T   G+I++E+LR+   A     + +M+T PST GV+E  I E+ KIIH+ GG +Y DGAN+NA
Sbjct:   15 AHAIADKMDANDIPANLLRHDAPRLPEL------SELEVVRHFTRLSTQNFSIDTHFYPLGSCTMKYNPRAANRLASLPGYLKRHPLSPAPQSQAFLQCLYELQTMLTEITGMEKISLTSMAGAQGEFAGVAMIKAYHESRGDYDRTEMIVPDAAHGTNPASAAMCGFTVKEISTTKDGDIDLEKLRQMVGA---KTAGIMLTNPSTLGVFERQISEVAKIIHNAGGLLYYDGANLNA 243          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_BACAH (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Bacillus thuringiensis (strain Al Hakam) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.426e-42
Identity = 85/204 (41.67%), Postives = 130/204 (63.73%), Query Frame = 2
Query:  140 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            +E +++R+   L ++   +     PLGSCTMK N         +  FANIHP    +  QG  E+  +L E L  ITG D+ +LQP AGA GE+ GLM+IRAYH+A GD +R   I+P SAHGTNPA+A + G + ++V ++  G +++E+L++      +  + LM+T P+T G++EE I E+ +I+H+ GG++Y DGAN+NA
Sbjct:   52 SELDIMRHYTALSNRNHGVDSGFYPLGSCTMKYNPKINESVARFAGFANIHPLQDEETVQGAMELMYDLQEHLIEITGMDTVTLQPAAGAHGEWTGLMLIRAYHEANGDFNRTKVIVPDSAHGTNPASATVAGFETITVKSNEHGLVDLEDLKRVV---NEETAALMLTNPNTLGLFEENILEMAEIVHNAGGKLYYDGANLNA 252          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_LISMO (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Listeria monocytogenes GN=gcvPB PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.475e-42
Identity = 88/204 (43.14%), Postives = 128/204 (62.75%), Query Frame = 2
Query:  140 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            +E E++R+   L +    +     PLGSCTMK N         +P FANIHP  P    QG  E+  +L   L  ITG D  +LQP AGA GE+ GLM+IRA+H+  GD  R   IIP SAHGTNPA+AA+ G  +V+V ++ KG +++ +L+K      ++ + LM+T P+T G++E+ I E+ +I+H+ GG++Y DGAN+NA
Sbjct:   53 SELEIMRHYTNLSNHNFGVDSGFYPLGSCTMKYNPKINEKVARFPGFANIHPNQPESSVQGALELLYDLQTSLVEITGMDEVTLQPAAGAHGEWTGLMLIRAFHEKNGDTKRTKVIIPDSAHGTNPASAAVAGFDVVTVKSNEKGLVDVADLKKVV---GEDTAALMLTNPNTLGLFEKDIVEMAEIVHEAGGKLYYDGANLNA 253          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_LISMH (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.475e-42
Identity = 88/204 (43.14%), Postives = 128/204 (62.75%), Query Frame = 2
Query:  140 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            +E E++R+   L +    +     PLGSCTMK N         +P FANIHP  P    QG  E+  +L   L  ITG D  +LQP AGA GE+ GLM+IRA+H+  GD  R   IIP SAHGTNPA+AA+ G  +V+V ++ KG +++ +L+K      ++ + LM+T P+T G++E+ I E+ +I+H+ GG++Y DGAN+NA
Sbjct:   53 SELEIMRHYTNLSNHNFGVDSGFYPLGSCTMKYNPKINEKVARFPGFANIHPNQPESSVQGALELLYDLQTSLVEITGMDEVTLQPAAGAHGEWTGLMLIRAFHEKNGDTKRTKVIIPDSAHGTNPASAAVAGFDVVTVKSNEKGLVDVADLKKVV---GEDTAALMLTNPNTLGLFEKDIVEMAEIVHEAGGKLYYDGANLNA 253          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_LISMF (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=gcvPB PE=3 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 4.475e-42
Identity = 88/204 (43.14%), Postives = 128/204 (62.75%), Query Frame = 2
Query:  140 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            +E E++R+   L +    +     PLGSCTMK N         +P FANIHP  P    QG  E+  +L   L  ITG D  +LQP AGA GE+ GLM+IRA+H+  GD  R   IIP SAHGTNPA+AA+ G  +V+V ++ KG +++ +L+K      ++ + LM+T P+T G++E+ I E+ +I+H+ GG++Y DGAN+NA
Sbjct:   53 SELEIMRHYTNLSNHNFGVDSGFYPLGSCTMKYNPKINEKVARFPGFANIHPNQPESSVQGALELLYDLQTSLVEITGMDEVTLQPAAGAHGEWTGLMLIRAFHEKNGDTKRTKVIIPDSAHGTNPASAAVAGFDVVTVKSNEKGLVDVADLKKVV---GEDTAALMLTNPNTLGLFEKDIVEMAEIVHEAGGKLYYDGANLNA 253          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_LISMC (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.475e-42
Identity = 88/204 (43.14%), Postives = 128/204 (62.75%), Query Frame = 2
Query:  140 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            +E E++R+   L +    +     PLGSCTMK N         +P FANIHP  P    QG  E+  +L   L  ITG D  +LQP AGA GE+ GLM+IRA+H+  GD  R   IIP SAHGTNPA+AA+ G  +V+V ++ KG +++ +L+K      ++ + LM+T P+T G++E+ I E+ +I+H+ GG++Y DGAN+NA
Sbjct:   53 SELEIMRHYTNLSNHNFGVDSGFYPLGSCTMKYNPKINEKVARFPGFANIHPNQPESSVQGALELLYDLQTSLVEITGMDEVTLQPAAGAHGEWTGLMLIRAFHEKNGDTKRTKVIIPDSAHGTNPASAAVAGFDVVTVKSNEKGLVDVADLKKVV---GEDTAALMLTNPNTLGLFEKDIVEMAEIVHEAGGKLYYDGANLNA 253          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_STAAE (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Staphylococcus aureus (strain Newman) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.844e-42
Identity = 86/203 (42.36%), Postives = 127/203 (62.56%), Query Frame = 2
Query:  143 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            E +L+R+   L +K   + +   PLGSCTMK N          P F+  HP    DQ QG  E+  +L E L  ITG D  +LQP AGA GE+  LM+ +AYH+  G+ HR+  I+P SAHGTNPA+A+  G K V+V ++ +G +NI++L++      +N + +M+T P+T G++E+ I EI +I+H+ GG +Y DGAN+NA
Sbjct:   53 ELDLVRHYTELSNKNFGVDNGFYPLGSCTMKYNPKINEKVARIPGFSESHPLQDEDQVQGSLEIIYSLQEELKEITGMDEVTLQPAAGAHGEWTALMIFKAYHENNGEGHRDEVIVPDSAHGTNPASASFAGFKSVTVKSNERGEVNIDDLKRVV---NENTAAIMLTNPNTLGIFEKNIMEIREIVHNAGGLLYYDGANLNA 252          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_STAAC (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Staphylococcus aureus (strain COL) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.844e-42
Identity = 86/203 (42.36%), Postives = 127/203 (62.56%), Query Frame = 2
Query:  143 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            E +L+R+   L +K   + +   PLGSCTMK N          P F+  HP    DQ QG  E+  +L E L  ITG D  +LQP AGA GE+  LM+ +AYH+  G+ HR+  I+P SAHGTNPA+A+  G K V+V ++ +G +NI++L++      +N + +M+T P+T G++E+ I EI +I+H+ GG +Y DGAN+NA
Sbjct:   53 ELDLVRHYTELSNKNFGVDNGFYPLGSCTMKYNPKINEKVARIPGFSESHPLQDEDQVQGSLEIIYSLQEELKEITGMDEVTLQPAAGAHGEWTALMIFKAYHENNGEGHRDEVIVPDSAHGTNPASASFAGFKSVTVKSNERGEVNIDDLKRVV---NENTAAIMLTNPNTLGIFEKNIMEIREIVHNAGGLLYYDGANLNA 252          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_BACCR (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.844e-42
Identity = 85/204 (41.67%), Postives = 129/204 (63.24%), Query Frame = 2
Query:  140 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            +E +++R+   L ++   +     PLGSCTMK N         +  FANIHP       QG  E+  +L E L  ITG D+ +LQP AGA GE+ GLM+IRAYH+A GD +R   I+P SAHGTNPA+A + G + ++V ++  G +++E+L++      +  + LM+T P+T G++EE I E+ +I+H+ GG++Y DGAN+NA
Sbjct:   52 SELDIMRHYTALSNRNHGVDSGFYPLGSCTMKYNPKINESVARFAGFANIHPLQDEKTVQGAMELMYDLQEHLIEITGMDTVTLQPAAGAHGEWTGLMLIRAYHEANGDFNRTKVIVPDSAHGTNPASATVAGFETITVKSNENGLVDLEDLKRVV---NEETAALMLTNPNTLGLFEENILEMAEIVHNAGGKLYYDGANLNA 252          
The following BLAST results are available for this feature:
BLAST of EY659350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
GCSPB_COXB22.009e-4240.34Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_COXB13.426e-4239.92Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_BACAH3.426e-4241.67Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_LISMO4.475e-4243.14Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_LISMH4.475e-4243.14Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_LISMF4.475e-4243.14Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_LISMC4.475e-4243.14Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_STAAE5.844e-4242.36Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_STAAC5.844e-4242.36Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_BACCR5.844e-4241.67Probable glycine dehydrogenase [decarboxylating] s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-B11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659350 ID=EY659350; Name=EY659350; organism=Citrus sinensis; type=EST; length=862bp
AGCTTTTCTACTTTTCGCCGGGGGCAAATCAGTTCCATTCACTGCTGCAT
CTCTGGCTGAAGAGGTTGAGACTGCAATTCCGTCTGGATTAACAAGGGAG
AGTCCGTATCTGACAGATCCTGTTTTTAACAAATACCACACAGAGCATGA
ATTGCTTAGATACATTCATCTGTTACAATCAAAGGAGCTCTCACTATGCC
ATAGTATGATTCCATTGGGATCTTGTACAATGAAATTGAATGCAACAACT
GAAATGATGCCAGTGACATGGCCTAGCTTTGCTAACATACACCCTTTTGC
CCCTGCTGACCAGGCTCAGGGTTATCAGGAAATGTTTAACAATCTGGGTG
AGTGGCTGTGTACCATTACTGGCTTTGACTCTTTCTCTTTGCAACCAAAT
GCTGGTGCAGCTGGTGAGTATGCTGGGCTCATGGTTATCCGCGCTTATCA
TAAGGCAAGAGGAGACCATCACCGCAATGTGTGCATTATACCCGTGTCAG
CCCATGGGACAAATCCTGCTACTGCTGCCATGTGTGGAATGAAGATTGTT
TCTGTTGGAACTGATGCCAAGGGTAACATCAACATTGAAGAGTTAAGGAA
GGCCGCAGAAGCTAATAGGGACAACCTATCAACCCTTATGGTAACGTACC
CTTCAACTCATGGAGTTTATGAAGAAGGTATTGATGAGATATGCAAGATA
ATTCACGATAATGGAGGTCAAGTATATATGGACGGGGCTAACATGAATGC
TCANGGTCGTCTGACAGCCCTGGNTACATTGGAGCTGATGTTTGCATCTC
ATCTCCACAACATTTGCATTCGCATGGAGTGGNTGTCCCTGTATGGGCCT
ATTGTGTGAAGA
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