EY659350
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_CAUCR (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Caulobacter crescentus GN=gcvPB PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 1.032e-38 Identity = 89/231 (38.53%), Postives = 126/231 (54.55%), Query Frame = 2 Query: 71 TAIPS----GLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751 TA PS GL R++P + +E E +R+ L K ++ ++ PLGSCTMK N P F++IHP P QG E+ + L WL T+TG + +L P AGA GE GL+ IRA H+A G+ HR + P SAHGTNPATAA G +V + G +++ +L D+++ +MVT P+T G++E + EI ++ H G Y DGAN NA Sbjct: 53 TAAPSSDLNGLLRDAPIGLPGL-----SEPETVRHYVRLSQKNHAIDLALYPLGSCTMKHNPRLNEKMARLPGFSDIHPLQPQSTVQGALELMDRLAHWLKTLTGMPAVALTPKAGAHGELCGLLAIRAAHEAAGNGHRKTVLAPTSAHGTNPATAAFVGYTVVEIAQTEDGRVDLADLESKL---GDHVAAIMVTNPNTCGLFERDVVEIARLTHAAGAYFYCDGANFNA 275
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_THEP1 (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=gcvPB PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.347e-38 Identity = 85/228 (37.28%), Postives = 133/228 (58.33%), Query Frame = 2 Query: 68 ETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751 E ++P+ R +P V +E +++R+ L K S+ + PLGSCTMK N F IHP+ PA+ QG + L E LC ITG D +LQP AGA GE G++++R Y K+RGD R ++P SAHGTNPA+A+M G ++V + G +++E+L+K + + ++ +M+T P+T G++E+ I +I ++ H+ G +Y DGAN+NA Sbjct: 23 EYSLPNRFLRRTPPELPEV-----SEPDVVRHYTDLARKNYSVDRGIYPLGSCTMKYNPKLNEKVANLEGFREIHPYQPAETVQGSLRLMYELKEMLCEITGMDDMTLQPAAGAHGELTGMLIVREYFKSRGDTGRKKVLVPDSAHGTNPASASMVGFEVVEI-KSKNGMVDVEDLKKLLD---EEVAAVMLTNPNTLGLFEKDILKIAEMTHECGALLYYDGANLNA 241
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_FRATN (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Francisella tularensis subsp. novicida (strain U112) GN=gcvPB PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.347e-38 Identity = 92/243 (37.86%), Postives = 129/243 (53.09%), Query Frame = 2 Query: 23 GKSVPFTAASLAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751 GK+ P S +V L + P L + E +++R+ L K + + PLGSCTMK N + F HP+A A QG E +L + +TG SL P AGA GE+AG+ +I+AYH RGD R+ I+P +AHGTNPATA +CG+K++ + T G+I+IE L K + +M+T PST GV+E I I K +H+ GG +Y DGAN+NA Sbjct: 9 GKNSPSVMPSKKGDVSNIPTDMLRTKKPILPE------QAELDVVRHYTQLSRKNFCIDTNFYPLGSCTMKYNPRAAHKYASLAGFLERHPYASAQSIQGTLECLYDLQNLIKELTGMTGVSLAPMAGAQGEFAGVAMIKAYHHKRGDFERDEIIVPDAAHGTNPATAKVCGLKVIEIPTKKDGDIDIEALDKVL---GPKTAGIMLTNPSTVGVFERNIAVIAKKVHEAGGLLYYDGANLNA 242
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_CHLT3 (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=gcvPB PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.347e-38 Identity = 88/231 (38.10%), Postives = 136/231 (58.87%), Query Frame = 2 Query: 59 EEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751 +EV IP+ R++ V E+E++R+ L + + M PLGSCTMK N + P F+ +HP P + QG ++ L EWL I G + SLQP AGA GE G+++IR YH+ +G + + ++P SAHGTNPA++A+ G V V T+A+G ++++LR + ++++ LM+T P+T G++E I EI +++H NG +YMDGANMNA Sbjct: 27 QEVSELIPAQFLRKAKADLPEV-----QENEVVRHFVKLSTLNHHVDKGMYPLGSCTMKYNPKVNEVTSALPGFSALHPLQPQESVQGALKLMYELQEWLKEICGMKAVSLQPVAGAHGELTGILLIRKYHEKQGKPRKKI-LVPDSAHGTNPASSAIAGYMTVGVKTNARGLTDMDDLRAKLD---EDVAALMLTNPNTLGIFESQILEISELLHANGSLLYMDGANMNA 248
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_THEM4 (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=gcvPB PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 2.298e-38 Identity = 81/204 (39.71%), Postives = 123/204 (60.29%), Query Frame = 2 Query: 140 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751 +E +++R+ L +K ++ PLGSCTMK N + F IHP P + QG ++ L E LC I+G D +L P+AGA GE G+++ RAYH +RGD R I+P SAHGTNPA+A M G ++V + + G I++EEL K + D ++ L++T P+T G++E+ I +I + +H +G +Y DGAN+NA Sbjct: 44 SELDIVRHYTNLAAKNYAVDVGFYPLGSCTMKYNPKINEKLASLEGFTMIHPCQPREVTQGALQLMYELKEMLCEISGMDDMTLIPSAGAHGELTGMLIARAYHLSRGDTKRKKAIVPDSAHGTNPASAMMAGFEVVELKSGKDGRIDLEELEKHLD---DEVAVLLLTNPNTLGLFEKDIIKIAETVHKHGALLYYDGANLNA 244
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_NITOC (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=gcvPB PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.920e-38 Identity = 85/225 (37.78%), Postives = 125/225 (55.56%), Query Frame = 2 Query: 77 IPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751 +P R+ P V +E +++R+ L K S+ PLGSCTMK N + P F HP P +QG+ L + L +TG + SL P AGA GE+ G+ +IRAYH+ARGD R ++P +AHGTNPATA MCG ++ + T+ +G++++E L KA + +M+T PST G+++ I I + +H GG +Y DGAN+NA Sbjct: 27 LPERFLRQQPPALPEV-----SEMDVVRHYTGLSQKNFSIDTHFYPLGSCTMKYNPRACHTLASLPGFLERHPATPEAMSQGFLACLYELQDILAKMTGMQTMSLAPMAGAQGEFTGVAMIRAYHEARGDKERCEMLVPDAAHGTNPATATMCGFRVREIPTNPEGDVDLEALHKAL---GPQTAGIMLTNPSTLGIFDRNIQVIAQSVHKAGGLLYYDGANLNA 243
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_FRATW (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=gcvPB PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 5.120e-38 Identity = 91/243 (37.45%), Postives = 128/243 (52.67%), Query Frame = 2 Query: 23 GKSVPFTAASLAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751 GK+ P S +V L + P L + E +++R+ L K + + PLGSCTMK N + F HP+A A QG E +L + +TG SL P AGA GE+AG+ +I+AYH R D R+ I+P +AHGTNPATA +CG+K++ + T G+I+IE L K + +M+T PST GV+E I I K +H+ GG +Y DGAN+NA Sbjct: 9 GKNSPSVMPSKKGDVSNIPTDMLRTKKPILPE------QAELDVVRHYTQLSRKNFCIDTNFYPLGSCTMKYNPRAAHKYASLAGFLERHPYASAQSVQGTLECLYDLQNLIKELTGMTGVSLAPMAGAQGEFAGVAMIKAYHHKRSDFERDEIIVPDAAHGTNPATAKVCGLKVIEIPTKKDGDIDIEALDKVL---GPKTAGIMLTNPSTVGVFERNIAVIAKKVHEAGGLLYYDGANLNA 242
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_FRATM (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=gcvPB PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 5.120e-38 Identity = 91/243 (37.45%), Postives = 128/243 (52.67%), Query Frame = 2 Query: 23 GKSVPFTAASLAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751 GK+ P S +V L + P L + E +++R+ L K + + PLGSCTMK N + F HP+A A QG E +L + +TG SL P AGA GE+AG+ +I+AYH R D R+ I+P +AHGTNPATA +CG+K++ + T G+I+IE L K + +M+T PST GV+E I I K +H+ GG +Y DGAN+NA Sbjct: 9 GKNSPSVMPSKKGDVSNIPTDMLRTKKPILPE------QAELDVVRHYTQLSRKNFCIDTNFYPLGSCTMKYNPRAAHKYASLAGFLERHPYASAQSVQGTLECLYDLQNLIKELTGMTGVSLAPMAGAQGEFAGVAMIKAYHHKRSDFERDEIIVPDAAHGTNPATAKVCGLKVIEIPTKKDGDIDIEALDKVL---GPKTAGIMLTNPSTVGVFERNIAVIAKKVHEAGGLLYYDGANLNA 242
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_AERPE (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Aeropyrum pernix GN=gcvPB PE=3 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 5.120e-38 Identity = 89/225 (39.56%), Postives = 129/225 (57.33%), Query Frame = 2 Query: 77 IPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGD-HHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMN 748 +P L R SP V +E E++R+ L + + +PLGSCTMK N P +HP + QG E + EWL ITG D+ ++ P AG+ GE AG+++I+ +H+ RGD R V I+P SAHGTNPA+AAM G ++V V T GN+++E L+ A + + LM+T PST G++EE I EI +++H+ GG +Y DGAN+N Sbjct: 41 LPQSLARGSPPSLPEV-----SEVEVVRHYTRLSQMAYGVDNGPVPLGSCTMKYNPRVAARLAFDPRLETLHPLQDDETVQGVLEAIYMVQEWLRHITGMDACTVHPAAGSQGELAGVLMIKRFHEMRGDLDKRRVIIVPDSAHGTNPASAAMGGFQVVEVPTGDDGNVDMEALKAAVGG---DTAGLMITNPSTLGLFEENILEISRLVHEAGGLLYYDGANLN 257
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_THESQ (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Thermotoga sp. (strain RQ2) GN=gcvPB PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 6.686e-38 Identity = 85/228 (37.28%), Postives = 130/228 (57.02%), Query Frame = 2 Query: 68 ETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751 E ++P R +P V +E +++R+ L K S+ + PLGSCTMK N F IHP+ P + QG + L E LC ITG D +LQP AGA GE G++++R Y K RGD R ++P SAHGTNPA+A+M G ++V + G +++E+LRK + + ++ +M+T P+T G++E+ I +I ++ H+ G +Y DGAN+NA Sbjct: 23 EYSLPDRFLRSTPPKLPEV-----SEPDVVRHYTDLARKNYSVDLGIYPLGSCTMKYNPKLNEKAANLEGFREIHPYQPVETVQGSLRLMYELKEMLCEITGMDDMTLQPAAGAHGELTGMLIVREYFKNRGDTGRKKVLVPDSAHGTNPASASMVGFEVVEI-KSKNGMVDVEDLRKLLD---EEVAAVMLTNPNTLGLFEKDILKIAEMTHECGALLYYDGANLNA 241 The following BLAST results are available for this feature:
BLAST of EY659350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 368
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659350 ID=EY659350; Name=EY659350; organism=Citrus sinensis; type=EST; length=862bpback to top |