EY659349

Overview
NameEY659349
Unique NameEY659349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACTM_STRPU (Actin, muscle OS=Strongylocentrotus purpuratus PE=3 SV=1)

HSP 1 Score: 377.867 bits (969), Expect = 4.303e-104
Identity = 184/220 (83.64%), Postives = 204/220 (92.73%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+HTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIVRD+KEKL Y AL++E+E+ TA +SSS+EK+YELPDGQ+ITIG ERFRCPE LF+P+ IGME+AGIHETTYNSIMKCD+DIRKDLY N VLSGG++M+PGIADRM KEITALAPSS+KIK++APPERKYSVWIGGSILASLSTFQQMWISK EY  SG SIVHRKCF
Sbjct:  157 GDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYTALNFEREMATAAASSSLEKSYELPDGQVITIGNERFRCPETLFEPAFIGMESAGIHETTYNSIMKCDIDIRKDLYANTVLSGGTSMYPGIADRMQKEITALAPSSVKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY--SGASIVHRKCF 374          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT8_SOLTU (Actin-79 (Fragment) OS=Solanum tuberosum PE=3 SV=1)

HSP 1 Score: 377.481 bits (968), Expect = 5.620e-104
Identity = 187/199 (93.97%), Postives = 196/199 (98.49%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 608
            GDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIVRD+KEKL+Y+ALDYEQE+ETAK+SSSVEK+YELPDGQ+I IGAERFRCPEVLFQPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ
Sbjct:  138 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDVKEKLSYIALDYEQEIETAKTSSSVEKSYELPDGQVIPIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 336          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT1_PHYIN (Actin-1 OS=Phytophthora infestans GN=ACTA PE=2 SV=1)

HSP 1 Score: 377.481 bits (968), Expect = 5.620e-104
Identity = 182/220 (82.73%), Postives = 203/220 (92.27%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGVSHTVPIYEGYALPHAI+RLDLAGRDLTD +MKILTERGY FTTTAEREIVRD+KEKL Y+ALD++QE++TA  SS +EK+YELPDG +I IG ERFR PEVLFQPSLIG EA+GIHE T+ +IMKCDVDIRKDLY NIVLSGG+TM+PGI +RM+KE+TALAPS+MKIKVVAPPERKYSVWIGGSI +SLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  157 GDGVSHTVPIYEGYALPHAIVRLDLAGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLTYIALDFDQEMKTAAESSGLEKSYELPDGNVIVIGNERFRTPEVLFQPSLIGKEASGIHECTFQTIMKCDVDIRKDLYCNIVLSGGTTMYPGIGERMTKELTALAPSTMKIKVVAPPERKYSVWIGGSIQSSLSTFQQMWISKAEYDESGPSIVHRKCF 376          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT_THELA (Actin OS=Thermomyces lanuginosus PE=3 SV=1)

HSP 1 Score: 377.096 bits (967), Expect = 7.341e-104
Identity = 178/220 (80.91%), Postives = 203/220 (92.27%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+HTVPIYEG+AL HAI R+D+AGRDLTD LMKIL ERGY FTTTAEREIVRD+KEKL YVA D+EQEL+TA  SS++EK+YELPDGQ+ITIG ERFR PE LF P+++G E+ GIHETT+NSI+KCDVD+RKDLYGNIV+SGG+TM+PGIADRM KE+TALAPSSMKIK++APPERKYSVWIGGSILASLSTFQQMW+SK EYDESGPSIVHRKCF
Sbjct:  156 GDGVTHTVPIYEGFALTHAISRIDIAGRDLTDYLMKILAERGYSFTTTAEREIVRDIKEKLCYVAFDFEQELQTAAQSSTLEKSYELPDGQVITIGNERFRAPEALFNPAVLGHESGGIHETTFNSIIKCDVDVRKDLYGNIVMSGGTTMYPGIADRMQKELTALAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWVSKQEYDESGPSIVHRKCF 375          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT_ASHGO (Actin OS=Ashbya gossypii GN=ACT1 PE=2 SV=1)

HSP 1 Score: 377.096 bits (967), Expect = 7.341e-104
Identity = 177/220 (80.45%), Postives = 205/220 (93.18%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+H VPIY G++LPHAILR+DLAGRD+TD LMKIL+ERGY F+TTAEREIVRD+KEKL YVALD+EQE++TA  SS++EK+YELPDGQ+ITIG ERFR PE LF PS++G+EAAGI +TTYNSIMKCDVD+RK+LYGNIV+SGG+TMFPGIA+RM KEITALAPSSMK+K++APPERKYSVWIGGSILASL+TFQQMWISK EYDESGPSIVH KCF
Sbjct:  157 GDGVTHVVPIYAGFSLPHAILRIDLAGRDMTDYLMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTAAQSSAIEKSYELPDGQVITIGNERFRAPEALFHPSVLGLEAAGIDQTTYNSIMKCDVDVRKELYGNIVMSGGTTMFPGIAERMQKEITALAPSSMKVKIIAPPERKYSVWIGGSILASLTTFQQMWISKQEYDESGPSIVHHKCF 376          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT_ACHBI (Actin OS=Achlya bisexualis PE=3 SV=1)

HSP 1 Score: 377.096 bits (967), Expect = 7.341e-104
Identity = 180/220 (81.82%), Postives = 205/220 (93.18%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGVSHTVPIYEGYALPHAI+RLDLAGRDLTD +MKILTERGY FTTTAEREIVRD+KEKL Y+ALD++QE++TA  SS +EK+YELPDG ++ IG ERFR PEVLFQP+LIG EA+GIH+ T+ +IMKCDVDIRKDLY NIVLSGG+TM+PGI++RM+KE+TALAPS+MKIKVVAPPERKYSVWIGGSIL+SLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  157 GDGVSHTVPIYEGYALPHAIVRLDLAGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLTYIALDFDQEMKTAAESSGLEKSYELPDGNVLVIGNERFRTPEVLFQPALIGKEASGIHDCTFQTIMKCDVDIRKDLYCNIVLSGGTTMYPGISERMTKELTALAPSTMKIKVVAPPERKYSVWIGGSILSSLSTFQQMWISKAEYDESGPSIVHRKCF 376          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT1_NAEFO (Actin-1 OS=Naegleria fowleri PE=2 SV=2)

HSP 1 Score: 376.711 bits (966), Expect = 9.587e-104
Identity = 180/220 (81.82%), Postives = 203/220 (92.27%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKIL ERGY F TTAEREIVRD+KEKL Y+ALD+EQE++ A  SSSVEK+YELPDG +IT+G ERFRCPEVLFQP+ IGMEAAG+HETT+NSI KCD+DIRKDLYGN+VLSGG+TMF GIA+RM+KE+T +AP+SMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EY+++GP IVHRK F
Sbjct:  156 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILMERGYSFNTTAEREIVRDIKEKLCYIALDFEQEMKIAAESSSVEKSYELPDGNVITVGNERFRCPEVLFQPNFIGMEAAGVHETTFNSIGKCDIDIRKDLYGNVVLSGGTTMFEGIAERMTKELTNMAPASMKIKVVAPPERKYSVWIGGSILASLSTFQQMWITKEEYEDAGPGIVHRKSF 375          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT7_TOBAC (Actin-104 (Fragment) OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 376.326 bits (965), Expect = 1.252e-103
Identity = 190/199 (95.48%), Postives = 195/199 (97.99%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 608
            GDGVSHTVPIYEGYALPHAILRLDLAGR LTD LMKILTERGYMFTT+AEREIVRD+KEKLAYVALD+EQELETAKSSSSVEK+YELPDGQ+ITIGAERFRCPEVLFQPS IGMEAAGIHETTYNSIMK DVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ
Sbjct:  138 GDGVSHTVPIYEGYALPHAILRLDLAGRGLTDYLMKILTERGYMFTTSAEREIVRDVKEKLAYVALDFEQELETAKSSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKSDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 336          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT3_SOLLC (Actin-52 (Fragment) OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 375.941 bits (964), Expect = 1.635e-103
Identity = 186/199 (93.47%), Postives = 196/199 (98.49%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 608
            GDGVSHTVPIYEGYALPHAI RLDLAGRDLTD LMKILTERGY FTTTAEREIVRD+KEKL+Y+ALDYEQE+ETAK+SSSVEK+YELPDGQ+ITIG+ERFRCPEVLFQPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ
Sbjct:  138 GDGVSHTVPIYEGYALPHAIPRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDVKEKLSYIALDYEQEIETAKTSSSVEKSYELPDGQVITIGSERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 336          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT1_SOLLC (Actin-41 (Fragment) OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 375.555 bits (963), Expect = 2.136e-103
Identity = 185/199 (92.96%), Postives = 197/199 (98.99%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 608
            GDG+SHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGY FTT+AEREIVRD+KEKLAY+ALDYEQELET+K+SSSVEK+YELPDGQ+I IG+ERFRCPEVLFQPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ
Sbjct:  138 GDGLSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYSFTTSAEREIVRDVKEKLAYIALDYEQELETSKTSSSVEKSYELPDGQVIPIGSERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 336          
The following BLAST results are available for this feature:
BLAST of EY659349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 486
Match NameE-valueIdentityDescription
ACTM_STRPU4.303e-10483.64Actin, muscle OS=Strongylocentrotus purpuratus PE=... [more]
ACT8_SOLTU5.620e-10493.97Actin-79 (Fragment) OS=Solanum tuberosum PE=3 SV=1[more]
ACT1_PHYIN5.620e-10482.73Actin-1 OS=Phytophthora infestans GN=ACTA PE=2 SV=... [more]
ACT_THELA7.341e-10480.91Actin OS=Thermomyces lanuginosus PE=3 SV=1[more]
ACT_ASHGO7.341e-10480.45Actin OS=Ashbya gossypii GN=ACT1 PE=2 SV=1[more]
ACT_ACHBI7.341e-10481.82Actin OS=Achlya bisexualis PE=3 SV=1[more]
ACT1_NAEFO9.587e-10481.82Actin-1 OS=Naegleria fowleri PE=2 SV=2[more]
ACT7_TOBAC1.252e-10395.48Actin-104 (Fragment) OS=Nicotiana tabacum PE=3 SV=... [more]
ACT3_SOLLC1.635e-10393.47Actin-52 (Fragment) OS=Solanum lycopersicum PE=3 S... [more]
ACT1_SOLLC2.136e-10392.96Actin-41 (Fragment) OS=Solanum lycopersicum PE=3 S... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659349 ID=EY659349; Name=EY659349; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGGGTGATGGTGTCTCTCATACTGTACCAATCTATGAGGGA
TATGCCCTTCCTCATGCCATTCTTCGTTTGGACTTGGCTGGTCGTGATCT
CACTGATGCATTGATGAAGATTCTTACTGAGAGAGGTTACATGTTTACCA
CCACAGCCGAACGGGAAATTGTCCGTGACATGAAGGAGAAGCTTGCTTAT
GTTGCCCTAGACTATGAGCAAGAACTTGAGACTGCCAAGAGCAGCTCATC
TGTTGAGAAGAACTATGAGCTGCCTGATGGCCAGATCATCACCATTGGAG
CTGAAAGATTCCGTTGCCCAGAAGTTCTGTTCCAGCCATCTCTCATCGGA
ATGGAAGCTGCTGGTATTCATGAGACTACCTACAACTCCATCATGAAGTG
TGATGTGGATATTAGAAAGGATCTGTATGGTAACATTGTTCTCAGTGGGG
GTTCAACTATGTTCCCTGGTATTGCCGACCGTATGAGCAAGGAAATCACA
GCACTTGCTCCAAGCAGCATGAAGATCAAGGTCGTGGCTCCACCAGAGAG
AAAATACAGTGTTTGGATTGGAGGATCAATCCTTGCATCCCTCAGCACCT
TCCAGCAGATGTGGATCTCAAAGGGCGAGTATGATGAGTCTGGTCCATCC
ATTGTCCACAGGAAATGCTTCTAAGTTCTTTAAGTGCTTGATGGGTGAGT
TCTTTTTTTCCATTTAGTTGGTTTTTTGTGTCTCGTTTCGCGAACTCAAG
TTGGTTGACATGGAGAAGTGCTAAGGATGGGGCCATTGAANGAGGCATAT
CTCGATATTTGATGTATTATACAGCTTCTTACAGCGTTTGAGGGGGGCTT
TATTCTGTACTCACCATCTTCCNTTGCTTGCATTCATCT
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