EY659349

Overview
NameEY659349
Unique NameEY659349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: POTEE_HUMAN (POTE ankyrin domain family member E OS=Homo sapiens GN=POTEE PE=1 SV=3)

HSP 1 Score: 369.392 bits (947), Expect = 1.531e-101
Identity = 179/220 (81.36%), Postives = 198/220 (90.00%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+HTVPIYEG ALPHA LRLDLAGR+L D LMKILTERGY FTT AEREIVRD+KEKL YVALD+EQE+ TA SSSS+EK+YELPDGQ+ITIG ERFRCPE LFQP  +GME+ GIHETT+NSIMK DVDIRKDLY N VLSGG+TM+PG+A RM KEI ALAPS MKI+++APP+RKYSVW+GGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  856 GDGVTHTVPIYEGNALPHATLRLDLAGRELPDYLMKILTERGYRFTTMAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPCFLGMESCGIHETTFNSIMKSDVDIRKDLYTNTVLSGGTTMYPGMAHRMQKEIAALAPSMMKIRIIAPPKRKYSVWVGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 1075          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT_PROCL (Actin (Fragment) OS=Procambarus clarkii PE=1 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 1.999e-101
Identity = 170/220 (77.27%), Postives = 202/220 (91.82%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGVSH VP+YEG+ALPHAILRLDLAGRDLT+ LMKI+TERGY FTTTAEREIVRD+KEKL Y+ALD+E E+  + +SSS++K+YELPDGQ+ITIG ERFRCPE LFQPS +GME+ G+HET ++SIM+CD+DIRKDL+ NIV+SGG+TM+PGIADR+ KEITALAP+++KIK++APPERKYSVWIGGSILASLSTFQ MWI+K EYDESGP IVHRKCF
Sbjct:  103 GDGVSHMVPVYEGFALPHAILRLDLAGRDLTNYLMKIMTERGYSFTTTAEREIVRDIKEKLCYIALDFENEMNVSAASSSIDKSYELPDGQVITIGNERFRCPEALFQPSFLGMESVGVHETVHSSIMRCDIDIRKDLFANIVVSGGTTMYPGIADRLQKEITALAPATIKIKIIAPPERKYSVWIGGSILASLSTFQTMWITKEEYDESGPGIVHRKCF 322          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT_PICPG (Actin OS=Pichia pastoris (strain GS115) GN=ACT1 PE=3 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 1.999e-101
Identity = 174/220 (79.09%), Postives = 202/220 (91.82%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+H VPIY G++LPHAILR+DLAGRDLTD LMKIL+ERGY F+T+AEREIVRD+KEKL YVALD++QEL+T+  SSS+EK+YELPDGQ+ITIG ERFR PE LF PS++G+EA+GI +TTYNSIMKCDVD+RK+LY NIV+SGG+TMFPGIA+RM KE+TALAPSSMK+K+ APPERKYSVWIGGSILASL TFQQMWISK EYDESGPSIVH KCF
Sbjct:  157 GDGVTHVVPIYAGFSLPHAILRIDLAGRDLTDYLMKILSERGYTFSTSAEREIVRDIKEKLCYVALDFDQELQTSSQSSSIEKSYELPDGQVITIGNERFRAPEALFHPSVLGLEASGIDQTTYNSIMKCDVDVRKELYSNIVMSGGTTMFPGIAERMQKELTALAPSSMKVKISAPPERKYSVWIGGSILASLGTFQQMWISKQEYDESGPSIVHLKCF 376          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT_COPC7 (Actin OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=ACT1 PE=3 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 1.999e-101
Identity = 176/220 (80.00%), Postives = 200/220 (90.91%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+HTVPIYEG+ALPHAILRLDLAGRDLTD L+K L ERGY FTTTAEREIVRD+KEKL YVALD+EQE++TA  SSS+EK+YELPDGQ+ITIG ERFR PE LFQP+ +G+EAAGIHETTYNSI KCD+DIR+DLYGN+VLSGG+TMF GIADRM KE+ AL+P+SM++K+VAP ERKYSVWIGGSILASLSTFQ +W SK EYDESGP IVHRKCF
Sbjct:  156 GDGVTHTVPIYEGFALPHAILRLDLAGRDLTDYLIKCLGERGYPFTTTAEREIVRDIKEKLCYVALDFEQEMQTAAQSSSLEKSYELPDGQVITIGNERFRAPEALFQPAFLGLEAAGIHETTYNSIFKCDLDIRRDLYGNVVLSGGTTMFSGIADRMQKELLALSPASMRVKIVAPLERKYSVWIGGSILASLSTFQNLWCSKQEYDESGPGIVHRKCF 375          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT18_DICDI (Actin-18 OS=Dictyostelium discoideum GN=act18 PE=3 SV=3)

HSP 1 Score: 369.007 bits (946), Expect = 1.999e-101
Identity = 173/219 (79.00%), Postives = 206/219 (94.06%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKC 668
            GDGVSH V IYEG+ALPHAILRLDLAGRDL+D +MKILT+RGY FTTTAE+EI++D+KEKL+YVALD++ E+ TA SS+++EK+YELPDG++ITIG ERFRCPE LFQPSL+ ME+AGIHET YNSIMKCDVDIR+ L+GN++LSGGSTMFPGIADRM+KE+TALAPS+MKIK++APPERKYSVW+GGSILASLS+FQ+MWISK EY+ESGPSIVHRKC
Sbjct:  157 GDGVSHAVSIYEGHALPHAILRLDLAGRDLSDYMMKILTKRGYSFTTTAEKEIIKDIKEKLSYVALDFDAEMLTAASSTTLEKSYELPDGKVITIGNERFRCPEALFQPSLLAMESAGIHETIYNSIMKCDVDIRRYLFGNVILSGGSTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWVGGSILASLSSFQEMWISKEEYNESGPSIVHRKC 375          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACTBM_HUMAN (Beta-actin-like protein 3 OS=Homo sapiens GN=ACTBL3 PE=1 SV=1)

HSP 1 Score: 368.237 bits (944), Expect = 3.410e-101
Identity = 180/220 (81.82%), Postives = 198/220 (90.00%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDG +HTVPIYEG ALPHA LRLDLAGR+LTD LMKILTERGY FTTTAE+EIVRD+KEKL YVALD EQE+  A SSSSVEK+YELPDGQ+ITIG ERFRCPE LFQP  +GME+ GIH+TT+NSI+K DVDIRKDLY N VLSGG+TM+PGIA RM KEITALAPS MKIK++APP+RKYSVW+GGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  156 GDGFTHTVPIYEGNALPHATLRLDLAGRELTDYLMKILTERGYRFTTTAEQEIVRDIKEKLCYVALDSEQEMAMAASSSSVEKSYELPDGQVITIGNERFRCPEALFQPCFLGMESCGIHKTTFNSIVKSDVDIRKDLYTNTVLSGGTTMYPGIAHRMQKEITALAPSIMKIKIIAPPKRKYSVWVGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT_YARLI (Actin OS=Yarrowia lipolytica GN=ACT1 PE=3 SV=2)

HSP 1 Score: 367.851 bits (943), Expect = 4.453e-101
Identity = 172/220 (78.18%), Postives = 203/220 (92.27%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+H VPIY G++LPHAI+RLD+AGRDLTD LMKIL+ERGY FT +AEREIVRD+KEKL YVALD+EQEL+TA  SSS+EK+YELPDG++ITIG ERFR PE LF PS++G+EAAGIHETT+NSIMKCDVD+RKDLYGNIV+SGG+TM+PGIA+RM KEI+ALAP+S+K+K+ AP ERKYSVWIGGSILASL TFQQMWISK EYDE+GP+IVHRKC+
Sbjct:  156 GDGVTHVVPIYSGFSLPHAIMRLDMAGRDLTDYLMKILSERGYSFTNSAEREIVRDIKEKLCYVALDFEQELQTASQSSSLEKSYELPDGRVITIGNERFRAPEALFHPSMLGLEAAGIHETTFNSIMKCDVDVRKDLYGNIVMSGGTTMYPGIAERMHKEISALAPTSIKVKITAPLERKYSVWIGGSILASLGTFQQMWISKQEYDEAGPTIVHRKCY 375          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT_CYAME (Actin OS=Cyanidioschyzon merolae PE=3 SV=1)

HSP 1 Score: 367.851 bits (943), Expect = 4.453e-101
Identity = 178/221 (80.54%), Postives = 196/221 (88.69%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSS-SSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+HTVPIYEGYALPHAI+R+DLAGRDLTD L KILTERGY FTTTAEREIVRD+KEK  YVA DY+ ELE A S  + ++K YELPDGQIITIG+ERFRCPEVLFQPSLIGME  GIH   Y SIMKCDVDIRKDLY N+VLSGG+TMFPGIADRM +E+ ++APSS+KIK+VAP ERKYSVWIGGSILASLSTFQQMWISK EYDE GPS+VHRKCF
Sbjct:  157 GDGVTHTVPIYEGYALPHAIMRIDLAGRDLTDYLAKILTERGYSFTTTAEREIVRDIKEKCCYVAQDYDHELEIASSQPAKIDKQYELPDGQIITIGSERFRCPEVLFQPSLIGMEGEGIHNVAYQSIMKCDVDIRKDLYANVVLSGGTTMFPGIADRMQRELASVAPSSVKIKLVAPAERKYSVWIGGSILASLSTFQQMWISKAEYDEFGPSVVHRKCF 377          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT2_SOLTU (Actin-46 (Fragment) OS=Solanum tuberosum PE=3 SV=1)

HSP 1 Score: 367.466 bits (942), Expect = 5.816e-101
Identity = 182/199 (91.46%), Postives = 192/199 (96.48%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 608
            GDGVSHTVPIYEGYALPHAILRLDLAG DLT+ ++KILTERGY FTTTAE+EIVRDMKEKLAY+ALD+EQELET  + S+VEKNYELPDGQ+ITIGAERFRCPEVL+QPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEI ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ
Sbjct:  138 GDGVSHTVPIYEGYALPHAILRLDLAGADLTEYMVKILTERGYSFTTTAEKEIVRDMKEKLAYLALDFEQELETTTTGSAVEKNYELPDGQVITIGAERFRCPEVLYQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIQALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 336          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT1_PLAYO (Actin-1 OS=Plasmodium yoelii yoelii GN=PY02240 PE=3 SV=1)

HSP 1 Score: 367.466 bits (942), Expect = 5.816e-101
Identity = 173/220 (78.64%), Postives = 203/220 (92.27%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGVSHTVPIYEGYALPHAI+RLDLAGRDLT+ LMKIL ERGY F+T+AE+EIVRD+KEKL Y+AL++++E++T++ SS +EK+YELPDG IIT+G ERFRCPE LFQPS +G EAAGIH TT+NSI KCDVDIRKDLYGNIVLSGG+TM+ GI +R++++IT LAPS+MKIKVVAPPERKYSVWIGGSIL+SLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct:  157 GDGVSHTVPIYEGYALPHAIMRLDLAGRDLTEYLMKILHERGYGFSTSAEKEIVRDIKEKLCYIALNFDEEMKTSEQSSDIEKSYELPDGNIITVGNERFRCPEALFQPSFLGKEAAGIHTTTFNSIKKCDVDIRKDLYGNIVLSGGTTMYEGIGERLTRDITTLAPSTMKIKVVAPPERKYSVWIGGSILSSLSTFQQMWITKEEYDESGPSIVHRKCF 376          
The following BLAST results are available for this feature:
BLAST of EY659349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 486
Match NameE-valueIdentityDescription
POTEE_HUMAN1.531e-10181.36POTE ankyrin domain family member E OS=Homo sapien... [more]
ACT_PROCL1.999e-10177.27Actin (Fragment) OS=Procambarus clarkii PE=1 SV=1[more]
ACT_PICPG1.999e-10179.09Actin OS=Pichia pastoris (strain GS115) GN=ACT1 PE... [more]
ACT_COPC71.999e-10180.00Actin OS=Coprinopsis cinerea (strain Okayama-7 / 1... [more]
ACT18_DICDI1.999e-10179.00Actin-18 OS=Dictyostelium discoideum GN=act18 PE=3... [more]
ACTBM_HUMAN3.410e-10181.82Beta-actin-like protein 3 OS=Homo sapiens GN=ACTBL... [more]
ACT_YARLI4.453e-10178.18Actin OS=Yarrowia lipolytica GN=ACT1 PE=3 SV=2[more]
ACT_CYAME4.453e-10180.54Actin OS=Cyanidioschyzon merolae PE=3 SV=1[more]
ACT2_SOLTU5.816e-10191.46Actin-46 (Fragment) OS=Solanum tuberosum PE=3 SV=1[more]
ACT1_PLAYO5.816e-10178.64Actin-1 OS=Plasmodium yoelii yoelii GN=PY02240 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659349 ID=EY659349; Name=EY659349; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGGGTGATGGTGTCTCTCATACTGTACCAATCTATGAGGGA
TATGCCCTTCCTCATGCCATTCTTCGTTTGGACTTGGCTGGTCGTGATCT
CACTGATGCATTGATGAAGATTCTTACTGAGAGAGGTTACATGTTTACCA
CCACAGCCGAACGGGAAATTGTCCGTGACATGAAGGAGAAGCTTGCTTAT
GTTGCCCTAGACTATGAGCAAGAACTTGAGACTGCCAAGAGCAGCTCATC
TGTTGAGAAGAACTATGAGCTGCCTGATGGCCAGATCATCACCATTGGAG
CTGAAAGATTCCGTTGCCCAGAAGTTCTGTTCCAGCCATCTCTCATCGGA
ATGGAAGCTGCTGGTATTCATGAGACTACCTACAACTCCATCATGAAGTG
TGATGTGGATATTAGAAAGGATCTGTATGGTAACATTGTTCTCAGTGGGG
GTTCAACTATGTTCCCTGGTATTGCCGACCGTATGAGCAAGGAAATCACA
GCACTTGCTCCAAGCAGCATGAAGATCAAGGTCGTGGCTCCACCAGAGAG
AAAATACAGTGTTTGGATTGGAGGATCAATCCTTGCATCCCTCAGCACCT
TCCAGCAGATGTGGATCTCAAAGGGCGAGTATGATGAGTCTGGTCCATCC
ATTGTCCACAGGAAATGCTTCTAAGTTCTTTAAGTGCTTGATGGGTGAGT
TCTTTTTTTCCATTTAGTTGGTTTTTTGTGTCTCGTTTCGCGAACTCAAG
TTGGTTGACATGGAGAAGTGCTAAGGATGGGGCCATTGAANGAGGCATAT
CTCGATATTTGATGTATTATACAGCTTCTTACAGCGTTTGAGGGGGGCTT
TATTCTGTACTCACCATCTTCCNTTGCTTGCATTCATCT
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