EY659349

Overview
NameEY659349
Unique NameEY659349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7281 contig Csv1_Contig7281:583..1472. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACTM_MOLOC (Actin, larval muscle-type OS=Molgula oculata PE=3 SV=1)

HSP 1 Score: 383.259 bits (983), Expect = 1.024e-105
Identity = 182/220 (82.73%), Postives = 203/220 (92.27%), Query Frame = 3 
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDG+SH VPIYEGYALPHAI R+DLAGRDLT+ L KILTERGY F TTAE+EIVRD+KEKL YVALD+EQE+ TA SS+S+EK+YELPDGQ+ITIG ERFRCPE LFQPS IGME+AGIHETTYNSIMKCD+DIRKDLY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSIL+SLSTF QMWI+K EYDE+GPSIVHRKCF
Sbjct:  159 GDGISHNVPIYEGYALPHAIARMDLAGRDLTEYLTKILTERGYSFVTTAEKEIVRDIKEKLCYVALDFEQEMATAASSTSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILSSLSTFNQMWITKAEYDEAGPSIVHRKCF 378
[Close]
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACTG_EMENI (Actin, gamma OS=Emericella nidulans GN=acnA PE=3 SV=2)

HSP 1 Score: 381.719 bits (979), Expect = 2.980e-105
Identity = 180/220 (81.82%), Postives = 205/220 (93.18%), Query Frame = 3 
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+H VPIYEG+ALPHAI R+D+AGRDLTD LMKIL ERGY F+TTAEREIVRD+KEKL YVALD+EQE++TA  SSS+EK+YELPDGQ+ITIG ERFR PE LFQPS++G+E+ GIH TT+NSIMKCDVD+RKDLYGNIV+SGG+TM+PGI+DRM KEITALAPSSMK+K++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  156 GDGVTHVVPIYEGFALPHAISRVDMAGRDLTDYLMKILAERGYTFSTTAEREIVRDIKEKLCYVALDFEQEIQTASQSSSLEKSYELPDGQVITIGNERFRAPEALFQPSVLGLESGGIHVTTFNSIMKCDVDVRKDLYGNIVMSGGTTMYPGISDRMQKEITALAPSSMKVKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT4_TOBAC (Actin-66 (Fragment) OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 381.719 bits (979), Expect = 2.980e-105
Identity = 190/199 (95.48%), Postives = 197/199 (98.99%), Query Frame = 3 
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 608
            GDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTT+AEREIVRD+KEKLAYVALDYEQELETAKSSSSVEK+YELPDGQ+ITIG+ERFRCPEVLFQPSL+GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ
Sbjct:  138 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDCLMKILTERGYSFTTSAEREIVRDVKEKLAYVALDYEQELETAKSSSSVEKSYELPDGQVITIGSERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 336
[Close]
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT_NEUCR (Actin OS=Neurospora crassa GN=act-1 PE=3 SV=2)

HSP 1 Score: 380.948 bits (977), Expect = 5.083e-105
Identity = 179/220 (81.36%), Postives = 205/220 (93.18%), Query Frame = 3 
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+H VPIYEG+ALPHAI R+D+AGRDLTD LMKIL ERGY F+TTAEREIVRD+KEKL YVALD+EQE++TA  SSS+EK+YELPDGQ+ITIG ERFR PE LFQPS++G+E+ GIH TT+NSIMKCDVD+RKDLYGNIV+SGG+TM+PG++DRM KEITALAPSSMK+K++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  156 GDGVTHVVPIYEGFALPHAIARVDMAGRDLTDYLMKILAERGYTFSTTAEREIVRDIKEKLCYVALDFEQEIQTAAQSSSLEKSYELPDGQVITIGNERFRAPEALFQPSVLGLESGGIHVTTFNSIMKCDVDVRKDLYGNIVMSGGTTMYPGLSDRMQKEITALAPSSMKVKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT_GAEGA (Actin OS=Gaeumannomyces graminis var. avenae GN=ACT PE=2 SV=1)

HSP 1 Score: 380.948 bits (977), Expect = 5.083e-105
Identity = 179/220 (81.36%), Postives = 205/220 (93.18%), Query Frame = 3 
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+H VPIYEG+ALPHAI R+D+AGRDLTD LMKIL ERGY F+TTAEREIVRD+KEKL YVALD+EQE++TA  SSS+EK+YELPDGQ+ITIG ERFR PE LFQPS++G+E+ GIH TT+NSIMKCDVD+RKDLYGNIV+SGG+TM+PG++DRM KEITALAPSSMK+K++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  156 GDGVTHVVPIYEGFALPHAIARVDMAGRDLTDYLMKILAERGYTFSTTAEREIVRDIKEKLCYVALDFEQEIQTAAQSSSLEKSYELPDGQVITIGNERFRAPEALFQPSVLGLESGGIHVTTFNSIMKCDVDVRKDLYGNIVMSGGTTMYPGLSDRMQKEITALAPSSMKVKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT_BOTFU (Actin OS=Botryotinia fuckeliana GN=actA PE=3 SV=1)

HSP 1 Score: 380.948 bits (977), Expect = 5.083e-105
Identity = 179/220 (81.36%), Postives = 205/220 (93.18%), Query Frame = 3 
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+H VPIYEG++LPHAI R+D+AGRDLTD LMKIL ERGY F+TTAEREIVRD+KEKL YVALD+EQE++TA  SSS+EK+YELPDGQ+ITIG ERFR PE LFQPS++G+E+ GIH TT+NSIMKCDVD+RKDLYGNIV+SGG+TM+PGI+DRM KEITALAPSSMK+K++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  156 GDGVTHVVPIYEGFSLPHAIARVDMAGRDLTDYLMKILAERGYTFSTTAEREIVRDIKEKLCYVALDFEQEIQTASQSSSLEKSYELPDGQVITIGNERFRAPEALFQPSVLGLESGGIHVTTFNSIMKCDVDVRKDLYGNIVMSGGTTMYPGISDRMQKEITALAPSSMKVKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACTG_CEPAC (Actin, gamma OS=Cephalosporium acremonium GN=ACT PE=3 SV=1)

HSP 1 Score: 380.948 bits (977), Expect = 5.083e-105
Identity = 179/220 (81.36%), Postives = 205/220 (93.18%), Query Frame = 3 
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+H VPIYEG+ALPHAI R+D+AGRDLTD LMKIL ERGY F+TTAEREIVRD+KEKL YVALD+EQE++TA  SSS+EK+YELPDGQ+ITIG ERFR PE LFQPS++G+E+ GIH TT+NSIMKCDVD+RKDLYGNIV+SGG+TM+PG++DRM KEITALAPSSMK+K++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  156 GDGVTHVVPIYEGFALPHAIARVDMAGRDLTDYLMKILAERGYTFSTTAEREIVRDIKEKLCYVALDFEQEIQTAAQSSSLEKSYELPDGQVITIGNERFRAPEALFQPSVLGLESGGIHVTTFNSIMKCDVDVRKDLYGNIVMSGGTTMYPGLSDRMQKEITALAPSSMKVKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
[Close]
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACTBL_HUMAN (Beta-actin-like protein 2 OS=Homo sapiens GN=ACTBL2 PE=1 SV=2)

HSP 1 Score: 380.563 bits (976), Expect = 6.639e-105
Identity = 183/220 (83.18%), Postives = 202/220 (91.82%), Query Frame = 3 
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+H VPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIVRD+KEKL YVALD+EQE+  A +SSS E++YELPDGQ+ITIG ERFRCPE +FQPS +G+E++GIHETT+NSIMKCDVDIRKDLY N VLSGGSTM+PGIADRM KEI  LAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GP IVHRKCF
Sbjct:  157 GDGVTHIVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYNFTTTAEREIVRDVKEKLCYVALDFEQEMVRAAASSSPERSYELPDGQVITIGNERFRCPEAIFQPSFLGIESSGIHETTFNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEIITLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPPIVHRKCF 376
[Close]
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT5_TOBAC (Actin-93 (Fragment) OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 380.563 bits (976), Expect = 6.639e-105
Identity = 189/199 (94.97%), Postives = 197/199 (98.99%), Query Frame = 3 
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 608
            GDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIVRD+KEKLAY+ALDYEQELETAK+SSS+EK+YELPDGQ+ITIGAERFRCPEVLFQPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ
Sbjct:  138 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDVKEKLAYIALDYEQELETAKTSSSMEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 336
[Close]
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT3_TOBAC (Actin-54 (Fragment) OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 380.563 bits (976), Expect = 6.639e-105
Identity = 191/200 (95.50%), Postives = 197/200 (98.50%), Query Frame = 3 
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 611
            GDGVSH VPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETA+SSSS+EKNYELPDGQ+ITIGAERFRCPEVLFQPS+IGMEAAGIHETTYNSIMK DVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLST QQ+
Sbjct:  140 GDGVSHHVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETARSSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKRDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTLQQV 339
The following BLAST results are available for this feature:
BLAST of EY659349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 486
Match NameE-valueIdentityDescription
ACTM_MOLOC1.024e-10582.73Actin, larval muscle-type OS=Molgula oculata PE=3 ... [more]
ACTG_EMENI2.980e-10581.82Actin, gamma OS=Emericella nidulans GN=acnA PE=3 S... [more]
ACT4_TOBAC2.980e-10595.48Actin-66 (Fragment) OS=Nicotiana tabacum PE=3 SV=1[more]
ACT_NEUCR5.083e-10581.36Actin OS=Neurospora crassa GN=act-1 PE=3 SV=2[more]
ACT_GAEGA5.083e-10581.36Actin OS=Gaeumannomyces graminis var. avenae GN=AC... [more]
ACT_BOTFU5.083e-10581.36Actin OS=Botryotinia fuckeliana GN=actA PE=3 SV=1[more]
ACTG_CEPAC5.083e-10581.36Actin, gamma OS=Cephalosporium acremonium GN=ACT P... [more]
ACTBL_HUMAN6.639e-10583.18Beta-actin-like protein 2 OS=Homo sapiens GN=ACTBL... [more]
ACT5_TOBAC6.639e-10594.97Actin-93 (Fragment) OS=Nicotiana tabacum PE=3 SV=1[more]
ACT3_TOBAC6.639e-10595.50Actin-54 (Fragment) OS=Nicotiana tabacum PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659349 ID=EY659349; Name=EY659349; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGGGTGATGGTGTCTCTCATACTGTACCAATCTATGAGGGA
TATGCCCTTCCTCATGCCATTCTTCGTTTGGACTTGGCTGGTCGTGATCT
CACTGATGCATTGATGAAGATTCTTACTGAGAGAGGTTACATGTTTACCA
CCACAGCCGAACGGGAAATTGTCCGTGACATGAAGGAGAAGCTTGCTTAT
GTTGCCCTAGACTATGAGCAAGAACTTGAGACTGCCAAGAGCAGCTCATC
TGTTGAGAAGAACTATGAGCTGCCTGATGGCCAGATCATCACCATTGGAG
CTGAAAGATTCCGTTGCCCAGAAGTTCTGTTCCAGCCATCTCTCATCGGA
ATGGAAGCTGCTGGTATTCATGAGACTACCTACAACTCCATCATGAAGTG
TGATGTGGATATTAGAAAGGATCTGTATGGTAACATTGTTCTCAGTGGGG
GTTCAACTATGTTCCCTGGTATTGCCGACCGTATGAGCAAGGAAATCACA
GCACTTGCTCCAAGCAGCATGAAGATCAAGGTCGTGGCTCCACCAGAGAG
AAAATACAGTGTTTGGATTGGAGGATCAATCCTTGCATCCCTCAGCACCT
TCCAGCAGATGTGGATCTCAAAGGGCGAGTATGATGAGTCTGGTCCATCC
ATTGTCCACAGGAAATGCTTCTAAGTTCTTTAAGTGCTTGATGGGTGAGT
TCTTTTTTTCCATTTAGTTGGTTTTTTGTGTCTCGTTTCGCGAACTCAAG
TTGGTTGACATGGAGAAGTGCTAAGGATGGGGCCATTGAANGAGGCATAT
CTCGATATTTGATGTATTATACAGCTTCTTACAGCGTTTGAGGGGGGCTT
TATTCTGTACTCACCATCTTCCNTTGCTTGCATTCATCT
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