EY659349

Overview
NameEY659349
Unique NameEY659349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7281 contig Csv1_Contig7281:583..1472. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT_CALFI (Actin (Fragment) OS=Calanus finmarchicus PE=2 SV=1)

HSP 1 Score: 349.747 bits (896), Expect = 1.255e-95
Identity = 167/201 (83.08%), Postives = 187/201 (93.03%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMW 614
            GDGVSH VP+YEGYALPHAI+RLDLAGR+LT+ LMKILTERGY FTTTAEREIVRD+KEKL Y ALD+EQE+ TA +S+S+EK+YELPDGQ+ITIG ERFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N V+SGG+TM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMW
Sbjct:   78 GDGVSHGVPVYEGYALPHAIVRLDLAGRELTNYLMKILTERGYSFTTTAEREIVRDIKEKLCYEALDFEQEMSTAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMW 278          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT1_TETTH (Actin, macronuclear OS=Tetrahymena thermophila PE=1 SV=3)

HSP 1 Score: 348.206 bits (892), Expect = 3.652e-95
Identity = 166/220 (75.45%), Postives = 194/220 (88.18%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+HTVPIYEGYALPHAILR+DLAGR+LT+  MK+L E G  F++TAEREI+RD+KEKL YVA+DYE EL+  K SS  +K+YELPDG  IT+  +RFRCPE+LF+P+ IG E  GIHE T+NSIMKCDVD+RKD Y NIVLSGG+TMFPGIA+R+SKE++ALAPSSMKIKVVAPPER+YSVWIGGSIL+SLSTFQ MWI+K EYDESGPSIVHRKCF
Sbjct:  157 GDGVTHTVPIYEGYALPHAILRIDLAGRELTEYCMKLLYEIGLNFSSTAEREIIRDIKEKLCYVAIDYEAELKAYKESSQNDKSYELPDGNTITVQDQRFRCPELLFKPAFIGKEFPGIHELTFNSIMKCDVDVRKDPYNNIVLSGGTTMFPGIAERLSKEVSALAPSSMKIKVVAPPERRYSVWIGGSILSSLSTFQTMWITKAEYDESGPSIVHRKCF 376          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT17_DICDI (Actin-17 OS=Dictyostelium discoideum GN=act17 PE=3 SV=1)

HSP 1 Score: 346.28 bits (887), Expect = 1.388e-94
Identity = 166/220 (75.45%), Postives = 196/220 (89.09%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGVSHTVPI EG+++ HAI RLDLAG DLTD L K+L+ RGY F +  E EIVRD+KEKL+Y+ LD++ E++    SS++EK+YELPDG++I+IG E FRCPE LFQPS +GME+AGIHETTYNSIMKCDVDIRKDLY N+VLSGG+TMFPGIADRM+KE+TALAPS+MKIK++APPERKYSVWIGGS+L+SLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  157 GDGVSHTVPILEGHSINHAISRLDLAGNDLTDYLGKLLSGRGYPFISIDETEIVRDIKEKLSYITLDFQNEIKIV--SSALEKSYELPDGKVISIGNELFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYDNVVLSGGTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSMLSSLSTFQQMWISKEEYDESGPSIVHRKCF 374          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT2_SCHCO (Actin-2 OS=Schizophyllum commune GN=ACT2 PE=3 SV=1)

HSP 1 Score: 344.739 bits (883), Expect = 4.037e-94
Identity = 162/219 (73.97%), Postives = 193/219 (88.13%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKC 668
            GDGV+HTVPIYEG++LPHAI RLDLAGRDLT+ L+  LTERGY FTT+AE+E+VRD+KE+L YVALD++QEL TA  SS++EKNYELPDGQIITIG ERFR PEV FQPS  GME+ GI +  Y SI +CD+DIR++LYGNIV+SGG+TMFPGI+DRM +E++ +AP++MK+K+VAPPERKYSVWIGGSILASLSTFQ MW SK EYDESGP IVHRKC
Sbjct:  156 GDGVTHTVPIYEGFSLPHAIQRLDLAGRDLTERLVLHLTERGYTFTTSAEKEVVRDIKERLCYVALDFDQELITAAQSSALEKNYELPDGQIITIGNERFRAPEVFFQPSFAGMESGGIADLVYTSIQRCDLDIRRELYGNIVMSGGTTMFPGISDRMQRELSNMAPANMKVKIVAPPERKYSVWIGGSILASLSTFQNMWCSKQEYDESGPGIVHRKC 374          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT_TRIRE (Actin OS=Trichoderma reesei GN=act PE=3 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 5.273e-94
Identity = 170/222 (76.58%), Postives = 198/222 (89.19%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFP-GIADRMSKEITALAPSS-MKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+  VPIYEG+ALPHAI R+D+AGRDLTD LMKIL ERGY F+TTAEREIVRD+KEKL YVA D+EQE++TA  SSS+EK+YELPD Q+ITIG +RFR P+ LF  S++G+E+AGI  TT+NSIMKCDVD+RK+LYGNIV+SGG+TMFP GI+DRM KEITA APSS MK+K++APPERKYSVWIGGSILASL+TFQQMWISK EYDESGPSIVH KCF
Sbjct:  156 GDGVTTVVPIYEGFALPHAIRRVDMAGRDLTDYLMKILAERGYTFSTTAEREIVRDIKEKLCYVAHDFEQEIQTAAQSSSLEKSYELPDAQVITIG-DRFRAPQALFHASVLGLESAGIDVTTFNSIMKCDVDVRKELYGNIVMSGGTTMFPQGISDRMQKEITASAPSSAMKVKIIAPPERKYSVWIGGSILASLTTFQQMWISKQEYDESGPSIVHHKCF 376          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT_ACECL (Actin (Fragment) OS=Acetabularia cliftonii PE=3 SV=1)

HSP 1 Score: 343.969 bits (881), Expect = 6.886e-94
Identity = 172/220 (78.18%), Postives = 189/220 (85.91%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGVSHTVPIYEGYALPHAILRLDLAGRDLTD L K+L ERGY FTTTAEREIVRD+K+KL YVALD EQEL        +EK+YELPDGQ+IT+G+ERFRCPE LF P L+GM  +GI    +NSIMKCDVDIRKDLY N VLSGG+ MFPGI +RM KEIT LAPSSMKIKVVA PERK+SVWIGGSIL+SLSTFQQMWISK EYDE+GP+IVHRKCF
Sbjct:  138 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLTKLLMERGYSFTTTAEREIVRDIKKKLCYVALDIEQELTLLPR---LEKSYELPDGQVITVGSERFRCPEALFNPGLLGM-GSGIARYLFNSIMKCDVDIRKDLYSNTVLSGGTMMFPGIGERMQKEITTLAPSSMKIKVVASPERKFSVWIGGSILSSLSTFQQMWISKEEYDEAGPAIVHRKCF 353          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT_CRAVI (Actin (Fragment) OS=Crassostrea virginica PE=2 SV=1)

HSP 1 Score: 342.813 bits (878), Expect = 1.534e-93
Identity = 166/194 (85.57%), Postives = 181/194 (93.30%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASL 593
            GDGVSHTVPIYEGYALPHAI+RLDLAGRDLTD LMKILTERGY FTTTAEREIVRD+KEKL YVALD+EQE+ TA SSSS+EK+YELPDGQ+ITIG ERFRCPE +FQPS +GME+AGIHET+Y SIMKCDVDIRKDLY NIVLSGG+TMFPGIADRM KE+T LAP +MKIKV+APPERKYSVWIGGSILASL
Sbjct:   73 GDGVSHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETSYQSIMKCDVDIRKDLYANIVLSGGTTMFPGIADRMQKEVTTLAPPTMKIKVIAPPERKYSVWIGGSILASL 266          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT2_PLAFX (Actin-2 OS=Plasmodium falciparum (isolate HB3) PE=3 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 5.830e-93
Identity = 160/221 (72.40%), Postives = 193/221 (87.33%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKS-SSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGVSHTVPIYEGY LPHAI R+D+AGRDLT  +MK+ TERG+ FTTTAEREIVRD+KEKL Y+A+DY++EL+ ++  S  +E+ YELPDG +IT+G+ERFRCPE LF P+LIG E  G+H T Y SIMKCD+DIRK+LY NIVLSGG+TM+  I +R++KE+T LAPSSMKIKV+APPERKYSVWIGGSIL+SLSTFQQMWI+K EY++SGPSIVHRKCF
Sbjct:  156 GDGVSHTVPIYEGYVLPHAINRIDMAGRDLTYHMMKLFTERGHTFTTTAEREIVRDIKEKLCYIAMDYDEELKRSEEHSDEIEEIYELPDGNLITVGSERFRCPEALFNPTLIGRECPGLHITAYQSIMKCDIDIRKELYNNIVLSGGTTMYNNIGERLTKEMTNLAPSSMKIKVIAPPERKYSVWIGGSILSSLSTFQQMWITKEEYEDSGPSIVHRKCF 376          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT2_PLAF7 (Actin-2 OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0124 PE=3 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 5.830e-93
Identity = 160/221 (72.40%), Postives = 193/221 (87.33%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKS-SSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGVSHTVPIYEGY LPHAI R+D+AGRDLT  +MK+ TERG+ FTTTAEREIVRD+KEKL Y+A+DY++EL+ ++  S  +E+ YELPDG +IT+G+ERFRCPE LF P+LIG E  G+H T Y SIMKCD+DIRK+LY NIVLSGG+TM+  I +R++KE+T LAPSSMKIKV+APPERKYSVWIGGSIL+SLSTFQQMWI+K EY++SGPSIVHRKCF
Sbjct:  156 GDGVSHTVPIYEGYVLPHAINRIDMAGRDLTYHMMKLFTERGHTFTTTAEREIVRDIKEKLCYIAMDYDEELKRSEEHSDEIEEIYELPDGNLITVGSERFRCPEALFNPTLIGRECPGLHITAYQSIMKCDIDIRKELYNNIVLSGGTTMYNNIGERLTKEMTNLAPSSMKIKVIAPPERKYSVWIGGSILSSLSTFQQMWITKEEYEDSGPSIVHRKCF 376          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT24_DICDI (Putative actin-24 OS=Dictyostelium discoideum GN=act24 PE=3 SV=1)

HSP 1 Score: 340.117 bits (871), Expect = 9.944e-93
Identity = 164/221 (74.21%), Postives = 194/221 (87.78%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKIL-TERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGVS+TVP+YEG   P +I RL LAG DLTD + ++L T+ GY F+T AE+EIV+D+KEKLAYVALD+E E++TA SS S+EK+Y+LPDG++ITIG ERFRCPE LFQPSL+ M+  GIHETTYNSIMKCDVD  KDLYGN++LSGGSTMFPGIADRM+KE+TALAPS+MKIK++APPERKYS WIGGSILASLS+FQ  WISK EYDESGPSIVHRKC+
Sbjct:  157 GDGVSYTVPVYEGNTFPLSITRLHLAGGDLTDYMSRLLYTDCGYYFSTKAEKEIVKDIKEKLAYVALDFEAEMQTAASSPSLEKSYKLPDGRMITIGNERFRCPEALFQPSLLAMDYDGIHETTYNSIMKCDVDFHKDLYGNVLLSGGSTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSAWIGGSILASLSSFQPRWISKEEYDESGPSIVHRKCW 377          
The following BLAST results are available for this feature:
BLAST of EY659349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 486
Match NameE-valueIdentityDescription
ACT_CALFI1.255e-9583.08Actin (Fragment) OS=Calanus finmarchicus PE=2 SV=1[more]
ACT1_TETTH3.652e-9575.45Actin, macronuclear OS=Tetrahymena thermophila PE=... [more]
ACT17_DICDI1.388e-9475.45Actin-17 OS=Dictyostelium discoideum GN=act17 PE=3... [more]
ACT2_SCHCO4.037e-9473.97Actin-2 OS=Schizophyllum commune GN=ACT2 PE=3 SV=1[more]
ACT_TRIRE5.273e-9476.58Actin OS=Trichoderma reesei GN=act PE=3 SV=1[more]
ACT_ACECL6.886e-9478.18Actin (Fragment) OS=Acetabularia cliftonii PE=3 SV... [more]
ACT_CRAVI1.534e-9385.57Actin (Fragment) OS=Crassostrea virginica PE=2 SV=... [more]
ACT2_PLAFX5.830e-9372.40Actin-2 OS=Plasmodium falciparum (isolate HB3) PE=... [more]
ACT2_PLAF75.830e-9372.40Actin-2 OS=Plasmodium falciparum (isolate 3D7) GN=... [more]
ACT24_DICDI9.944e-9374.21Putative actin-24 OS=Dictyostelium discoideum GN=a... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659349 ID=EY659349; Name=EY659349; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGGGTGATGGTGTCTCTCATACTGTACCAATCTATGAGGGA
TATGCCCTTCCTCATGCCATTCTTCGTTTGGACTTGGCTGGTCGTGATCT
CACTGATGCATTGATGAAGATTCTTACTGAGAGAGGTTACATGTTTACCA
CCACAGCCGAACGGGAAATTGTCCGTGACATGAAGGAGAAGCTTGCTTAT
GTTGCCCTAGACTATGAGCAAGAACTTGAGACTGCCAAGAGCAGCTCATC
TGTTGAGAAGAACTATGAGCTGCCTGATGGCCAGATCATCACCATTGGAG
CTGAAAGATTCCGTTGCCCAGAAGTTCTGTTCCAGCCATCTCTCATCGGA
ATGGAAGCTGCTGGTATTCATGAGACTACCTACAACTCCATCATGAAGTG
TGATGTGGATATTAGAAAGGATCTGTATGGTAACATTGTTCTCAGTGGGG
GTTCAACTATGTTCCCTGGTATTGCCGACCGTATGAGCAAGGAAATCACA
GCACTTGCTCCAAGCAGCATGAAGATCAAGGTCGTGGCTCCACCAGAGAG
AAAATACAGTGTTTGGATTGGAGGATCAATCCTTGCATCCCTCAGCACCT
TCCAGCAGATGTGGATCTCAAAGGGCGAGTATGATGAGTCTGGTCCATCC
ATTGTCCACAGGAAATGCTTCTAAGTTCTTTAAGTGCTTGATGGGTGAGT
TCTTTTTTTCCATTTAGTTGGTTTTTTGTGTCTCGTTTCGCGAACTCAAG
TTGGTTGACATGGAGAAGTGCTAAGGATGGGGCCATTGAANGAGGCATAT
CTCGATATTTGATGTATTATACAGCTTCTTACAGCGTTTGAGGGGGGCTT
TATTCTGTACTCACCATCTTCCNTTGCTTGCATTCATCT
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