EY659349

Overview
NameEY659349
Unique NameEY659349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7281 contig Csv1_Contig7281:583..1472. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT2_TRYBB (Actin B OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 7.632e-85
Identity = 149/221 (67.42%), Postives = 188/221 (85.07%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGM-EAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+HTVPIYEGY+LPHAI R+D+AGRDLT+ LMKIL E G  FTT+A++EIVR++KE+L YVALD+++E+  +  S S E+ +ELPDG ++ +G +RFRCP+ LF+P+LIG+ EA G HE T+ SI KCD+D+R+DLYGNIVLSGG+TMF  + +R+ KEI+ LAPSS+K KVVAPPERKYSVWIGGSIL+SL+TFQ MWI+K EYDESGPSIVH KCF
Sbjct:  157 GDGVTHTVPIYEGYSLPHAIRRVDMAGRDLTEYLMKILMETGMTFTTSAQKEIVRNIKEQLCYVALDFDEEMTNSAKSVS-EEPFELPDGNVMQVGNQRFRCPQALFKPALIGLDEAPGFHEMTFQSINKCDIDVRRDLYGNIVLSGGTTMFKNLPERLGKEISNLAPSSIKPKVVAPPERKYSVWIGGSILSSLTTFQSMWITKSEYDESGPSIVHSKCF 376          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT1_TRYBB (Actin A OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 1.700e-84
Identity = 149/221 (67.42%), Postives = 187/221 (84.62%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGM-EAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+HTVPIYEGY+LPHAI R+D+AGRDLT+ LMKIL   G  FTT+AE+EIVR++KE+L YVALD+++E+  +  S S E+ +ELPDG ++ +G +RFRCPE LF+P+LIG+ EA G HE T+ SI KCD+D+R+DLYGNIVLSGG+TMF  + +R++KEI+ L PSS+K KVVAPPERKYSVWIGGSIL+SL+TFQ MWI+K EYDESGPSIVH KCF
Sbjct:  157 GDGVTHTVPIYEGYSLPHAIRRVDMAGRDLTEYLMKILMHTGMTFTTSAEKEIVRNIKEQLCYVALDFDEEMTNSAKSVS-EEPFELPDGNVMQVGNQRFRCPEALFKPALIGLDEAPGFHEMTFQSINKCDIDVRRDLYGNIVLSGGTTMFKNLPERLAKEISNLPPSSIKPKVVAPPERKYSVWIGGSILSSLTTFQSMWITKSEYDESGPSIVHSKCF 376          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT_TRYCR (Actin OS=Trypanosoma cruzi PE=3 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 4.947e-84
Identity = 149/221 (67.42%), Postives = 186/221 (84.16%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGM-EAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+HTVPIYEGY+LPHAI R+D+AGRDLT+ LMK+L E G  FTT+AE+EIVR++KE+L YVALD+++E+ T  + +  E+ +ELPDG I+ +G +RFRCPE LF+P LIG+ EA G HE T+ SI KCD+D+R+DLYGNIVLSGG+TMF  + +R+ KEI+ LAPSS+K KVVAPPERKYSVWIGGSIL+SL+TFQ MWI K EYDE+GPSIVH KCF
Sbjct:  157 GDGVTHTVPIYEGYSLPHAIRRMDMAGRDLTEYLMKLLMESGMTFTTSAEKEIVRNVKEQLCYVALDFDEEV-TNSAKTVNEEPFELPDGTIMQVGNQRFRCPEALFKPMLIGLDEAPGFHEMTFQSINKCDIDVRRDLYGNIVLSGGTTMFKNLPERLGKEISNLAPSSIKPKVVAPPERKYSVWIGGSILSSLTTFQTMWIKKSEYDEAGPSIVHNKCF 376          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT_PINCO (Actin (Fragment) OS=Pinus contorta PE=3 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 8.438e-84
Identity = 153/161 (95.03%), Postives = 158/161 (98.14%), Query Frame = 3
Query:  189 KLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            KLAYVALDYEQELET+KSSSS EKNYELPDGQ+IT+GAERFRC EVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K EY+ESGPSIVHRKCF
Sbjct:    1 KLAYVALDYEQELETSKSSSSQEKNYELPDGQVITVGAERFRCAEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKTEYEESGPSIVHRKCF 161          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACTM_LYTPI (Actin, muscle (Fragment) OS=Lytechinus pictus PE=3 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 7.897e-82
Identity = 145/172 (84.30%), Postives = 161/172 (93.60%), Query Frame = 3
Query:  156 AEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            AEREIVR++KEKL YVALD+EQE+ T  +SSS+EK+YELPDGQ+ITIG ERFRCPE LFQP+ IGME+AGIHETTYNSIMKCD+DIRKDLY N VLSGG++M+PGIADRM KEITALAPSSMKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:    1 AEREIVRNIKEKLCYVALDFEQEMATPAASSSLEKSYELPDGQVITIGNERFRCPETLFQPAFIGMESAGIHETTYNSIMKCDIDIRKDLYANTVLSGGTSMYPGIADRMQKEITALAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 172          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT3_LYTPI (Actin, cytoskeletal 3 (Fragment) OS=Lytechinus pictus PE=3 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 3.001e-81
Identity = 145/172 (84.30%), Postives = 159/172 (92.44%), Query Frame = 3
Query:  156 AEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            AEREIVR++KEKL YVALD+EQE++TA SSSS+EK+YELPDGQ+ITIG ERFRCPE LFQPS +GME+AGIHET YNSIMKCDVDIRK LY N VLSGGSTMFPGIADRM KEITA AP +MK+K++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:    1 AEREIVRNIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETCYNSIMKCDVDIRKFLYANTVLSGGSTMFPGIADRMQKEITAFAPPTMKVKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 172          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT1_OXYTR (Actin, cytoplasmic OS=Oxytricha trifallax PE=3 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 6.258e-79
Identity = 139/220 (63.18%), Postives = 176/220 (80.00%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQP-SLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKC 668
            GDGV+HTVPIYEG+++PHA+ R+ LAGRDLT  L K+LTERGY FT++AE EIVRD+KEKL +VALDYE  L+ +  SS  EKNYELPDG++ITIG+ERFRCPE LF+P  + G E   I + TY SI +CDVD+R+DLY NI+LSGG+TM+ GI +R+ KEI   AP S+ +KV+A P+R+++VW GGS L SLSTF  MWI+K +YDE+G SIVHRKC
Sbjct:  155 GDGVTHTVPIYEGFSIPHAVSRIQLAGRDLTTFLAKLLTERGYNFTSSAELEIVRDIKEKLCFVALDYESALKQSHDSSQFEKNYELPDGKVITIGSERFRCPEYLFKPLEMNGRELDSIQDLTYKSIQECDVDVRRDLYQNIILSGGTTMYEGIGERLLKEIENRAPKSINVKVIASPDRRFAVWRGGSTLTSLSTFASMWITKEDYDENGASIVHRKC 374          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT2_OXYFA (Actin, cytoplasmic OS=Oxytricha fallax PE=3 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 2.378e-78
Identity = 138/220 (62.73%), Postives = 176/220 (80.00%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQP-SLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKC 668
            GDGV+HTVPIYEG+++PHA+ R+ LAGRDLT  L K+LTERGY FT++AE EIVRD+KEKL +VAL+YE  L+ +  SS  EKNYELPDG++ITIG+ERFRCPE LF+P  + G E   I + TY SI +CDVD+R+DLY NI+LSGG+TM+ GI +R+ KEI   AP S+ +KV+A P+R+++VW GGS L SLSTF  MWI+K +YDE+G SIVHRKC
Sbjct:  137 GDGVTHTVPIYEGFSIPHAVSRIQLAGRDLTTFLAKLLTERGYNFTSSAELEIVRDIKEKLCFVALNYESALKQSHDSSQFEKNYELPDGKVITIGSERFRCPEYLFKPLEMNGRELDSIQDLTYKSIQECDVDVRRDLYQNIILSGGTTMYEGIGERLLKEIENRAPKSINVKVIASPDRRFAVWRGGSTLTSLSTFASMWITKEDYDENGASIVHRKC 356          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT2_OXYNO (Actin, cytoplasmic OS=Oxytricha nova GN=MIC-ACT-1 PE=3 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 3.106e-78
Identity = 136/220 (61.82%), Postives = 177/220 (80.45%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQP-SLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKC 668
            GDGV+HTVPIYEG+++PHA+ R+ LAGRDLT  + K+LTE+GY+FT++AE EIVRD+KEKL +VALDYE  ++ +  S++ EKNYELPDG++ITIG  RFRCPE LF+P  + G E   I   TYNSI +CDVD+R+DLY NI+LSGG+TM+ GI +R+ KEI A AP S+ +KV+A P+R+++VW GGS L SLSTF  MWI+K +YDE+G SIVHRKC
Sbjct:  155 GDGVTHTVPIYEGFSIPHAVSRIQLAGRDLTTFMAKLLTEKGYVFTSSAEMEIVRDIKEKLCFVALDYEAAMKQSYESTTFEKNYELPDGRVITIGNARFRCPEYLFKPLEMNGKELDSIQSLTYNSIQECDVDVRRDLYQNIILSGGTTMYEGIGERLLKEIEARAPKSINVKVIASPDRRFAVWRGGSTLTSLSTFASMWITKEDYDENGASIVHRKC 374          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT1_OXYNO (Actin, cytoplasmic OS=Oxytricha nova PE=3 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 6.919e-78
Identity = 136/220 (61.82%), Postives = 176/220 (80.00%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQP-SLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKC 668
            GDGV+HTVPIYEG+++PHA+ R+ LAGRDLT  + K+LTE+GY+FT++AE EIVRD+KEKL +VALDYE  ++ +  S++ EKNYELPDG++ITIG  RFRCPE LF+P  + G E   I   TYNSI +CDVD+R+DLY NI LSGG+TM+ GI +R+ KEI A AP S+ +KV+A P+R+++VW GGS L SLSTF  MWI+K +YDE+G SIVHRKC
Sbjct:  155 GDGVTHTVPIYEGFSIPHAVSRIQLAGRDLTTFMAKLLTEKGYVFTSSAEMEIVRDIKEKLCFVALDYEAAMKQSYESTTFEKNYELPDGRVITIGNARFRCPEYLFKPLEMNGKELDSIQSLTYNSIQECDVDVRRDLYQNITLSGGTTMYEGIGERLLKEIEARAPKSINVKVIASPDRRFAVWRGGSTLTSLSTFASMWITKEDYDENGASIVHRKC 374          
The following BLAST results are available for this feature:
BLAST of EY659349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 486
Match NameE-valueIdentityDescription
ACT2_TRYBB7.632e-8567.42Actin B OS=Trypanosoma brucei brucei PE=3 SV=1[more]
ACT1_TRYBB1.700e-8467.42Actin A OS=Trypanosoma brucei brucei PE=3 SV=1[more]
ACT_TRYCR4.947e-8467.42Actin OS=Trypanosoma cruzi PE=3 SV=1[more]
ACT_PINCO8.438e-8495.03Actin (Fragment) OS=Pinus contorta PE=3 SV=1[more]
ACTM_LYTPI7.897e-8284.30Actin, muscle (Fragment) OS=Lytechinus pictus PE=3... [more]
ACT3_LYTPI3.001e-8184.30Actin, cytoskeletal 3 (Fragment) OS=Lytechinus pic... [more]
ACT1_OXYTR6.258e-7963.18Actin, cytoplasmic OS=Oxytricha trifallax PE=3 SV=... [more]
ACT2_OXYFA2.378e-7862.73Actin, cytoplasmic OS=Oxytricha fallax PE=3 SV=1[more]
ACT2_OXYNO3.106e-7861.82Actin, cytoplasmic OS=Oxytricha nova GN=MIC-ACT-1 ... [more]
ACT1_OXYNO6.919e-7861.82Actin, cytoplasmic OS=Oxytricha nova PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659349 ID=EY659349; Name=EY659349; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGGGTGATGGTGTCTCTCATACTGTACCAATCTATGAGGGA
TATGCCCTTCCTCATGCCATTCTTCGTTTGGACTTGGCTGGTCGTGATCT
CACTGATGCATTGATGAAGATTCTTACTGAGAGAGGTTACATGTTTACCA
CCACAGCCGAACGGGAAATTGTCCGTGACATGAAGGAGAAGCTTGCTTAT
GTTGCCCTAGACTATGAGCAAGAACTTGAGACTGCCAAGAGCAGCTCATC
TGTTGAGAAGAACTATGAGCTGCCTGATGGCCAGATCATCACCATTGGAG
CTGAAAGATTCCGTTGCCCAGAAGTTCTGTTCCAGCCATCTCTCATCGGA
ATGGAAGCTGCTGGTATTCATGAGACTACCTACAACTCCATCATGAAGTG
TGATGTGGATATTAGAAAGGATCTGTATGGTAACATTGTTCTCAGTGGGG
GTTCAACTATGTTCCCTGGTATTGCCGACCGTATGAGCAAGGAAATCACA
GCACTTGCTCCAAGCAGCATGAAGATCAAGGTCGTGGCTCCACCAGAGAG
AAAATACAGTGTTTGGATTGGAGGATCAATCCTTGCATCCCTCAGCACCT
TCCAGCAGATGTGGATCTCAAAGGGCGAGTATGATGAGTCTGGTCCATCC
ATTGTCCACAGGAAATGCTTCTAAGTTCTTTAAGTGCTTGATGGGTGAGT
TCTTTTTTTCCATTTAGTTGGTTTTTTGTGTCTCGTTTCGCGAACTCAAG
TTGGTTGACATGGAGAAGTGCTAAGGATGGGGCCATTGAANGAGGCATAT
CTCGATATTTGATGTATTATACAGCTTCTTACAGCGTTTGAGGGGGGCTT
TATTCTGTACTCACCATCTTCCNTTGCTTGCATTCATCT
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