EY659349

Overview
NameEY659349
Unique NameEY659349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7281 contig Csv1_Contig7281:583..1472. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT_HISCA (Actin OS=Histriculus cavicola PE=3 SV=2)

HSP 1 Score: 289.656 bits (740), Expect = 1.541e-77
Identity = 138/220 (62.73%), Postives = 174/220 (79.09%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQP-SLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKC 668
            GDGV+HTVPIYEG+++PHA+ R+ LAGRDLT  + K+LTERGY FT++AE EIVRD+KEKL +VALDYE  L+ +  SS+ EKNYELPDG+IITIG+ERFRCPE LF+P  + G E   I + TY SI +CDVD+R+DLY  I+LSGGST   GI +R+ KEI   AP S+ +KV+A P+R+++VW GGS L SLSTF  MWI+K +YDE+G SIVHRKC
Sbjct:  155 GDGVTHTVPIYEGFSIPHAVSRIQLAGRDLTTFMAKLLTERGYSFTSSAELEIVRDIKEKLCFVALDYEAALKQSHDSSTFEKNYELPDGKIITIGSERFRCPEYLFKPLEMNGKELDSIQDLTYKSIQECDVDVRRDLYQTIILSGGSTSIEGIGERLLKEIENRAPKSINVKVIASPDRRFAVWRGGSTLTSLSTFASMWITKEDYDENGASIVHRKC 374          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACTY_DROME (Actin-like protein 53D OS=Drosophila melanogaster GN=Arp53D PE=2 SV=2)

HSP 1 Score: 284.263 bits (726), Expect = 6.476e-76
Identity = 137/220 (62.27%), Postives = 173/220 (78.64%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+HTVPIYEG+ALPHA +R+DLAGRDLTD L K+L ERG    T+AEREIVR++KEKL YV+++Y +E++       VE  YELPDGQ I +G ERFRCPE LFQPSL+G E  GIHE T++SI  CD+D+RKD+Y NIVLSGG+TMF  I  R  +++T +AP S++IKV A P+R++SVW GGS+LASL++FQ MWI   EY+E G +IVHRKCF
Sbjct:  161 GDGVTHTVPIYEGFALPHACVRVDLAGRDLTDYLCKLLLERGVTMGTSAEREIVREIKEKLCYVSMNYAKEMDL---HGKVE-TYELPDGQKIVLGCERFRCPEALFQPSLLGQEVMGIHEATHHSITNCDMDLRKDMYANIVLSGGTTMFRNIEHRFLQDLTEMAPPSIRIKVNASPDRRFSVWTGGSVLASLTSFQNMWIDSLEYEEVGSAIVHRKCF 376          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT1_OXYFA (Actin, macronuclear OS=Oxytricha fallax PE=3 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 1.105e-75
Identity = 133/220 (60.45%), Postives = 173/220 (78.64%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQP-SLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKC 668
            GDG++HTVPIYEG+++PHA+  + LAGRDLT  L K+ TERGY FT++AE EIVRD+KEKL ++AL+YE  L+ +  SS  EKNYELP G++ITIG+ERFRCPE LF+P  + G E   I + TY SI +CDVD+R+DLY NI+LSGG+TM+ GI +R+ KEI   AP S+ +KV+A P+R+++VW GGS L SLSTF  MWI+K +YDE+G SIVHRKC
Sbjct:  137 GDGLTHTVPIYEGFSIPHAVSTIQLAGRDLTTFLAKLFTERGYNFTSSAELEIVRDIKEKLCFLALNYESALKQSHDSSQFEKNYELPHGKVITIGSERFRCPEYLFKPLEMNGRELDSIQDLTYKSIQECDVDVRRDLYQNIILSGGTTMYEGIGERLLKEIENRAPKSINVKVIASPDRRFAVWRGGSTLTSLSTFASMWITKEDYDENGASIVHRKC 356          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT2_OXYTR (Actin, cytoplasmic OS=Oxytricha trifallax PE=3 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 4.197e-75
Identity = 134/220 (60.91%), Postives = 172/220 (78.18%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQP-SLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKC 668
            GDGV+HTVPIYEG+++PHA+ R+ LAGRDLT  + K+LTERGY FT++AE EIVRD+KEKL +VAL+YE  L+ +  SS  EKNYELPDG++ITIG+ERFRCPE LF+P  + G E   I + TY SI +CDVD+R+DLY NI++SGG+TM  GI +R+ KEI   AP S+ +KV+A  +R ++VW GGS   SLSTF  MWI+K +YDE+G SIVHRKC
Sbjct:  155 GDGVTHTVPIYEGFSIPHAVSRIQLAGRDLTTFMAKLLTERGYNFTSSAELEIVRDIKEKLCFVALEYESALKQSHDSSQFEKNYELPDGKVITIGSERFRCPEYLFKPLEMNGRELDSIQDLTYKSIQECDVDVRRDLYQNIIISGGTTMNEGIGERLLKEIENRAPKSINVKVIASADRIFAVWRGGSTRTSLSTFASMWITKEDYDENGASIVHRKC 374          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT_EUPCR (Actin, cytoplasmic OS=Euplotes crassus PE=3 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 7.160e-75
Identity = 131/219 (59.82%), Postives = 168/219 (76.71%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKC 668
            GDGV+H VPI+EGY +PHAI ++ LAGRDLTD + +IL +  Y F TTAE+E VRD+KEKL YVA DYE EL+ A     +E++Y LPDG+ + I  +RF+CPE LFQP L G E   +H+ TY+SIM CD+D+RKDLY NI+LSGG+TMFPG+ +R+ KE+  LAP +MK+KV+A P+RKY+VW GGS LA LSTF  MW++K +Y E G SIVHRKC
Sbjct:  160 GDGVTHVVPIFEGYQIPHAIEKILLAGRDLTDYMCRILKDDDYHFETTAEKETVRDIKEKLCYVADDYEAELKKAGEGGELEESYALPDGRPLKISTQRFQCPEFLFQPDLGGRECKSVHQLTYDSIMTCDLDVRKDLYANIILSGGTTMFPGLGERLYKEMKDLAPQTMKVKVIASPDRKYAVWRGGSTLAKLSTFAGMWVTKEDYAEFGESIVHRKC 378          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT26_DICDI (Putative actin-26 OS=Dictyostelium discoideum GN=act26 PE=3 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 2.083e-74
Identity = 134/218 (61.47%), Postives = 171/218 (78.44%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRK 665
            GD V+HTVPIY GY L H+I+RL+ AG DLT+ + K+L ERGY FTTT+E EIV+ +KEKLAYVA+++  E+  +K   ++E  Y+LPDGQII IG ERFRC E LFQPS+IG+E  GIHET + SIM CD+DIRK +Y NI+LSGG+TM  GI+DR+  ++  LAP++MKI +VA PERK  VWIGGSIL +L  FQ+MWISK EYDE GPSI+++K
Sbjct:  156 GDDVTHTVPIYGGYVLQHSIIRLNFAGSDLTEYMAKLLLERGYSFTTTSEMEIVKSIKEKLAYVAINFNAEM--SKPIDTLETTYQLPDGQIIIIGNERFRCAEALFQPSMIGLECDGIHETIFKSIMMCDIDIRKHMYANILLSGGNTMLSGISDRIYNQLRELAPNNMKILIVASPERKNLVWIGGSILTTLPLFQEMWISKEEYDEHGPSIINKK 371          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT_GIALA (Actin OS=Giardia lamblia PE=3 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 5.310e-70
Identity = 119/219 (54.34%), Postives = 163/219 (74.43%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKC 668
            GDGV+HTVP+YEGY+LPHA+LR ++AG++LTD     L E G  FTT+AE EIVRD+KEKL +VALDYE  L  +  S++  K YELPDG +IT+   RF+ PE+LF+P L   +  GIH+  Y +I KCD+DIR +LY N+VLSGGS+MF G+ +R+ KE+  L P+  ++++ +P +RKYS W+GGS+L SL+TF+ MW+S  EY E+G SI +RKC
Sbjct:  156 GDGVTHTVPVYEGYSLPHAVLRSEIAGKELTDFCQINLQENGASFTTSAEFEIVRDIKEKLCFVALDYESVLAASMESANYTKTYELPDGVVITVNQARFKTPELLFRPELNNSDMDGIHQLCYKTIQKCDIDIRSELYSNVVLSGGSSMFAGLPERLEKELLDLIPAGKRVRISSPEDRKYSAWVGGSVLGSLATFESMWVSSQEYQENGASIANRKC 374          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACTY_DICDI (Centractin OS=Dictyostelium discoideum GN=arpA PE=1 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 5.310e-70
Identity = 124/224 (55.36%), Postives = 164/224 (73.21%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELET----AKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+H VP++EG+ALPHAI R+D+AGRD+T+ L  +L   GY F T+AE+E+VR +KEK  YVA D ++E E     + SS  V+  Y LPDG +I +GAERFR PE+LF P +IG E+ GIH+    SI K D+D+RK  Y NI+L GGST+F G  DR+  E+  LAP  +KIK+ APPERKYS W+GGSILASLSTF+ +W+++ EY+E G S++HRK F
Sbjct:  160 GDGVTHVVPVFEGFALPHAISRIDIAGRDITEYLQHLLRRSGYNFKTSAEKEVVRIIKEKTCYVAHDPQKEEELLEPDSSSSKPVQPQYTLPDGNVIELGAERFRAPEILFHPDIIGDESLGIHQCLDMSIRKSDLDLRKTFYSNIILGGGSTLFQGFGDRLLNEVKKLAPKDIKIKITAPPERKYSAWMGGSILASLSTFKDLWVTRQEYEEDGCSVIHRKIF 383          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT4_LYTPI (Actin, cytoskeletal 4 (Fragment) OS=Lytechinus pictus PE=3 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 9.057e-70
Identity = 126/154 (81.82%), Postives = 141/154 (91.56%), Query Frame = 3
Query:  186 EKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGP 647
            EKL YVALD+EQE++TA SSSS+EK+YELPDGQ+IT G ERFR PE L+QPS +GME++GIHETTYNSIM CDVDIRKDLY N VLSGGST+FPGIADRM KEIT+LAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP
Sbjct:    1 EKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITTGNERFRAPESLYQPSFLGMESSGIHETTYNSIMMCDVDIRKDLYANTVLSGGSTIFPGIADRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP 154          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACTZ_PNECA (Actin-2 OS=Pneumocystis carinii PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 5.143e-65
Identity = 125/225 (55.56%), Postives = 165/225 (73.33%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALD-YEQELETAKSSSSVEKNY------ELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRK 665
            GDGV+H VPIYEG+A+P AI R+D+AGRD+T+ L  +L + G +F T+AE+EIVR +KEK +YV LD  ++E E   +S S  K+Y      +LPDG ++ +GAERFR PE+LF P +IG E +GIH+   ++I + D+D+RK L+GNIVLSGGST+  G  DR+  EI  LA   +KIK+ APPERKYS WIGGSILASLSTF++MW+S  EY E  P I+HRK
Sbjct:  160 GDGVTHAVPIYEGFAMPSAIRRIDIAGRDVTEYLQLLLRKSGTIFHTSAEKEIVRIIKEKCSYVTLDPRKEEKEWINASISGGKDYTKEEEFKLPDGNVLRLGAERFRAPEILFDPEIIGSEYSGIHQVVVDAISRVDLDLRKSLFGNIVLSGGSTLTRGFGDRLLSEIRRLAVKDVKIKIFAPPERKYSTWIGGSILASLSTFRKMWVSAEEYQED-PDIIHRK 383          
The following BLAST results are available for this feature:
BLAST of EY659349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 486
Match NameE-valueIdentityDescription
ACT_HISCA1.541e-7762.73Actin OS=Histriculus cavicola PE=3 SV=2[more]
ACTY_DROME6.476e-7662.27Actin-like protein 53D OS=Drosophila melanogaster ... [more]
ACT1_OXYFA1.105e-7560.45Actin, macronuclear OS=Oxytricha fallax PE=3 SV=1[more]
ACT2_OXYTR4.197e-7560.91Actin, cytoplasmic OS=Oxytricha trifallax PE=3 SV=... [more]
ACT_EUPCR7.160e-7559.82Actin, cytoplasmic OS=Euplotes crassus PE=3 SV=1[more]
ACT26_DICDI2.083e-7461.47Putative actin-26 OS=Dictyostelium discoideum GN=a... [more]
ACT_GIALA5.310e-7054.34Actin OS=Giardia lamblia PE=3 SV=1[more]
ACTY_DICDI5.310e-7055.36Centractin OS=Dictyostelium discoideum GN=arpA PE=... [more]
ACT4_LYTPI9.057e-7081.82Actin, cytoskeletal 4 (Fragment) OS=Lytechinus pic... [more]
ACTZ_PNECA5.143e-6555.56Actin-2 OS=Pneumocystis carinii PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659349 ID=EY659349; Name=EY659349; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGGGTGATGGTGTCTCTCATACTGTACCAATCTATGAGGGA
TATGCCCTTCCTCATGCCATTCTTCGTTTGGACTTGGCTGGTCGTGATCT
CACTGATGCATTGATGAAGATTCTTACTGAGAGAGGTTACATGTTTACCA
CCACAGCCGAACGGGAAATTGTCCGTGACATGAAGGAGAAGCTTGCTTAT
GTTGCCCTAGACTATGAGCAAGAACTTGAGACTGCCAAGAGCAGCTCATC
TGTTGAGAAGAACTATGAGCTGCCTGATGGCCAGATCATCACCATTGGAG
CTGAAAGATTCCGTTGCCCAGAAGTTCTGTTCCAGCCATCTCTCATCGGA
ATGGAAGCTGCTGGTATTCATGAGACTACCTACAACTCCATCATGAAGTG
TGATGTGGATATTAGAAAGGATCTGTATGGTAACATTGTTCTCAGTGGGG
GTTCAACTATGTTCCCTGGTATTGCCGACCGTATGAGCAAGGAAATCACA
GCACTTGCTCCAAGCAGCATGAAGATCAAGGTCGTGGCTCCACCAGAGAG
AAAATACAGTGTTTGGATTGGAGGATCAATCCTTGCATCCCTCAGCACCT
TCCAGCAGATGTGGATCTCAAAGGGCGAGTATGATGAGTCTGGTCCATCC
ATTGTCCACAGGAAATGCTTCTAAGTTCTTTAAGTGCTTGATGGGTGAGT
TCTTTTTTTCCATTTAGTTGGTTTTTTGTGTCTCGTTTCGCGAACTCAAG
TTGGTTGACATGGAGAAGTGCTAAGGATGGGGCCATTGAANGAGGCATAT
CTCGATATTTGATGTATTATACAGCTTCTTACAGCGTTTGAGGGGGGCTT
TATTCTGTACTCACCATCTTCCNTTGCTTGCATTCATCT
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