EY659349

Overview
NameEY659349
Unique NameEY659349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7281 contig Csv1_Contig7281:583..1472. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT29_DICDI (Putative actin-29 OS=Dictyostelium discoideum GN=act29 PE=3 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 6.717e-65
Identity = 120/225 (53.33%), Postives = 170/225 (75.56%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTE-RGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAK-SSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVV---APPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            G+ +++TVPIYEG+++P++I +L++AG  +T+ LMKIL E RGY FTT++E+EIV+D+KEK  +++L+Y  +L + K +++ +EK+Y+LPDGQ+ITIG ERF C EVLF+PSL+ +E+ G+H+  YNSI+ CD +IR+ LY NI+LSGG+TM P   DR+  E+  L+PSSMKIKVV         +  WIGGSI +SLSTF+Q  ISK EY E G  I+ RKCF
Sbjct:  163 GNNITYTVPIYEGHSIPNSINQLEIAGNSVTEYLMKILNENRGYNFTTSSEKEIVKDIKEKFGFISLNYNNDLYSTKVATNEIEKSYQLPDGQMITIGKERFICGEVLFEPSLVNIESYGVHQLLYNSIINCDFEIRRGLYNNIILSGGTTMLPDFNDRIKNELINLSPSSMKIKVVENNTNENNSHLAWIGGSIFSSLSTFEQQSISKQEYMEYGSKIIQRKCF 387          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARPM1_HUMAN (Actin-related protein M1 OS=Homo sapiens GN=ARPM1 PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.267e-63
Identity = 112/220 (50.91%), Postives = 159/220 (72.27%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            G GV+ +VPI+EGY LPH + +LDLAG DLT+ LM ++   G M  + ++R+IV D+KE   YVA++YE+E+  AK    +EK Y+LPDG++I +  + F CPE LF P  + +EA GI +  ++SIMKCD  +R   + NI+L+GGST FPG+  R+ K+I  +AP++  ++V+APPERK SVW+GGSILASLS FQ MWI+  E+ E GP+IVH++CF
Sbjct:  155 GAGVTQSVPIFEGYCLPHGVQQLDLAGLDLTNYLMVLMKNHGIMLLSASDRKIVEDIKESFCYVAMNYEEEM--AKKPDCLEKVYQLPDGKVIQLHDQLFSCPEALFSPCHMNLEAPGIDKICFSSIMKCDTGLRNSFFSNIILAGGSTSFPGLDKRLVKDIAKVAPANTAVQVIAPPERKISVWMGGSILASLSAFQDMWITAAEFKEVGPNIVHQRCF 372          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACTZ_DROME (Actin-like protein 87C OS=Drosophila melanogaster GN=Arp87C PE=1 SV=2)

HSP 1 Score: 240.736 bits (613), Expect = 8.211e-63
Identity = 119/220 (54.09%), Postives = 157/220 (71.36%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+H VPIYEG+A+PH+I+R+D+AGRD+T  L  ++   G+ F +TAE EIVR +KEK+ Y+A + ++E ET ++       Y+LPDG+I  IG  RFR PEVLF+P L+G E  GIH+    SI K D+D+RK LY NIVLSGGST+F G  DR+  E+   +   +KI++ AP ER YS W+GGSILASL TF++MWISK EY+E G   VHRK F
Sbjct:  161 GDGVTHAVPIYEGFAMPHSIMRVDIAGRDVTRYLKTLIRREGFNFRSTAEFEIVRSIKEKVCYLATNPQKE-ETVETEKFA---YKLPDGKIFEIGPARFRAPEVLFRPDLLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSGGSTLFKGFGDRLLSELKKHSAKDLKIRIAAPQERLYSTWMGGSILASLDTFKKMWISKREYEEEGQKAVHRKTF 376          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACTZ_NEUCR (Actin-like protein OS=Neurospora crassa GN=ro-4 PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.829e-62
Identity = 116/221 (52.49%), Postives = 159/221 (71.95%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALD---YEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRK 665
            GDGVSH VP+Y+G+ +P++I R+D+AGRD+T+ L  +L + GY+F T+AE+E+VR +KE + YVA D    E+E   AK   +    Y LPDG  + IGAERFR PE+LF P +IG+E  G+H+   +SI + D+D+R+DLY NIVLSGGST+  G  DR+  E+  LA   M+IK+ APPERKYS WIGGSILA LSTF++MW+S  ++ E+ P I+H K
Sbjct:  159 GDGVSHAVPVYQGFTVPNSIRRIDVAGRDVTEYLQTLLRKSGYVFHTSAEKEVVRLIKESVTYVAHDPRKEEKEWAAAKMDPAKIAEYVLPDGNKLKIGAERFRAPEILFDPEIIGLEYPGVHQIVVDSINRTDLDLRRDLYSNIVLSGGSTLTKGFGDRLLTEVQKLAVKDMRIKIFAPPERKYSTWIGGSILAGLSTFRKMWVSIDDWHEN-PDIIHTK 378          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARPM1_MOUSE (Actin-related protein M1 homolog OS=Mus musculus GN=Arpm1 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 6.951e-62
Identity = 109/220 (49.55%), Postives = 154/220 (70.00%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            G G++  VPI+EGY L H + +L++AG DLT  LM +L   G M   T +R++V D+KE   YVA++YE E+      S++EK Y LPDG+ + +  + F CPE LF P L+ ++A GI +  + SIMKCD D+R   + NI+LSGGST FPG+  R+ K++  LAP++  ++V+APPERK SVW+GGSILASLS FQ MWI+  E++E GP+IVH++CF
Sbjct:  153 GAGITQCVPIFEGYCLSHGVKQLNVAGSDLTSYLMMLLKGDGIMLLRTGDRKVVTDIKENACYVAMNYEDEMT---KDSNLEKIYTLPDGKTVKLHKQLFHCPEALFSPYLVNVDAPGIDKMCFGSIMKCDTDLRNSFFSNIILSGGSTSFPGLDKRLIKDVAKLAPANTAVQVIAPPERKISVWMGGSILASLSAFQDMWITAAEFEEVGPNIVHQRCF 369          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACTZ_RAT (Alpha-centractin OS=Rattus norvegicus GN=Actr1a PE=1 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 6.951e-62
Identity = 116/222 (52.25%), Postives = 159/222 (71.62%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQE--LETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+H VPIYEG+A+PH+I+R+D+AGRD++  L   L + GY F +++E EIV+ +KE+  Y++++ +++  LET K+       Y LPDG  I IG  RFR PE+LF+P LIG E+ GIHE    +I K D+D+R+ L+ NIVLSGGST+F G  DR+  E+  LAP  +KI++ AP ER YS WIGGSILASL TF++MW+SK EY+E G   +HRK F
Sbjct:  161 GDGVTHAVPIYEGFAMPHSIMRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ------YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGARSIHRKTF 376          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACTZ_MOUSE (Alpha-centractin OS=Mus musculus GN=Actr1a PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 6.951e-62
Identity = 116/222 (52.25%), Postives = 159/222 (71.62%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQE--LETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+H VPIYEG+A+PH+I+R+D+AGRD++  L   L + GY F +++E EIV+ +KE+  Y++++ +++  LET K+       Y LPDG  I IG  RFR PE+LF+P LIG E+ GIHE    +I K D+D+R+ L+ NIVLSGGST+F G  DR+  E+  LAP  +KI++ AP ER YS WIGGSILASL TF++MW+SK EY+E G   +HRK F
Sbjct:  161 GDGVTHAVPIYEGFAMPHSIMRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ------YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGARSIHRKTF 376          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACTZ_MACFA (Alpha-centractin OS=Macaca fascicularis GN=ACTR1A PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 6.951e-62
Identity = 116/222 (52.25%), Postives = 159/222 (71.62%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQE--LETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+H VPIYEG+A+PH+I+R+D+AGRD++  L   L + GY F +++E EIV+ +KE+  Y++++ +++  LET K+       Y LPDG  I IG  RFR PE+LF+P LIG E+ GIHE    +I K D+D+R+ L+ NIVLSGGST+F G  DR+  E+  LAP  +KI++ AP ER YS WIGGSILASL TF++MW+SK EY+E G   +HRK F
Sbjct:  161 GDGVTHAVPIYEGFAMPHSIMRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ------YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGARSIHRKTF 376          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACTZ_HUMAN (Alpha-centractin OS=Homo sapiens GN=ACTR1A PE=1 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 6.951e-62
Identity = 116/222 (52.25%), Postives = 159/222 (71.62%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQE--LETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+H VPIYEG+A+PH+I+R+D+AGRD++  L   L + GY F +++E EIV+ +KE+  Y++++ +++  LET K+       Y LPDG  I IG  RFR PE+LF+P LIG E+ GIHE    +I K D+D+R+ L+ NIVLSGGST+F G  DR+  E+  LAP  +KI++ AP ER YS WIGGSILASL TF++MW+SK EY+E G   +HRK F
Sbjct:  161 GDGVTHAVPIYEGFAMPHSIMRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ------YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGARSIHRKTF 376          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACTZ_CANFA (Alpha-centractin OS=Canis familiaris GN=ACTR1A PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 6.951e-62
Identity = 116/222 (52.25%), Postives = 159/222 (71.62%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQE--LETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+H VPIYEG+A+PH+I+R+D+AGRD++  L   L + GY F +++E EIV+ +KE+  Y++++ +++  LET K+       Y LPDG  I IG  RFR PE+LF+P LIG E+ GIHE    +I K D+D+R+ L+ NIVLSGGST+F G  DR+  E+  LAP  +KI++ AP ER YS WIGGSILASL TF++MW+SK EY+E G   +HRK F
Sbjct:  161 GDGVTHAVPIYEGFAMPHSIMRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQ------YYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGARSIHRKTF 376          
The following BLAST results are available for this feature:
BLAST of EY659349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 486
Match NameE-valueIdentityDescription
ACT29_DICDI6.717e-6553.33Putative actin-29 OS=Dictyostelium discoideum GN=a... [more]
ARPM1_HUMAN1.267e-6350.91Actin-related protein M1 OS=Homo sapiens GN=ARPM1 ... [more]
ACTZ_DROME8.211e-6354.09Actin-like protein 87C OS=Drosophila melanogaster ... [more]
ACTZ_NEUCR1.829e-6252.49Actin-like protein OS=Neurospora crassa GN=ro-4 PE... [more]
ARPM1_MOUSE6.951e-6249.55Actin-related protein M1 homolog OS=Mus musculus G... [more]
ACTZ_RAT6.951e-6252.25Alpha-centractin OS=Rattus norvegicus GN=Actr1a PE... [more]
ACTZ_MOUSE6.951e-6252.25Alpha-centractin OS=Mus musculus GN=Actr1a PE=2 SV... [more]
ACTZ_MACFA6.951e-6252.25Alpha-centractin OS=Macaca fascicularis GN=ACTR1A ... [more]
ACTZ_HUMAN6.951e-6252.25Alpha-centractin OS=Homo sapiens GN=ACTR1A PE=1 SV... [more]
ACTZ_CANFA6.951e-6252.25Alpha-centractin OS=Canis familiaris GN=ACTR1A PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659349 ID=EY659349; Name=EY659349; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGGGTGATGGTGTCTCTCATACTGTACCAATCTATGAGGGA
TATGCCCTTCCTCATGCCATTCTTCGTTTGGACTTGGCTGGTCGTGATCT
CACTGATGCATTGATGAAGATTCTTACTGAGAGAGGTTACATGTTTACCA
CCACAGCCGAACGGGAAATTGTCCGTGACATGAAGGAGAAGCTTGCTTAT
GTTGCCCTAGACTATGAGCAAGAACTTGAGACTGCCAAGAGCAGCTCATC
TGTTGAGAAGAACTATGAGCTGCCTGATGGCCAGATCATCACCATTGGAG
CTGAAAGATTCCGTTGCCCAGAAGTTCTGTTCCAGCCATCTCTCATCGGA
ATGGAAGCTGCTGGTATTCATGAGACTACCTACAACTCCATCATGAAGTG
TGATGTGGATATTAGAAAGGATCTGTATGGTAACATTGTTCTCAGTGGGG
GTTCAACTATGTTCCCTGGTATTGCCGACCGTATGAGCAAGGAAATCACA
GCACTTGCTCCAAGCAGCATGAAGATCAAGGTCGTGGCTCCACCAGAGAG
AAAATACAGTGTTTGGATTGGAGGATCAATCCTTGCATCCCTCAGCACCT
TCCAGCAGATGTGGATCTCAAAGGGCGAGTATGATGAGTCTGGTCCATCC
ATTGTCCACAGGAAATGCTTCTAAGTTCTTTAAGTGCTTGATGGGTGAGT
TCTTTTTTTCCATTTAGTTGGTTTTTTGTGTCTCGTTTCGCGAACTCAAG
TTGGTTGACATGGAGAAGTGCTAAGGATGGGGCCATTGAANGAGGCATAT
CTCGATATTTGATGTATTATACAGCTTCTTACAGCGTTTGAGGGGGGCTT
TATTCTGTACTCACCATCTTCCNTTGCTTGCATTCATCT
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