EY659349

Overview
NameEY659349
Unique NameEY659349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7281 contig Csv1_Contig7281:583..1472. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACTY_HUMAN (Beta-centractin OS=Homo sapiens GN=ACTR1B PE=1 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 6.951e-62
Identity = 115/222 (51.80%), Postives = 158/222 (71.17%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQE--LETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+H VPIYEG+A+PH+I+R+D+AGRD++  L  +L + G  F T+AE E+VR +KE+  Y++++ +++  LET K        Y LPDG  + +G  RFR PE+LFQP L+G E+ G+HE    +I K D+D+R+ L+ NIVLSGGST+F G  DR+  E+  LAP  +KIK+ AP ER YS WIGGSILASL TF++MW+SK EY+E G   +HRK F
Sbjct:  161 GDGVTHAVPIYEGFAMPHSIMRVDIAGRDVSRYLRLLLRKEGVDFHTSAEFEVVRTIKERACYLSINPQKDEALETEKVQ------YTLPDGSTLDVGPARFRAPELLFQPDLVGDESEGLHEVVAFAIHKSDMDLRRTLFANIVLSGGSTLFKGFGDRLLSEVKKLAPKDIKIKISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGSRAIHRKTF 376          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACTY_MOUSE (Beta-centractin OS=Mus musculus GN=Actr1b PE=1 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 1.186e-61
Identity = 115/222 (51.80%), Postives = 158/222 (71.17%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQE--LETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+H VPIYEG+A+PH+I+R+D+AGRD++  L  +L + G  F T+AE E+VR +KE+  Y++++ +++  LET K        Y LPDG  + +G  RFR PE+LFQP L+G E+ G+HE    +I K D+D+R+ L+ NIVLSGGST+F G  DR+  E+  LAP  +KIK+ AP ER YS WIGGSILASL TF++MW+SK EY+E G   +HRK F
Sbjct:  161 GDGVTHAVPIYEGFAMPHSIMRVDIAGRDVSRYLRLLLRKEGADFHTSAEFEVVRTIKERACYLSINPQKDEALETEKVQ------YTLPDGSTLDVGPARFRAPELLFQPDLVGDESEGLHEVLAFAIHKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIKISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGSRAIHRKTF 376          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACTY_BOVIN (Beta-centractin OS=Bos taurus GN=ACTR1B PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.548e-61
Identity = 114/222 (51.35%), Postives = 158/222 (71.17%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQE--LETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+H VP+YEG+A+PH+I+R+D+AGRD++  L  +L + G  F T+AE E+VR +KE+  Y++++ +++  LET K        Y LPDG  + +G  RFR PE+LFQP LIG E+ G+HE    +I K D+D+R+ L+ NI+LSGGST+F G  DR+  E+  LAP  +KIK+ AP ER YS WIGGSILASL TF++MW+SK EY+E G   +HRK F
Sbjct:  161 GDGVTHAVPVYEGFAMPHSIMRVDIAGRDVSRYLRLLLRKEGADFHTSAEFEVVRTIKERACYLSINPQKDEALETEKVQ------YTLPDGSTLNVGPARFRAPELLFQPDLIGDESEGLHEVLVFAIHKSDMDLRRTLFANIMLSGGSTLFKGFGDRLLSEVKKLAPKDVKIKISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGSRAIHRKTF 376          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACTS_PLEWA (Actin, alpha skeletal muscle (Fragment) OS=Pleurodeles waltlii PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.814e-60
Identity = 108/125 (86.40%), Postives = 118/125 (94.40%), Query Frame = 3
Query:  297 GAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            G ERFRCPE LFQPS IGME+AGIHETTYNSIMKCD+DIRKDLY N V+SGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDE+GPSIVHRKCF
Sbjct:    1 GNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 125          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT27_DICDI (Putative actin-27 OS=Dictyostelium discoideum GN=act27 PE=3 SV=2)

HSP 1 Score: 230.72 bits (587), Expect = 8.497e-60
Identity = 122/217 (56.22%), Postives = 149/217 (68.66%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQP-SLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVH 659
            GD  SH VP+YEG ALPHA   L  AG DLTD +  +L + GY      EREIVRD+KEKL+YV+ D+  E+      S++ K+YELPDGQ+ITI  E F CPEVLF P +  G    GI +  YNSIMKC+ DI  DLYGN+VLSGGSTMFPGI  RM K +T LAPS+ +I + A P+RK SVWIGGSIL  +  FQ++ I K +YDE GPS V+
Sbjct:  146 GDSASHVVPVYEGLALPHATSSLGFAGCDLTDQMSLLLNDLGY----NLEREIVRDIKEKLSYVSSDFSWEIN---DPSTLGKSYELPDGQVITIDKELFACPEVLFLPYAFFGTNLDGIDKAIYNSIMKCNDDIHNDLYGNVVLSGGSTMFPGIEYRMYKGLTQLAPSTTEIVINAEPDRKNSVWIGGSILGLVPNFQELCIDKEDYDEYGPSFVN 355          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACTT2_MOUSE (Actin-related protein T2 OS=Mus musculus GN=Actrt2 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 4.217e-59
Identity = 109/220 (49.55%), Postives = 154/220 (70.00%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+ TVPIYEGY+LPHA+ +L +AG+D+T+ L ++L   G  F    E+ +  D+KEKL YVAL+ E+EL  ++ +  V + Y+LPDG +I IG + ++ PEVLF P  +G    G+ +   NSI KCD DI+K L+G IVLSGGST+F G+ DR+ KE+  LA   + IK+ APP+R +S WIG SI+ SLS+F+QMWI+  ++ E G S+V R+CF
Sbjct:  160 GDGVTCTVPIYEGYSLPHAVSKLYVAGKDITELLTRLLLASGRAFPCPLEKALADDIKEKLCYVALEPEEEL--SRRAEDVLREYKLPDGNVIYIGDQLYQAPEVLFSPDQLGTHGPGLAQMASNSITKCDADIQKTLFGEIVLSGGSTLFQGLDDRLLKELEQLASKGVPIKITAPPDRWFSTWIGASIVTSLSSFKQMWITAADFKEFGVSVVQRRCF 377          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACT28_DICDI (Putative actin-28 OS=Dictyostelium discoideum GN=act28 PE=3 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.357e-57
Identity = 120/212 (56.60%), Postives = 144/212 (67.92%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLI-GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESG 644
            GD  SH VP+YEG ALP A   L  AG DLTD +  +L + GY      EREIVRD+KEKL+YV+ D+  E++      S+EK+YELPDGQ+ITIG E   C E LF P +  G    GI +  YNSIMKCDVDI  DLYGN+VLSGGSTMFPGI  RM KE+T LAPS+ +I + APPERK SVWIGGSIL  +  F ++   K +YDE G
Sbjct:  148 GDSASHVVPVYEGLALPLATSSLGFAGCDLTDQMSLLLNDLGY----NLEREIVRDIKEKLSYVSSDFLWEID----DPSLEKSYELPDGQVITIGKELLACSEGLFLPYVFFGTNLDGIDKAIYNSIMKCDVDIHNDLYGNVVLSGGSTMFPGIEYRMYKELTQLAPSTTEIVINAPPERKNSVWIGGSILGLVPNFPELCFDKEDYDEYG 351          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACTT2_BOVIN (Actin-related protein T2 OS=Bos taurus GN=ACTRT2 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 5.155e-57
Identity = 103/220 (46.82%), Postives = 153/220 (69.55%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+ TVPI+EGY+LPHA+ +L +AGRD+T+ L ++L   G  F+   ++ +V D+KEKL YVAL+ ++EL   +    V + Y+LPDG I+ IG + ++ PE LF P  +G++  G+ +    SI KCD DI+K LYG IVLSGG+T+F G+ DR+ +E+  LA     IK+ APP+R +S WIG SI+ SLS+F+QMW++  ++ E G S++ R+CF
Sbjct:  160 GDGVTCTVPIFEGYSLPHAVTKLYVAGRDITEHLTRLLLASGRTFSCVLDKALVDDIKEKLCYVALEPDKEL--CRRPEEVLREYKLPDGNIVPIGDQLYQAPEALFSPEKLGIQNPGLSKMVSCSITKCDADIQKTLYGEIVLSGGTTLFQGLDDRLLRELEQLASKGTPIKITAPPDRWFSTWIGASIVTSLSSFKQMWVTSADFKEFGTSVIQRRCF 377          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACTT1_HUMAN (Actin-related protein T1 OS=Homo sapiens GN=ACTRT1 PE=2 SV=2)

HSP 1 Score: 220.32 bits (560), Expect = 1.148e-56
Identity = 103/220 (46.82%), Postives = 151/220 (68.64%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+ TVPI+EGY+LPHA+ +L +AGRD+T+ L ++L   G+ F     + +V ++KEKL Y+AL+ E+EL   KS   V   Y LPDG +I  G E ++ PEVLF P  +G+ + G+ +   +SIMKCD DI+  LY +IVLSGG+T+ PG+ +R+ KE+  LA     IK+ A P+R +S WIG SI+ S+S+F+QMW++  ++ E G S+V R+CF
Sbjct:  159 GDGVTCTVPIFEGYSLPHAVTKLCMAGRDITEHLTRLLFASGFNFPCILNKAVVNNIKEKLCYIALEPEKELR--KSRGEVLGAYRLPDGHVIHFGDELYQVPEVLFAPDQLGIHSPGLSKMVSSSIMKCDTDIQNKLYADIVLSGGTTLLPGLEERLMKEVEQLASKGTPIKITASPDRCFSAWIGASIMTSMSSFKQMWVTSADFKEYGTSVVQRRCF 376          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACTT2_MACFA (Actin-related protein T2 OS=Macaca fascicularis GN=ACTRT2 PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.500e-56
Identity = 104/220 (47.27%), Postives = 154/220 (70.00%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+ TVPI+EGY+LPHA+ +L +AGRD+T+ L ++L   G+ F+   ++ +V D+K+KL YVAL+ E+EL  ++    V + Y+LPDG II++G    + PE LF P  +G ++ G+     +SI KCD DI+K L+G IVLSGG+T+F G+ DR+ KE+  LA     IK+ APP+R +S WIG SI+ SLS+F+QMW++  ++ E G S+V R+CF
Sbjct:  160 GDGVTCTVPIFEGYSLPHAVTKLHVAGRDITELLTQLLLASGHTFSCELDKGLVDDIKKKLCYVALEPEKEL--SRRPEEVLREYKLPDGNIISLGDPLCQAPEALFAPQQLGCQSPGLSHMVSSSITKCDADIQKILFGEIVLSGGTTLFHGLDDRLLKELEQLASKDTPIKITAPPDRWFSTWIGASIVTSLSSFKQMWVTAADFKEFGSSVVQRRCF 377          
The following BLAST results are available for this feature:
BLAST of EY659349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 486
Match NameE-valueIdentityDescription
ACTY_HUMAN6.951e-6251.80Beta-centractin OS=Homo sapiens GN=ACTR1B PE=1 SV=... [more]
ACTY_MOUSE1.186e-6151.80Beta-centractin OS=Mus musculus GN=Actr1b PE=1 SV=... [more]
ACTY_BOVIN1.548e-6151.35Beta-centractin OS=Bos taurus GN=ACTR1B PE=2 SV=1[more]
ACTS_PLEWA3.814e-6086.40Actin, alpha skeletal muscle (Fragment) OS=Pleurod... [more]
ACT27_DICDI8.497e-6056.22Putative actin-27 OS=Dictyostelium discoideum GN=a... [more]
ACTT2_MOUSE4.217e-5949.55Actin-related protein T2 OS=Mus musculus GN=Actrt2... [more]
ACT28_DICDI1.357e-5756.60Putative actin-28 OS=Dictyostelium discoideum GN=a... [more]
ACTT2_BOVIN5.155e-5746.82Actin-related protein T2 OS=Bos taurus GN=ACTRT2 P... [more]
ACTT1_HUMAN1.148e-5646.82Actin-related protein T1 OS=Homo sapiens GN=ACTRT1... [more]
ACTT2_MACFA1.500e-5647.27Actin-related protein T2 OS=Macaca fascicularis GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659349 ID=EY659349; Name=EY659349; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGGGTGATGGTGTCTCTCATACTGTACCAATCTATGAGGGA
TATGCCCTTCCTCATGCCATTCTTCGTTTGGACTTGGCTGGTCGTGATCT
CACTGATGCATTGATGAAGATTCTTACTGAGAGAGGTTACATGTTTACCA
CCACAGCCGAACGGGAAATTGTCCGTGACATGAAGGAGAAGCTTGCTTAT
GTTGCCCTAGACTATGAGCAAGAACTTGAGACTGCCAAGAGCAGCTCATC
TGTTGAGAAGAACTATGAGCTGCCTGATGGCCAGATCATCACCATTGGAG
CTGAAAGATTCCGTTGCCCAGAAGTTCTGTTCCAGCCATCTCTCATCGGA
ATGGAAGCTGCTGGTATTCATGAGACTACCTACAACTCCATCATGAAGTG
TGATGTGGATATTAGAAAGGATCTGTATGGTAACATTGTTCTCAGTGGGG
GTTCAACTATGTTCCCTGGTATTGCCGACCGTATGAGCAAGGAAATCACA
GCACTTGCTCCAAGCAGCATGAAGATCAAGGTCGTGGCTCCACCAGAGAG
AAAATACAGTGTTTGGATTGGAGGATCAATCCTTGCATCCCTCAGCACCT
TCCAGCAGATGTGGATCTCAAAGGGCGAGTATGATGAGTCTGGTCCATCC
ATTGTCCACAGGAAATGCTTCTAAGTTCTTTAAGTGCTTGATGGGTGAGT
TCTTTTTTTCCATTTAGTTGGTTTTTTGTGTCTCGTTTCGCGAACTCAAG
TTGGTTGACATGGAGAAGTGCTAAGGATGGGGCCATTGAANGAGGCATAT
CTCGATATTTGATGTATTATACAGCTTCTTACAGCGTTTGAGGGGGGCTT
TATTCTGTACTCACCATCTTCCNTTGCTTGCATTCATCT
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