EY659349

Overview
NameEY659349
Unique NameEY659349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7281 contig Csv1_Contig7281:583..1472. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACTT2_HUMAN (Actin-related protein T2 OS=Homo sapiens GN=ACTRT2 PE=2 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 2.558e-56
Identity = 104/220 (47.27%), Postives = 153/220 (69.55%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GD V+ TVPI+EGY+LPHA+ +L +AGRD+T+ LM++L   G+ F    ++ +V D+K+KL YVAL+ E+EL  ++    V + Y+LPDG II++G    + PE LF P  +G ++ G+     +SI KCD DI+K L+G IVLSGG+T+F G+ DR+ KE+  LA     IK+ APP+R +S WIG SI+ SLS+F+QMW++  ++ E G S+V R+CF
Sbjct:  160 GDAVTCTVPIFEGYSLPHAVTKLHVAGRDITELLMQLLLASGHTFPCQLDKGLVDDIKKKLCYVALEPEKEL--SRRPEEVLREYKLPDGNIISLGDPLHQAPEALFVPQQLGSQSPGLSNMVSSSITKCDTDIQKILFGEIVLSGGTTLFHGLDDRLLKELEQLASKDTPIKITAPPDRWFSTWIGASIVTSLSSFKQMWVTAADFKEFGTSVVQRRCF 377          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACTT1_MACFA (Actin-related protein T1 OS=Macaca fascicularis GN=ACTRT1 PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.443e-56
Identity = 102/220 (46.36%), Postives = 148/220 (67.27%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+  VPI+EGY+LPHA+ +L  AGRD+T+ L ++L   G+ F     + +  ++KEKL Y+AL+ E+EL   KS   V   Y LPDG +I  G E ++ PEVLF P  +G+ + G+ +   +SIMKCD DI+  LY  IVLSGG+T+FPG+ +R+ KE+  LA     IK+ A P+R +S WIG SI+ S+S+F+QMW++  ++ E G S+V R+CF
Sbjct:  158 GDGVTCAVPIFEGYSLPHAVTKLYTAGRDITEHLTQLLFANGFNFPCILNKAVANNIKEKLCYIALEPEKELR--KSRGEVLGAYRLPDGHVIHFGDELYQVPEVLFAPDQLGIHSPGLSKMVSSSIMKCDTDIQNKLYAEIVLSGGTTLFPGLEERLMKEVEQLASKGTPIKITASPDRCFSAWIGASIMTSMSSFKQMWVTSADFKEYGTSVVQRRCF 375          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP2_CAEEL (Actin-related protein 2 OS=Caenorhabditis elegans GN=arx-2 PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 6.301e-55
Identity = 107/224 (47.77%), Postives = 146/224 (65.18%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITAL-----------APSSMKIKVVAPPERKYSVWIGGSILASL--STFQQMWISKGEYDESG 644
            GDGV+H  P+YEG+AL H   RLD+AGRD+T  L+K+L +RGY F  +A+ E VR MKEKL Y+A D EQE   A  ++ + + Y LPDG++I +G ERF  PE+LFQP LI +E AG+ E  +  I   D+D R D Y +IVLSGG+TM+PG+  R+ KE+  L           A    KI++ APP RK+ V++GG++LA+L     Q  W+SK EY+E G
Sbjct:  160 GDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP2_CAEBR (Actin-related protein 2 OS=Caenorhabditis briggsae GN=arx-2 PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 6.301e-55
Identity = 107/224 (47.77%), Postives = 146/224 (65.18%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITAL-----------APSSMKIKVVAPPERKYSVWIGGSILASL--STFQQMWISKGEYDESG 644
            GDGV+H  P+YEG+AL H   RLD+AGRD+T  L+K+L +RGY F  +A+ E VR MKEKL Y+A D EQE   A  ++ + + Y LPDG++I +G ERF  PE+LFQP LI +E AG+ E  +  I   D+D R D Y +IVLSGG+TM+PG+  R+ KE+  L           A    KI++ APP RK+ V++GG++LA+L     Q  W+SK EY+E G
Sbjct:  158 GDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 381          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACTT1_MOUSE (Actin-related protein T1 OS=Mus musculus GN=Actrt1 PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.394e-54
Identity = 103/220 (46.82%), Postives = 146/220 (66.36%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+ TVP+YEGY+LPHAI +L +AGRD+T+ L ++L  +GY F     + +V D+KEKL  V+L Y+   +T K+     + Y LPDG  I +     + PEVLF P  +G+   GI +   NSIM CD DI+++L+  IVLSGG+TMFPG+ DR+ KE+  LA     IK+ A  +R YS WIGGS++ S++TF+QMW++  ++ E G  +V RKCF
Sbjct:  160 GDGVTCTVPVYEGYSLPHAITKLYVAGRDITEHLTRLLLAKGYTFPCILNKAVVDDIKEKLCTVSLGYK---DTEKNCQQFLRKYTLPDGNTIQMSDHLCQVPEVLFTPDHLGIHDLGISKMVCNSIMNCDTDIQENLFAEIVLSGGTTMFPGLQDRLLKELEDLAFEGTPIKITASSDRCYSAWIGGSVMTSMTTFKQMWVTAEDFKEYGAFVVQRKCF 376          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP2_ACACA (Actin-related protein 2 OS=Acanthamoeba castellanii GN=arp2 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 4.084e-54
Identity = 104/232 (44.83%), Postives = 151/232 (65.09%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITAL-----------APSSMKIKVVAPPERKYSVWIGGSILASLSTFQ-QMWISKGEYDESGPSIVHRKCF 671
            GDGV+H VP+YEG++LPH   RL++AGRD+T  L+K+L  RGY+F  TA+ E VR +KEK  YV  D E E   A  ++++ + Y LPDG++I IGAERF  PE +F P+L+  E+ G+ E  ++ I K D+D R + Y +IVLSGGSTM+PG+  R+ KEI  L           +    K ++  PP RK+ V++GG++LA +   +   W++K EY+E GP ++ RKCF
Sbjct:  158 GDGVTHIVPVYEGFSLPHLTRRLNVAGRDVTRYLIKLLLLRGYVFNRTADFETVRQIKEKFCYVGYDLELEKRLALETTTLVEKYTLPDGRVIPIGAERFEAPECMFNPALVDQESVGVGELVFDCINKADIDTRAEFYNHIVLSGGSTMYPGLPSRLEKEIKRLYFERVAKGNKVSMQKFKCRIEDPPRRKHMVFLGGAVLAEIMKDKTAFWMNKSEYEEQGPRVL-RKCF 388          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP2_DICDI (Actin-related protein 2 OS=Dictyostelium discoideum GN=arpB PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.552e-53
Identity = 101/223 (45.29%), Postives = 149/223 (66.82%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITAL-----------APSSMKIKVVAPPERKYSVWIGGSILASLSTFQ-QMWISKGEYDESG 644
            GDGV+H +P+YEGY++PH   RLD+AGRD+T  L+K+L  RGY F  TA+ E +R +KEKL YVA D +QE++ A  ++ + +NY LPDG++I +G ERF+  E LF PSL+ +E  G+HE  ++ I K D D+++  Y +IVLSGGS+M+PG+  R+ KEI +L             +  K ++  PP RK+ V++GG++LA L+  +   WI+K EY E G
Sbjct:  158 GDGVTHIIPVYEGYSIPHLTRRLDVAGRDVTRYLIKLLLLRGYAFNRTADFETIRQIKEKLCYVAYDVQQEMKLASETTVLVENYTLPDGRVIKVGQERFQASEALFNPSLVDVEGGGVHEQLFDCITKADRDLQQGFYQHIVLSGGSSMYPGLPSRLEKEIRSLYLERVLKGNKEGLAKFKCRIEDPPRRKHMVFLGGAVLADLTKDRDDFWITKAEYMEKG 380          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP2_YEAST (Actin-related protein 2 OS=Saccharomyces cerevisiae GN=ARP2 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.647e-53
Identity = 105/225 (46.67%), Postives = 150/225 (66.67%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITAL--------APSSM---KIKVVAPPERKYSVWIGGSILAS-LSTFQQMWISKGEYDESGPS 650
            GDGV+H VP+YE   L H   RLD+AGRD+T  L+ +L+ RGY F  TA+ E VR +KEKL YV+ D + + + A+ ++++ ++YELPDG+ I +G ERF  PE LFQP L+ +E  G+ E  +N++   DVDIR  LY  IVLSGGS+M+PG+  R+ KE+  L         PS +   K+++  PP RK+ V+IGG++LAS ++    MW+SK E+ ESGPS
Sbjct:  159 GDGVTHIVPVYESVVLSHLTRRLDVAGRDVTRHLIDLLSRRGYAFNRTADFETVRQIKEKLCYVSYDLDLDTKLARETTALVESYELPDGRTIKVGQERFEAPECLFQPGLVDVEQPGVGELLFNTVQSADVDIRSSLYKAIVLSGGSSMYPGLPSRLEKELKQLWFSRVLHNDPSRLDKFKVRIEDPPRRKHMVFIGGAVLASIMADKDHMWLSKQEWQESGPS 383          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACTT1_RAT (Actin-related protein T1 OS=Rattus norvegicus GN=Actrt1 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.006e-52
Identity = 103/220 (46.82%), Postives = 145/220 (65.91%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDGV+ TVPIYEGY+LP AI +L +AGRD+T+ L ++L  +GY F     + +V D+KEKL  V+   +   +  + S S    Y+LPDG  I +     + PEVLF P  +G+   GI +   NSIMKCD DI+++L+  IVLSGG+T+FPG+ DR+ KE+  LA     IK+ A P+R YS WIGGS++ SL+TF+QMW++  ++ E G  +V RKCF
Sbjct:  160 GDGVTCTVPIYEGYSLPRAITKLYVAGRDITEHLTRLLLAKGYTFPCILNKAVVDDIKEKLCTVSWGSKDSEKCYQRSLS---EYKLPDGNTIQMSDHLCQVPEVLFTPEHLGIHDLGISKMVCNSIMKCDTDIQENLFAEIVLSGGTTLFPGLQDRLLKELEVLAFEGTPIKITASPDRCYSAWIGGSVMTSLTTFKQMWVTAEDFKEYGAFVVQRKCF 376          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: YGEC_SCHPO (Uncharacterized actin family protein C1347.12 OS=Schizosaccharomyces pombe GN=SPBC1347.12 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.716e-52
Identity = 98/220 (44.55%), Postives = 150/220 (68.18%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            GDG++H+VPIY+G+++P AI + ++ GRD+TD L   L + G+   ++AE+EIVR++KEK  YVA D+  E+E+          Y+LPD Q IT+G E F  PEVLF P ++G EA+G+H   + SI+  D+D+R  LY NIVLSGGST+  G  +R   E+ A++    ++K+ A PER ++ W+GGSILASLSTF+++ I+  EY ++  +++ R+ F
Sbjct:  161 GDGLTHSVPIYDGFSIPSAIQQEEIGGRDVTDYLQLQLRKSGHELVSSAEKEIVREIKEKCCYVASDFRSEIESWTEHKPQIHTYQLPDNQTITLGTECFSAPEVLFNPEMMGSEASGLHIQLFKSILLSDIDLRSTLYSNIVLSGGSTLLRGFGERFISELRAISGKKNQVKIYASPERMHNAWLGGSILASLSTFRRLLITSEEY-KNDQNVIFRRRF 379          
The following BLAST results are available for this feature:
BLAST of EY659349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 486
Match NameE-valueIdentityDescription
ACTT2_HUMAN2.558e-5647.27Actin-related protein T2 OS=Homo sapiens GN=ACTRT2... [more]
ACTT1_MACFA7.443e-5646.36Actin-related protein T1 OS=Macaca fascicularis GN... [more]
ARP2_CAEEL6.301e-5547.77Actin-related protein 2 OS=Caenorhabditis elegans ... [more]
ARP2_CAEBR6.301e-5547.77Actin-related protein 2 OS=Caenorhabditis briggsae... [more]
ACTT1_MOUSE2.394e-5446.82Actin-related protein T1 OS=Mus musculus GN=Actrt1... [more]
ARP2_ACACA4.084e-5444.83Actin-related protein 2 OS=Acanthamoeba castellani... [more]
ARP2_DICDI1.552e-5345.29Actin-related protein 2 OS=Dictyostelium discoideu... [more]
ARP2_YEAST2.647e-5346.67Actin-related protein 2 OS=Saccharomyces cerevisia... [more]
ACTT1_RAT1.006e-5246.82Actin-related protein T1 OS=Rattus norvegicus GN=A... [more]
YGEC_SCHPO1.716e-5244.55Uncharacterized actin family protein C1347.12 OS=S... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659349 ID=EY659349; Name=EY659349; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGGGTGATGGTGTCTCTCATACTGTACCAATCTATGAGGGA
TATGCCCTTCCTCATGCCATTCTTCGTTTGGACTTGGCTGGTCGTGATCT
CACTGATGCATTGATGAAGATTCTTACTGAGAGAGGTTACATGTTTACCA
CCACAGCCGAACGGGAAATTGTCCGTGACATGAAGGAGAAGCTTGCTTAT
GTTGCCCTAGACTATGAGCAAGAACTTGAGACTGCCAAGAGCAGCTCATC
TGTTGAGAAGAACTATGAGCTGCCTGATGGCCAGATCATCACCATTGGAG
CTGAAAGATTCCGTTGCCCAGAAGTTCTGTTCCAGCCATCTCTCATCGGA
ATGGAAGCTGCTGGTATTCATGAGACTACCTACAACTCCATCATGAAGTG
TGATGTGGATATTAGAAAGGATCTGTATGGTAACATTGTTCTCAGTGGGG
GTTCAACTATGTTCCCTGGTATTGCCGACCGTATGAGCAAGGAAATCACA
GCACTTGCTCCAAGCAGCATGAAGATCAAGGTCGTGGCTCCACCAGAGAG
AAAATACAGTGTTTGGATTGGAGGATCAATCCTTGCATCCCTCAGCACCT
TCCAGCAGATGTGGATCTCAAAGGGCGAGTATGATGAGTCTGGTCCATCC
ATTGTCCACAGGAAATGCTTCTAAGTTCTTTAAGTGCTTGATGGGTGAGT
TCTTTTTTTCCATTTAGTTGGTTTTTTGTGTCTCGTTTCGCGAACTCAAG
TTGGTTGACATGGAGAAGTGCTAAGGATGGGGCCATTGAANGAGGCATAT
CTCGATATTTGATGTATTATACAGCTTCTTACAGCGTTTGAGGGGGGCTT
TATTCTGTACTCACCATCTTCCNTTGCTTGCATTCATCT
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