EY659349

Overview
NameEY659349
Unique NameEY659349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7281 contig Csv1_Contig7281:583..1472. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP2B_DANRE (Actin-related protein 2-B OS=Danio rerio GN=actr2b PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.236e-51
Identity = 99/229 (43.23%), Postives = 145/229 (63.32%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITAL-----------APSSMKIKVVAPPERKYSVWIGGSILAS-LSTFQQMWISKGEYDESGPSIVHR 662
            GDGV+H  P+YEG++LPH   RLD+AGRD+T  L+K+L  RGY F  +A+ E VR MKE L YV  + EQE + A  ++ + ++Y LPDG++I +G ERF  PE LFQP LI +E  G+ E  +N+I   D+D R + Y +IVLSGGSTM+PG+  R+ +E+  L             S  KI++  PP RK+ V++GG++LA  +      W+++ EY E G  ++ +
Sbjct:  160 GDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMMKENLCYVGYNIEQEQKLALETTVLVESYTLPDGRVIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRAEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVDKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWLTREEYQEKGVRVLEK 388          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP2_PONAB (Actin-related protein 2 OS=Pongo abelii GN=ACTR2 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.230e-50
Identity = 99/229 (43.23%), Postives = 145/229 (63.32%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITAL-----------APSSMKIKVVAPPERKYSVWIGGSILAS-LSTFQQMWISKGEYDESGPSIVHR 662
            GDGV+H  P+YE ++LPH   RLD+AGRD+T  L+K+L  RGY F  +A+ E VR +KEKL YV  + EQE + A  ++ + ++Y LPDG+II +G ERF  PE LFQP LI +E  G+ E  +N+I   D+D R + Y +IVLSGGSTM+PG+  R+ +E+  L             S  KI++  PP RK+ V++GG++LA  +      W+++ EY E G  ++ +
Sbjct:  160 GDGVTHICPVYEDFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK 388          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP2_SCHPO (Actin-related protein 2 OS=Schizosaccharomyces pombe GN=arp2 PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.606e-50
Identity = 100/223 (44.84%), Postives = 146/223 (65.47%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITAL-----------APSSMKIKVVAPPERKYSVWIGGSILAS-LSTFQQMWISKGEYDESG 644
            GDGV+H VP+YE   L H + RLD+AGRD T  L+ +L  +GY F  TA+ E VR+MKEKL YV+ D E + + ++ ++ + +NY LPDG++I +G+ER+ CPE LFQP L+G E  G+ E  +++I   DVDIRK LY  IVLSGGS+M+ G+  R+ KEI  L              + K+K+   P R+++V+IGG++LA  ++    MW+SK E++E G
Sbjct:  156 GDGVTHIVPVYESVVLNHLVGRLDVAGRDATRYLISLLLRKGYAFNRTADFETVREMKEKLCYVSYDLELDHKLSEETTVLMRNYTLPDGRVIKVGSERYECPECLFQPHLVGSEQPGLSEFIFDTIQAADVDIRKYLYRAIVLSGGSSMYAGLPSRLEKEIKQLWFERVLHGDPARLPNFKVKIEDAPRRRHAVFIGGAVLADIMAQNDHMWVSKAEWEEYG 378          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACL7A_BOVIN (Actin-like protein 7A OS=Bos taurus GN=ACTL7A PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 4.374e-48
Identity = 100/220 (45.45%), Postives = 139/220 (63.18%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            G GVS+ VPIYEGY LP    RLD AG DLT  LM ++   G  FT   +  IV D+K+K  +VALD  +E +   +   ++  Y LPDGQ I +  ERF C E+ F+PSLI     G+H  T + + KCD+ +++DL GNI+L GGSTM  G  +R+ KE++++ P+    +V   PER  +VW GGSILASL  FQ +W+ + EY+E GP  ++R+CF
Sbjct:  223 GHGVSYVVPIYEGYPLPSITGRLDYAGSDLTTYLMCLMNTAGKHFTE-GQLGIVEDIKKKCCFVALDPIEEKKVPATEHMIQ--YTLPDGQAIYLCQERFLCSEMFFKPSLIKSMQLGLHTQTVSCLNKCDIALKRDLMGNILLCGGSTMLSGFPNRLQKELSSMCPNDTP-QVSVLPERDTAVWTGGSILASLQGFQPLWVHRSEYEEHGPFFLYRRCF 438          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP1_YEAST (Centractin OS=Saccharomyces cerevisiae GN=ARP1 PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 7.461e-48
Identity = 92/216 (42.59%), Postives = 142/216 (65.74%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALM-KILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELET-AKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSI 653
            G+G   TVPIY+G+ALP +++R+D+ G D+T+ L  ++    G    +++EREIVR MKEK+ Y+A + ++E E   + +  +   ++LPDG+ I +G +R+R PE+LF P +IG+   G+ +    SI K D+D+RK L  +I+LSGG+T   G  DRM  ++ AL   + KIK++AP ERKY+ WIGGSIL  LSTFQ++W  K ++ E    +
Sbjct:  164 GEGYCSTVPIYDGFALPASMMRMDIGGADITEQLQFQLRKSAGVSLFSSSEREIVRTMKEKVCYLAKNIKKEEEKYLQGTQDLISTFKLPDGRCIEVGNDRYRAPEILFSPQIIGLGYDGLSDMCMQSIWKVDLDLRKPLLSSIILSGGTTTLKGFGDRMLWDLEALTKGTSKIKIIAPSERKYTTWIGGSILTGLSTFQRLWTKKSDWLEDSTRV 379          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACL7A_RAT (Actin-like protein 7A OS=Rattus norvegicus GN=Actl7a PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 9.744e-48
Identity = 100/220 (45.45%), Postives = 139/220 (63.18%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            G GVS+ VPIYEGY LP    RLD AG DLT+ LM ++   G  F+      IV D+K K  +VALD  +E +   S   +  +Y LPDG+ I +G ERF C E+ F+PSLI     G+H  T + + KCD+ +++DL GNI+L GGSTM  G  +R+ KE++++ P+    +V   PER  +VW GGSILASL  FQ +W+ + EY+E GP  ++R+CF
Sbjct:  225 GHGVSYVVPIYEGYPLPSITGRLDYAGSDLTNYLMNLMNNCGKHFSED-HLSIVEDIKTKCCFVALDPIEEKKIPPSEHEI--HYTLPDGKEIRLGQERFLCSEMFFKPSLIKSMQLGLHTQTVSCLNKCDIALKRDLMGNILLCGGSTMLRGFPNRLQKELSSMCPNDTP-QVNVLPERDTAVWTGGSILASLQGFQPLWVHRLEYEEHGPFFLYRRCF 440          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP2_ARATH (Actin-related protein 2 OS=Arabidopsis thaliana GN=ARP2 PE=1 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 2.171e-47
Identity = 92/229 (40.17%), Postives = 148/229 (64.63%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEI------TALAPS-----SMKIKVVAPPERKYSVWIGGSILAS-LSTFQQMWISKGEYDESGPSIVHR 662
            GDGV+H VP+ +GY+ PH   R+++AGR +T  L+ +L+ RGY    TA+ E VR++KEKL Y++ DY++E +    ++ + KNY LPDG++I +G ERF+ PE LF P LI +E  G+ +  +  I + D+D R  LY +IVLSGGSTM+PG+  R+ KEI      T L  +      +++++  PP RK+ V++GG++LA  +    + WI++ +Y E G + +++
Sbjct:  157 GDGVTHVVPVVDGYSFPHLTKRMNVAGRHITAYLVDLLSRRGYAMNKTADFETVREIKEKLCYISYDYKRESQLGLETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAGIMKDAPEFWINREDYMEEGINCLNK 385          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACL7A_MACFA (Actin-like protein 7A OS=Macaca fascicularis GN=ACTL7A PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.835e-47
Identity = 100/220 (45.45%), Postives = 138/220 (62.73%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            G GVS+ VPIYEGY LP    RLD AG DLT  L+ +L   G  FT   +  IV D+K+K  +VALD  +E     S  ++   Y LPDG+ I +  ERF C E+ F+PSLI     G+H  T + + KCD+ +++DL GNI+L GGSTM  G  +R+ KE++++ P+    +V   PER  +VW GGSILASL  FQ +W+ + EY+E GP  ++R+CF
Sbjct:  220 GHGVSYVVPIYEGYPLPSITGRLDYAGSDLTAYLLGLLNSAGNEFTQD-QMGIVEDIKKKCCFVALDPTEEKRVPLSEHTIR--YVLPDGKEIQLCQERFLCSEMFFKPSLIKSMQLGLHTQTVSCLNKCDIALKRDLMGNILLCGGSTMLSGFPNRLQKELSSMCPNDTP-QVNVLPERDSAVWTGGSILASLQGFQPLWVHRFEYEEHGPFFLYRRCF 435          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACL7A_HUMAN (Actin-like protein 7A OS=Homo sapiens GN=ACTL7A PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.703e-47
Identity = 100/220 (45.45%), Postives = 139/220 (63.18%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 671
            G GVS+ VPIYEGY LP    RLD AG DLT  L+ +L   G  FT   +  IV D+K+K  +VALD  +E +   S  ++   Y LPDG+ I +  ERF C E+ F+PSLI     G+H  T + + KCD+ +++DL GNI+L GGSTM  G  +R+ KE++++ P+    +V   PER  +VW GGSILASL  FQ +W+ + EY+E GP  ++R+CF
Sbjct:  220 GHGVSYVVPIYEGYPLPSITGRLDYAGSDLTAYLLGLLNSAGNEFTQD-QMGIVEDIKKKCCFVALDPIEEKKVPLSEHTIR--YVLPDGKEIQLCQERFLCSEMFFKPSLIKSMQLGLHTQTVSCLNKCDIALKRDLMGNILLCGGSTMLSGFPNRLQKELSSMCPNDTP-QVNVLPERDSAVWTGGSILASLQGFQPLWVHRFEYEEHGPFFLYRRCF 435          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ACL7B_HUMAN (Actin-like protein 7B OS=Homo sapiens GN=ACTL7B PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.407e-46
Identity = 102/220 (46.36%), Postives = 133/220 (60.45%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKC-DVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKC 668
            G GVSH VPI EG  LP    R D AG DLT+ LM++L E G+ FT      I+  +K+K  Y A   E+EL        V+  YELPDG++ITIG ERFRC E+LFQPSL G    G+ E T   + +C D   ++++  N++L GG TM  G  +R  +E++ L P      V A PERK SVW GGSILASL  FQQ+W+SK E++E G   ++ KC
Sbjct:  200 GHGVSHVVPISEGDVLPGLTSRADYAGGDLTNYLMQLLNEAGHAFTDD-HLHIIEHIKKKCCYAAFLPEEELGLVPEELRVD--YELPDGKLITIGQERFRCSEMLFQPSLAGSTQPGLPELTAACLGRCQDTGFKEEMAANVLLCGGCTMLDGFPERFQRELSLLCPGDSPA-VAAAPERKTSVWTGGSILASLQAFQQLWVSKEEFEERGSVAIYSKC 415          
The following BLAST results are available for this feature:
BLAST of EY659349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 486
Match NameE-valueIdentityDescription
ARP2B_DANRE3.236e-5143.23Actin-related protein 2-B OS=Danio rerio GN=actr2b... [more]
ARP2_PONAB1.230e-5043.23Actin-related protein 2 OS=Pongo abelii GN=ACTR2 P... [more]
ARP2_SCHPO1.606e-5044.84Actin-related protein 2 OS=Schizosaccharomyces pom... [more]
ACL7A_BOVIN4.374e-4845.45Actin-like protein 7A OS=Bos taurus GN=ACTL7A PE=2... [more]
ARP1_YEAST7.461e-4842.59Centractin OS=Saccharomyces cerevisiae GN=ARP1 PE=... [more]
ACL7A_RAT9.744e-4845.45Actin-like protein 7A OS=Rattus norvegicus GN=Actl... [more]
ARP2_ARATH2.171e-4740.17Actin-related protein 2 OS=Arabidopsis thaliana GN... [more]
ACL7A_MACFA2.835e-4745.45Actin-like protein 7A OS=Macaca fascicularis GN=AC... [more]
ACL7A_HUMAN3.703e-4745.45Actin-like protein 7A OS=Homo sapiens GN=ACTL7A PE... [more]
ACL7B_HUMAN1.407e-4646.36Actin-like protein 7B OS=Homo sapiens GN=ACTL7B PE... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659349 ID=EY659349; Name=EY659349; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGGGTGATGGTGTCTCTCATACTGTACCAATCTATGAGGGA
TATGCCCTTCCTCATGCCATTCTTCGTTTGGACTTGGCTGGTCGTGATCT
CACTGATGCATTGATGAAGATTCTTACTGAGAGAGGTTACATGTTTACCA
CCACAGCCGAACGGGAAATTGTCCGTGACATGAAGGAGAAGCTTGCTTAT
GTTGCCCTAGACTATGAGCAAGAACTTGAGACTGCCAAGAGCAGCTCATC
TGTTGAGAAGAACTATGAGCTGCCTGATGGCCAGATCATCACCATTGGAG
CTGAAAGATTCCGTTGCCCAGAAGTTCTGTTCCAGCCATCTCTCATCGGA
ATGGAAGCTGCTGGTATTCATGAGACTACCTACAACTCCATCATGAAGTG
TGATGTGGATATTAGAAAGGATCTGTATGGTAACATTGTTCTCAGTGGGG
GTTCAACTATGTTCCCTGGTATTGCCGACCGTATGAGCAAGGAAATCACA
GCACTTGCTCCAAGCAGCATGAAGATCAAGGTCGTGGCTCCACCAGAGAG
AAAATACAGTGTTTGGATTGGAGGATCAATCCTTGCATCCCTCAGCACCT
TCCAGCAGATGTGGATCTCAAAGGGCGAGTATGATGAGTCTGGTCCATCC
ATTGTCCACAGGAAATGCTTCTAAGTTCTTTAAGTGCTTGATGGGTGAGT
TCTTTTTTTCCATTTAGTTGGTTTTTTGTGTCTCGTTTCGCGAACTCAAG
TTGGTTGACATGGAGAAGTGCTAAGGATGGGGCCATTGAANGAGGCATAT
CTCGATATTTGATGTATTATACAGCTTCTTACAGCGTTTGAGGGGGGCTT
TATTCTGTACTCACCATCTTCCNTTGCTTGCATTCATCT
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