EY705315

Overview
NameEY705315
Unique NameEY705315
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY705315 vs. ExPASy Swiss-Prot
Match: API2_SOLTU (Aspartic protease inhibitor 2 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.965e-11
Identity = 58/195 (29.74%), Postives = 96/195 (49.23%), Query Frame = 1 
Query:   61 TQPLLGISSNS---EPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLPYDNYKIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDS----YDDPLIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSC--PRRCNKIGVSTKDGVRRLLLVGDH 603
            +Q L+ + S S   +PVLD  G ++     Y++I +  GA G   +LG    ++G CP  V + +S     G  +R +P      +     +N++F +  +VK C    +WKV +    +   L+ TGG+ G   +    ++FKI K  NF Y  +Y  +  P +C  C     C K+GV  ++G RRL LV ++
Sbjct:   24 SQNLIDLPSESPLPKPVLDTNGKELNPNSSYRIISIGRGALGGDVYLGKSPNSDGPCPDGVFRYNSDVGPSGTFVRFIPLSGG--IFEDQLLNIQFNI-ATVKLCVSYTIWKVGNLNAYFRTMLLETGGTIGQADS----SYFKIVKLSNFGYNLLYCPITPPFLCPFCRDDNFCAKVGVVIQNGKRRLALVNEN 211
The following BLAST results are available for this feature:
BLAST of EY705315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
API2_SOLTU3.965e-1129.74Aspartic protease inhibitor 2 OS=Solanum tuberosum... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-042-B12-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY705315 ID=EY705315; Name=EY705315; organism=Citrus sinensis; type=EST; length=846bp
CCACGCGTCCGGAAGACTTCATTGACAACAACACTCTCCTTCCTTATCCT
TACCTTGGCCACGCAGCCTCTATTGGGCATCTCATCAAACTCTGAACCTG
TCTTAGATATCATTGGCAACAAGGTCAAATCCACCCTCGAGTATAAACTT
ATCCCAGTCCTAGATGGCGCCGGTGGATTCAGCACACACCTAGGCACAAA
TGGACAGTGTCCCTTGGACGTTATCCAATTAAGTTCTCCTAGCGAAAGGG
GAGATAATTTAAGATTACTTCCGTACGACAATTACAAAATTGTCAAGGTA
TCCACTGATGTCAACCTGAGATTCCCCGTAAAAGTTTCTGTTAAGCCCTG
TAATGAAGAACCATTGTGGAAAGTTGATAGCTATGACGATCCATTAATTG
TAACCGGCGGAAGTGAGGGCCACCCAGGAGCTGAAACGTTGCTAAATTGG
TTTAAGATTGAGAAAGCTGGAAATTTTTCATATGGTGGTGTATACAATAT
TGTCCATTGTCCGAGTGTCTGTCTATCTTGTCCTAGACGCTGCAACAAAA
TTGGCGTTTCAACTAAGGATGGCGTTCGACGTCTGCTTCTAGTTGGTGAT
CATGAACCGGCTTTGAATGGGTCTGTTTTTCCATCAGAGGAAAGCTNCAG
GCTACTTNCAGCTGCTAACGCAATATCAAGGGTTTTTGAAGCTGCTGAAG
CATATCAATGACCGCGTAATGAATGAACTTAGCTGTATCATTCTAAATAA
TAGACCAGGCTAGTAACCTTTTATCTCTATTACAGAAATAAAATAACAAC
GCCTGTGATCCTTTTGCTGTTGGTAAAAAAAAAAAAAAAAAGGCCG
back to top