EY659336

Overview
NameEY659336
Unique NameEY659336
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7277 contig Csv1_Contig7277:52..855. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659336 vs. ExPASy Swiss-Prot
Match: GL84_ORYSJ (Germin-like protein 8-4 OS=Oryza sativa subsp. japonica GN=GER1 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.368e-26
Identity = 64/164 (39.02%), Postives = 97/164 (59.15%), Query Frame = 1
Query:   52 VNDFCVADLKLSPSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGAD-GALGFVSFNSPNPGLQITDFALFAN 537
            + DFCVAD+K      G+PC  P  V +DDF  +    +  +T + + + VT   V  FP +N LG+SLAR+D A  GV P H HP A+E+L V+ G +  GF++S+ N ++ K + KGD  +FP+ ++HFQ+N   +  A+   S NS NPG+     A+F +
Sbjct:   29 LQDFCVADMKSPVRVNGFPCKNPMEVNSDDFFNAAKFDMPRSTMNKVGSNVTNLNVLNFPGLNTLGISLARIDYAPLGVNPPHIHPRATELLTVLEGTLYVGFVTSNPNRLFSKVVHKGDTFVFPKAMIHFQMNLDHNKPAVAQSSLNSQNPGVITIASAVFGS 192          
BLAST of EY659336 vs. ExPASy Swiss-Prot
Match: GL88_ORYSJ (Germin-like protein 8-8 OS=Oryza sativa subsp. japonica GN=Os08g0189700 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.093e-26
Identity = 68/188 (36.17%), Postives = 106/188 (56.38%), Query Frame = 1
Query:   52 VNDFCVADLKLSPSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLK 603
            + DFCVAD        G+ C+ P  VTAD F  + +      T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  NT++ K L KGD+ +FP+GL+HFQ N      A+   + +S NPG      A+F +   +S +++ +   ++  T+  L+
Sbjct:   28 LQDFCVADKHSPVLVNGFACLDPKYVTADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDKVLAKAFQVEKGTIDWLQ 215          
BLAST of EY659336 vs. ExPASy Swiss-Prot
Match: GL18_ARATH (Germin-like protein subfamily 1 member 8 OS=Arabidopsis thaliana GN=GLP9 PE=2 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 3.093e-26
Identity = 67/160 (41.88%), Postives = 90/160 (56.25%), Query Frame = 1
Query:   52 VNDFCVADLKLSPSPA------GYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSS--ANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGL 507
            + DFCV       +PA      G  C  P +V ADDF FS L   GNT + + + VT   V     +N LG+SL R+D A  G  P HTHP A+EIL+V  G +  GFISS+   N ++ KTL  GD+ +FP+GL+HFQ N G   A+   + +S N G+
Sbjct:   30 LQDFCVG----VNTPADGVFVNGKFCKDPRIVFADDFFFSSLNRPGNTNNAVGSNVTTVNVNNLGGLNTLGISLVRIDYAPNGQNPPHTHPRATEILVVQQGTLLVGFISSNQDGNRLFAKTLNVGDVFVFPEGLIHFQFNLGGTPAVAIAALSSQNAGV 185          
BLAST of EY659336 vs. ExPASy Swiss-Prot
Match: GL85_ORYSJ (Germin-like protein 8-5 OS=Oryza sativa subsp. japonica GN=Os08g0189400 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.275e-26
Identity = 68/188 (36.17%), Postives = 105/188 (55.85%), Query Frame = 1
Query:   52 VNDFCVADLKLSPSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLK 603
            + DFCVAD+       G+ C+ P  V AD F  +        T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  NT++ K L KGD+ +FPQGL+HFQ N      A+   + +S NPG      A+F +   +S +++ +   ++  T+  L+
Sbjct:   28 LQDFCVADMHSPVRVNGFACLNPMEVNADHFFKAAKLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPQGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDEVLAKAFQVEKGTIDWLQ 215          
BLAST of EY659336 vs. ExPASy Swiss-Prot
Match: GL810_ORYSJ (Germin-like protein 8-10 OS=Oryza sativa subsp. japonica GN=GLP2 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 6.890e-26
Identity = 64/164 (39.02%), Postives = 94/164 (57.32%), Query Frame = 1
Query:   52 VNDFCVADLKLSPSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSFNSPNPGLQITDFALFAN 537
            + DFCVAD+       G+ C+ P  V AD F  + +      T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  NT++ K L KGD+ +FP+GL+HFQ N      A+   + +S NPG      A+F +
Sbjct:   28 LQDFCVADMHSPVLVNGFACLDPKYVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGS 191          
BLAST of EY659336 vs. ExPASy Swiss-Prot
Match: GL89_ORYSJ (Germin-like protein 8-9 OS=Oryza sativa subsp. japonica GN=Os08g0189850 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 8.998e-26
Identity = 65/164 (39.63%), Postives = 94/164 (57.32%), Query Frame = 1
Query:   52 VNDFCVADLKLSPSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSFNSPNPGLQITDFALFAN 537
            + DFCVAD        G+ C+ P  VTAD F  + +      T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  NT++ K L KGD+ +FP GL+HFQ N      A+   + +S NPG+     A+F +
Sbjct:   28 LQDFCVADKHSPVLVNGFACLDPKYVTADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLHVGFVTSNPNNTLFSKVLNKGDVFVFPVGLIHFQFNPNPHQPAVAIAALSSQNPGVITIANAVFGS 191          
BLAST of EY659336 vs. ExPASy Swiss-Prot
Match: GL87_ORYSJ (Germin-like protein 8-7 OS=Oryza sativa subsp. japonica GN=GER6 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.175e-25
Identity = 67/188 (35.64%), Postives = 104/188 (55.32%), Query Frame = 1
Query:   52 VNDFCVADLKLSPSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLK 603
            + DFCVAD        G+ C+ P  V AD F  + +      T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  NT++ K L KGD+ +FP+GL+HFQ N      A+   + +S NPG      A+F +   +S  ++ +   ++  T+  L+
Sbjct:   29 LQDFCVADKHSPVLVNGFACLDPKYVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVALAALSSQNPGAITIANAVFGSKPPISDDILAKAFQVEKGTIDWLQ 216          
BLAST of EY659336 vs. ExPASy Swiss-Prot
Match: GL86_ORYSJ (Germin-like protein 8-6 OS=Oryza sativa subsp. japonica GN=Os08g0189500 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.175e-25
Identity = 68/188 (36.17%), Postives = 105/188 (55.85%), Query Frame = 1
Query:   52 VNDFCVADLKLSPSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLK 603
            + DFCVAD        G+ C+ P  V AD F  + +      T+ + + VT   V Q P +N LG+S+AR+D A  G  P HTHP A+EIL V+ G +  GF++S+  NT++ K LKKGD+ +FP GL+HFQ N      A+   + +S NPG      A+F +   +S +++ +   ++  T+  L+
Sbjct:   29 LQDFCVADEHSPVLVNGFACLDPKHVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLKKGDVFVFPVGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDEVLAKAFQVEKGTIDWLQ 216          
BLAST of EY659336 vs. ExPASy Swiss-Prot
Match: GL82_ORYSJ (Germin-like protein 8-2 OS=Oryza sativa subsp. japonica GN=GER3 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.535e-25
Identity = 66/166 (39.76%), Postives = 95/166 (57.23%), Query Frame = 1
Query:   52 VNDFCVADLKLSPSPAGYPCVPPAMVTADDFVFSG-LGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSA-NTVYVKTLKKGDIMIFPQGLLHFQVNSGA-DGALGFVSFNSPNPGLQITDFALFANN 540
            + DFCVADL       G+ C  P   +ADDF  +  L    +T + + + VT   V Q P +N LG+S+ARLD A  G+ P HTHP A+EI  V+ G +  GF++S+  N +  K L KGD+ +FP+GL+HFQ N      A+   + +S NPG+     A+F +N
Sbjct:   30 LQDFCVADLNSPVRVNGFVCKNPMNASADDFFKAAMLDKPRDTNNKVGSNVTLVNVLQLPGLNTLGISIARLDFAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTSNPDNRLLSKVLNKGDVFVFPEGLIHFQFNPNPHKPAVAIAALSSQNPGVITIANAVFGSN 195          
BLAST of EY659336 vs. ExPASy Swiss-Prot
Match: GL13_ARATH (Germin-like protein subfamily 1 member 3 OS=Arabidopsis thaliana GN=At3g04170 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.535e-25
Identity = 70/191 (36.65%), Postives = 105/191 (54.97%), Query Frame = 1
Query:   52 VNDFCVA-DLKLSPSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSS--ANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANN--LSSQLVEQTTFLDDATVKRLKGI 609
            + D+CVA   K      G  C  P +VT+DDF  SGL + GNT   + + V PA +   P +N LG+ +AR+D A GG+IP H HP ASEI+LV+ G +  GF+SS+    T++ K L  GD+ + P GL+ F  N G   A+   +  S NPG      A+F +   +  +++ +   LD   V+ L+ +
Sbjct:   30 LQDYCVAVPEKNGVFVNGEFCKDPKLVTSDDFFASGLNIPGNTNKRLGSFVNPANI---PGLNTLGVGIARIDFAPGGLIPPHIHPRASEIILVIKGKLLVGFVSSNDYNYTLFSKILYPGDVFVHPIGLVQFHANIGKTNAVAIGAVGSQNPGYISVGDAVFGSKPPIDPKILAKAFALDINIVRYLRKV 217          
The following BLAST results are available for this feature:
BLAST of EY659336 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
GL84_ORYSJ2.368e-2639.02Germin-like protein 8-4 OS=Oryza sativa subsp. jap... [more]
GL88_ORYSJ3.093e-2636.17Germin-like protein 8-8 OS=Oryza sativa subsp. jap... [more]
GL18_ARATH3.093e-2641.88Germin-like protein subfamily 1 member 8 OS=Arabid... [more]
GL85_ORYSJ5.275e-2636.17Germin-like protein 8-5 OS=Oryza sativa subsp. jap... [more]
GL810_ORYSJ6.890e-2639.02Germin-like protein 8-10 OS=Oryza sativa subsp. ja... [more]
GL89_ORYSJ8.998e-2639.63Germin-like protein 8-9 OS=Oryza sativa subsp. jap... [more]
GL87_ORYSJ1.175e-2535.64Germin-like protein 8-7 OS=Oryza sativa subsp. jap... [more]
GL86_ORYSJ1.175e-2536.17Germin-like protein 8-6 OS=Oryza sativa subsp. jap... [more]
GL82_ORYSJ1.535e-2539.76Germin-like protein 8-2 OS=Oryza sativa subsp. jap... [more]
GL13_ARATH1.535e-2536.65Germin-like protein subfamily 1 member 3 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-A08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659336 ID=EY659336; Name=EY659336; organism=Citrus sinensis; type=EST; length=804bp
TTTCTTATACGCCGCGTCCGCTTGCTTTTTCTCCTCTTCCTCCATGCTAT
GGTTAACGACTTCTGCGTCGCTGACCTAAAGTTGTCGCCTAGTCCCGCCG
GCTATCCTTGCGTGCCCCCTGCTATGGTTACCGCTGACGACTTCGTATTT
TCGGGCCTCGGCGTGGCCGGAAACACCACGAGTATTATCAACGCGGCAGT
GACACCTGCATTTGTAGCTCAATTTCCGGCCGTGAATGGCCTCGGACTCT
CCTTGGCACGCCTAGATCTTGCAAAGGGTGGCGTAATCCCAATGCACACT
CATCCAGCTGCTTCCGAAATCCTTCTTGTTGTGCATGGCTGCATAACTGC
CGGGTTCATTTCCTCTTCAGCTAACACTGTTTACGTAAAGACGCTTAAGA
AGGGAGATATCATGATCTTTCCACAAGGGTTGTTGCATTTTCAAGTAAAT
TCCGGCGCGGACGGAGCCCTCGGTTTTGTTAGCTTCAACAGCCCGAATCC
TGGACTCCAAATCACCGATTTCGCCTTATTTGCCAACAACTTGTCTTCCC
AATTGGTGGAGCAGACCACTTTCCTTGACGATGCTACGGTGAAGAGGCTC
AAGGGTATCCTTGGTGGCACCGGCTAGGCTTATTAGTTACCACATTCTTC
ATTTGTAGTTTTGAGTTCTTAATTTCATTTAGTTGCTAATGTATTTGATT
GTTGGAATTCACGAGTTAGTATTTTCTCTGTTCTCACTTCCCCTATCTTT
TCTTCTGAATAAATAAAATTCTCTCATTAAAAAAAAAAAAAAAAAAAAAA
AAAA
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