EY705313

Overview
NameEY705313
Unique NameEY705313
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_PROM9 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9312) GN=ndk PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 4.027e-32
Identity = 49/77 (63.64%), Postives = 61/77 (79.22%), Query Frame = 1 
Query:  415 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP--SLPWYGK 639
            ERTFIAIKPDGVQRG +SEII RFE+KGFKLV +K ++PSK+ AQ HY   +ERPFF  L +F+SSGP  ++ W G+
Sbjct:    4 ERTFIAIKPDGVQRGYVSEIIGRFEKKGFKLVGLKQLIPSKDLAQNHYGVHRERPFFGDLVDFISSGPVVAMVWEGE 80

HSP 2 Score: 57.3806 bits (137), Expect = 4.027e-32
Identity = 30/52 (57.69%), Postives = 34/52 (65.38%), Query Frame = 3 
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMGVMARD 773
            V+AMVWEGE  I   RKLIGAT P ++EPG IRGDLA  + RN   G    D
Sbjct:   72 VVAMVWEGEGVILSARKLIGATKPLEAEPGTIRGDLAIDIGRNIIHGSDGED 123
[Close]
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_SYNPW (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain WH7803) GN=ndk PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 5.244e-32
Identity = 50/76 (65.79%), Postives = 61/76 (80.26%), Query Frame = 1 
Query:  415 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP--SLPWYG 636
            ERTFIAIKPDGVQRGLI EI+ RFERKGFKLV +K + PS+E A++HY   KERPFF GL +F++SGP  ++ W G
Sbjct:    4 ERTFIAIKPDGVQRGLIGEILGRFERKGFKLVGLKQLTPSRELAEQHYGVHKERPFFAGLVDFITSGPVVAMVWEG 79

HSP 2 Score: 56.225 bits (134), Expect = 5.244e-32
Identity = 28/47 (59.57%), Postives = 33/47 (70.21%), Query Frame = 3 
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMG 758
            V+AMVWEG+  I   RKLIGAT P ++EPG IRGDLA  + RN   G
Sbjct:   72 VVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAINIGRNVIHG 118
[Close]
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_PROMM (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=ndk PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.465e-32
Identity = 48/77 (62.34%), Postives = 61/77 (79.22%), Query Frame = 1 
Query:  412 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP--SLPWYG 636
            MERTF+AIKPDGVQRGL+ EI+ RFERKGFKLV +K V PS++ A +HY   +ERPFF GL +F++SGP  ++ W G
Sbjct:    3 MERTFVAIKPDGVQRGLVGEILGRFERKGFKLVGLKQVTPSRDLAGEHYGVHRERPFFAGLVDFITSGPVIAMVWEG 79

HSP 2 Score: 56.225 bits (134), Expect = 6.465e-32
Identity = 29/47 (61.70%), Postives = 32/47 (68.09%), Query Frame = 3 
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMG 758
            VIAMVWEG+  I   RKLIGAT P  +EPG IRGDLA  + RN   G
Sbjct:   72 VIAMVWEGDGVIASARKLIGATKPLDAEPGTIRGDLAVNIGRNVIHG 118

HSP 3 Score: 21.557 bits (44), Expect = 6.465e-32
Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 2 
Query:  740 KKLIHGSDGP 769
            + +IHGSDGP
Sbjct:  113 RNVIHGSDGP 122
[Close]
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_PROM2 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9215) GN=ndk PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.895e-32
Identity = 48/77 (62.34%), Postives = 61/77 (79.22%), Query Frame = 1 
Query:  415 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP--SLPWYGK 639
            ERTFIAIKPDGVQRG ++EII RFE+KGFKLV +K ++PSK+ AQ HY   +ERPFF  L +F+SSGP  ++ W G+
Sbjct:    4 ERTFIAIKPDGVQRGYVAEIIGRFEKKGFKLVGLKQLIPSKDLAQNHYGVHRERPFFGDLVDFISSGPVVAMVWEGE 80

HSP 2 Score: 57.3806 bits (137), Expect = 8.895e-32
Identity = 30/52 (57.69%), Postives = 34/52 (65.38%), Query Frame = 3 
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMGVMARD 773
            V+AMVWEGE  I   RKLIGAT P ++EPG IRGDLA  + RN   G    D
Sbjct:   72 VVAMVWEGEGVILSARKLIGATKPLEAEPGTIRGDLAIDIGRNIIHGSDGED 123
[Close]
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_PROM3 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9303) GN=ndk PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.158e-31
Identity = 47/77 (61.04%), Postives = 61/77 (79.22%), Query Frame = 1 
Query:  412 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP--SLPWYG 636
            +ERTF+AIKPDGVQRGL+ EI+ RFERKGFKLV +K + PS+E A +HY   +ERPFF GL +F++SGP  ++ W G
Sbjct:    3 VERTFVAIKPDGVQRGLVGEILGRFERKGFKLVGLKQLAPSRELAGEHYGVHRERPFFAGLVDFITSGPVVAMVWEG 79

HSP 2 Score: 58.151 bits (139), Expect = 1.158e-31
Identity = 33/65 (50.77%), Postives = 40/65 (61.54%), Query Frame = 3 
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMGVMARDRKD-EINCGSNPK 809
            V+AMVWEG+  I   RKLIGAT P ++EPG IRGDLA  + RN   G    D    EIN   +P+
Sbjct:   72 VVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDGPDTAQFEINLWFSPE 136
[Close]
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_HELAN (Nucleoside diphosphate kinase OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.159e-31
Identity = 46/78 (58.97%), Postives = 59/78 (75.64%), Query Frame = 1 
Query:  412 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP--SLPWYGK 639
            ME+TFI IKPDGVQRGL+ EII RFE+KGF L  +K++   + FA+KHY DL  +PFFNGL E++ SGP  ++ W GK
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIIGRFEKKGFTLKGLKLLTVDQAFAEKHYADLSAKPFFNGLVEYIISGPVVAMVWEGK 78

HSP 2 Score: 59.3066 bits (142), Expect = 1.159e-31
Identity = 34/79 (43.04%), Postives = 42/79 (53.16%), Query Frame = 3 
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMGVMA-RDRKDEINCGSNPKTG*LHKHAEKWVYE 851
            V+AMVWEG+  +T GRK+IGAT+P +S PG IRGD A  + RN   G  A    K EI                 W+YE
Sbjct:   70 VVAMVWEGKNVVTTGRKIIGATNPAESPPGTIRGDFAIDIGRNVIHGSDAVESAKKEIGLWFPEGVANWSSSLHPWIYE 148
[Close]
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_PROM4 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9211) GN=ndk PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.417e-31
Identity = 47/77 (61.04%), Postives = 64/77 (83.12%), Query Frame = 1 
Query:  415 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP--SLPWYGK 639
            ERTF+AIKPDGVQRGL+ EI+SRFERKGFKL+A+K ++PS+  A++HY   +ERPFF GL +F++SGP  ++ W G+
Sbjct:    4 ERTFLAIKPDGVQRGLVGEILSRFERKGFKLIALKQLIPSRALAEQHYGVHRERPFFKGLVDFITSGPVIAMIWEGE 80

HSP 2 Score: 53.5286 bits (127), Expect = 1.417e-31
Identity = 27/47 (57.45%), Postives = 32/47 (68.09%), Query Frame = 3 
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMG 758
            VIAM+WEGE  I   RKLIG+T P  ++PG IRGDLA  + RN   G
Sbjct:   72 VIAMIWEGEGVILGARKLIGSTKPLDADPGTIRGDLAIDIGRNVIHG 118

HSP 3 Score: 21.557 bits (44), Expect = 1.417e-31
Identity = 7/10 (70.00%), Postives = 9/10 (90.00%), Query Frame = 2 
Query:  740 KKLIHGSDGP 769
            + +IHGSDGP
Sbjct:  113 RNVIHGSDGP 122
[Close]
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_SYNSC (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9605) GN=ndk PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.509e-31
Identity = 48/76 (63.16%), Postives = 60/76 (78.95%), Query Frame = 1 
Query:  415 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP--SLPWYG 636
            ERTFIAIKPDGVQRGL+ EI+ RFERKGFKLV +K + PS+  A++HY   KERPFF GL +F++SGP  ++ W G
Sbjct:    3 ERTFIAIKPDGVQRGLVGEILGRFERKGFKLVGLKQITPSRALAEQHYGVHKERPFFAGLVDFITSGPVVAMVWEG 78

HSP 2 Score: 56.6102 bits (135), Expect = 1.509e-31
Identity = 28/47 (59.57%), Postives = 33/47 (70.21%), Query Frame = 3 
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMG 758
            V+AMVWEG+  I   RKLIGAT P ++EPG IRGDLA  + RN   G
Sbjct:   71 VVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHG 117
[Close]
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_SYNPX (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain WH8102) GN=ndk PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.509e-31
Identity = 48/76 (63.16%), Postives = 60/76 (78.95%), Query Frame = 1 
Query:  415 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP--SLPWYG 636
            ERTFIAIKPDGVQRGL+ EI+ RFERKGFKLV +K + PS+  A++HY   KERPFF GL +F++SGP  ++ W G
Sbjct:    3 ERTFIAIKPDGVQRGLVGEILGRFERKGFKLVGLKQITPSRALAEQHYGVHKERPFFAGLVDFITSGPVVAMVWEG 78

HSP 2 Score: 56.6102 bits (135), Expect = 1.509e-31
Identity = 28/47 (59.57%), Postives = 33/47 (70.21%), Query Frame = 3 
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMG 758
            V+AMVWEG+  I   RKLIGAT P ++EPG IRGDLA  + RN   G
Sbjct:   71 VVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHG 117
[Close]
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK1_MESCR (Nucleoside diphosphate kinase 1 OS=Mesembryanthemum crystallinum GN=NDKP1 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.510e-31
Identity = 48/78 (61.54%), Postives = 60/78 (76.92%), Query Frame = 1 
Query:  412 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP--SLPWYGK 639
            ME+TFI IKPDGVQRGL+ EIISRFE+KGF L A+K +   + FA+KHY DL  +PFFNGL E++ SGP  ++ W GK
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIISRFEKKGFSLKALKFINVDRPFAEKHYADLSAKPFFNGLVEYIVSGPVVAMVWEGK 78

HSP 2 Score: 56.225 bits (134), Expect = 1.510e-31
Identity = 27/47 (57.45%), Postives = 33/47 (70.21%), Query Frame = 3 
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMG 758
            V+AMVWEG+  +  GRK+IGAT+P  SEPG IRGD A  + RN   G
Sbjct:   70 VVAMVWEGKGVVLTGRKIIGATNPLASEPGTIRGDFAIDIGRNVIHG 116
The following BLAST results are available for this feature:
BLAST of EY705313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_PROM94.027e-3263.64Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_SYNPW5.244e-3265.79Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK_PROMM6.465e-3262.34Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_PROM28.895e-3262.34Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_PROM31.158e-3161.04Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_HELAN1.159e-3158.97Nucleoside diphosphate kinase OS=Helianthus annuus... [more]
NDK_PROM41.417e-3161.04Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_SYNSC1.509e-3163.16Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK_SYNPX1.509e-3163.16Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK1_MESCR1.510e-3161.54Nucleoside diphosphate kinase 1 OS=Mesembryanthemu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-042-B10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY705313 ID=EY705313; Name=EY705313; organism=Citrus sinensis; type=EST; length=922bp
TGCAGACCCACGCGTCCGGTTTTCTGATTATCTTTATGTCTGTTTTGCAA
GTTGTTACTGACTGCACTTCATATTATGAAAATCTGCAAGCCAAAGTTTC
TTATCAATCTGATAAAACCTTCACTCTCTTTACTAAAGGTGGATCTAAAA
GAAGAAATTAATATTGTTGATAAAAGCTTGGATAACCATTTCTTCACAAT
TTTATCTCTTCAAGAGAACAATAATAGGAAATATTTTATGTAACTTTATG
ACATCATAGCTTTGAATATTAATTGCACGAAGTTGCGCCTTCCTTTTTCC
TCCAAAATCTCTGATCTTAATTTTTCCTTTGTGCTTTTCTTTATTATTGC
AGCTTACATGCTCCAGGAGCAGGAAGTACATGCTGCAGAGGTACTTTAAT
CACTGATCTAAATGGAACGCACTTTCATTGCCATCAAGCCAGATGGGGTG
CAAAGAGGACTGATTTCAGAAATCATCTCTCGCTTTGAGCGCAAAGGCTT
TAAGCTTGTGGCCATTAAGATAGTAGTTCCATCAAAAGAGTTTGCACAAA
AACATTATCATGATCTGAAGGAAAGACCCTTCTTTAATGGCCTGTGCGAG
TTCCTTAGCTCTGGTCCGTCATTGCCATGGTATGGGAAGGAGAGGNNAGT
ATTACGTATGGTCGCAAACTCATTGGAGCCACAGATCCTCAGAAATCAGA
ACCTGGAAACATCAGAGGCGATCTAGCTGGTGTTGTTTGAAGAAACTCAT
TCATGGGAGTGATGGCCCGAGACCGCAAGGATGAAATAAATTGTGGGTCC
AACCCCAAGACTGGTTAATTACACAAGCATGCAGAGAAGTGGGTCTATGA
ATCCACTGATTACATTTTTCTCTACTTTATTAAAACTAAGGCCTACTGAA
TAGGGGATAAAAGCATAATGGT
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