EY705313

Overview
NameEY705313
Unique NameEY705313
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_SHESM (Nucleoside diphosphate kinase OS=Shewanella sp. (strain MR-4) GN=ndk PE=3 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 1.649e-14
Identity = 32/69 (46.38%), Postives = 43/69 (62.32%), Query Frame = 1 
Query:  412 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP 618
            +ERTF  IKPD V +  I  I +RFE  G K+VA K++  +KE A+  Y +  ER FF  L  F++SGP
Sbjct:    3 IERTFSIIKPDAVAKNHIGAIYNRFETAGLKIVAAKMLHLTKEQAEGFYAEHSERGFFGALVAFMTSGP 71

HSP 2 Score: 38.891 bits (89), Expect = 1.649e-14
Identity = 17/47 (36.17%), Postives = 29/47 (61.70%), Query Frame = 3 
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMG 758
            ++  V EGE ++   R+++GAT+P ++ PG IR D A  +  N+  G
Sbjct:   72 IMVQVLEGENAVLAHREILGATNPAQAAPGTIRADFAQSIDENAAHG 118
[Close]
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_SHESA (Nucleoside diphosphate kinase OS=Shewanella sp. (strain ANA-3) GN=ndk PE=3 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 1.649e-14
Identity = 32/69 (46.38%), Postives = 43/69 (62.32%), Query Frame = 1 
Query:  412 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP 618
            +ERTF  IKPD V +  I  I +RFE  G K+VA K++  +KE A+  Y +  ER FF  L  F++SGP
Sbjct:    3 IERTFSIIKPDAVAKNHIGAIYNRFETAGLKIVAAKMLHLTKEQAEGFYAEHSERGFFGALVAFMTSGP 71

HSP 2 Score: 38.891 bits (89), Expect = 1.649e-14
Identity = 17/47 (36.17%), Postives = 29/47 (61.70%), Query Frame = 3 
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMG 758
            ++  V EGE ++   R+++GAT+P ++ PG IR D A  +  N+  G
Sbjct:   72 IMVQVLEGENAVLAHREILGATNPAQAAPGTIRADFAESIDENAAHG 118
[Close]
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_SHEPC (Nucleoside diphosphate kinase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=ndk PE=3 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 1.649e-14
Identity = 32/69 (46.38%), Postives = 43/69 (62.32%), Query Frame = 1 
Query:  412 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP 618
            +ERTF  IKPD V +  I  I +RFE  G K+VA K++  +KE A+  Y +  ER FF  L  F++SGP
Sbjct:    3 IERTFSIIKPDAVAKNHIGAIYNRFETAGLKIVAAKMLHLTKEQAEGFYAEHSERGFFGALVAFMTSGP 71

HSP 2 Score: 38.891 bits (89), Expect = 1.649e-14
Identity = 17/47 (36.17%), Postives = 29/47 (61.70%), Query Frame = 3 
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMG 758
            ++  V EGE ++   R+++GAT+P ++ PG IR D A  +  N+  G
Sbjct:   72 IMVQVLEGENAVLAHREILGATNPAQAAPGTIRADFAESIDENAAHG 118
[Close]
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_SHEON (Nucleoside diphosphate kinase OS=Shewanella oneidensis GN=ndk PE=3 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 1.649e-14
Identity = 32/69 (46.38%), Postives = 43/69 (62.32%), Query Frame = 1 
Query:  412 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP 618
            +ERTF  IKPD V +  I  I +RFE  G K+VA K++  +KE A+  Y +  ER FF  L  F++SGP
Sbjct:    3 IERTFSIIKPDAVAKNHIGAIYNRFETAGLKIVAAKMLHLTKEQAEGFYAEHSERGFFGALVAFMTSGP 71

HSP 2 Score: 38.891 bits (89), Expect = 1.649e-14
Identity = 17/47 (36.17%), Postives = 29/47 (61.70%), Query Frame = 3 
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMG 758
            ++  V EGE ++   R+++GAT+P ++ PG IR D A  +  N+  G
Sbjct:   72 IMVQVLEGENAVLAHREILGATNPAQAAPGTIRADFAQSIDENAAHG 118
[Close]
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_NEIG2 (Nucleoside diphosphate kinase OS=Neisseria gonorrhoeae (strain NCCP11945) GN=ndk PE=3 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 1.653e-14
Identity = 32/69 (46.38%), Postives = 45/69 (65.22%), Query Frame = 1 
Query:  412 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP 618
            +ERT   IKPD V + +I +I SRFE  G K+VA K+   + + AQ+ Y   K+RPF+ GL EF++ GP
Sbjct:    3 IERTISIIKPDAVGKNVIGKIYSRFEENGLKIVAAKMKQLTLKEAQEFYAVHKDRPFYAGLVEFMTGGP 71

HSP 2 Score: 36.5798 bits (83), Expect = 1.653e-14
Identity = 19/47 (40.43%), Postives = 28/47 (59.57%), Query Frame = 3 
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMG 758
            V+  V EGE ++   R+L+GAT+P ++  G IR D A  V  N+  G
Sbjct:   72 VMIQVLEGENAVLKNRELMGATNPTEAAEGTIRADFATSVSINAVHG 118
[Close]
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_DESDG (Nucleoside diphosphate kinase OS=Desulfovibrio desulfuricans (strain G20) GN=ndk PE=3 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.653e-14
Identity = 31/68 (45.59%), Postives = 45/68 (66.18%), Query Frame = 1 
Query:  415 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP 618
            ERTF  IKPD  +R L   I+S  ++ G ++VA+K +  ++E A+  YH  KERPFF  L +F++SGP
Sbjct:    3 ERTFAIIKPDATRRNLEGPILSVIQQNGLRVVAMKKMRLTREQAEGFYHVHKERPFFASLTDFMTSGP 70

HSP 2 Score: 37.3502 bits (85), Expect = 1.653e-14
Identity = 18/47 (38.30%), Postives = 29/47 (61.70%), Query Frame = 3 
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMG 758
            ++AMV EG+ ++   R+L+GAT+P+ +  G IR   A  +  NS  G
Sbjct:   71 IVAMVLEGDNAVARWRELMGATNPENAAEGTIRRQFAEGLEANSVHG 117
[Close]
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_BDEBA (Nucleoside diphosphate kinase OS=Bdellovibrio bacteriovorus GN=ndk PE=3 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 1.653e-14
Identity = 29/69 (42.03%), Postives = 44/69 (63.77%), Query Frame = 1 
Query:  412 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP 618
            +E+TF  IKP+ +++  I +I+S FE  G K+ A KI V +   A++ Y + K RPFF  L  F++SGP
Sbjct:    3 IEQTFSIIKPNAMKKNAIGDIVSMFEANGLKIAAAKITVLTTAKAEEFYAEHKARPFFGELVSFMTSGP 71

HSP 2 Score: 38.891 bits (89), Expect = 1.653e-14
Identity = 17/47 (36.17%), Postives = 28/47 (59.57%), Query Frame = 3 
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMG 758
            V+ M  +GE ++   R+++GATDP+K+ PG +R      V  N+  G
Sbjct:   72 VMLMCLQGEGAVLKNREIMGATDPKKANPGTVRAKFGDNVGENAVHG 118
[Close]
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_POLSQ (Nucleoside diphosphate kinase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=ndk PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 1.653e-14
Identity = 29/69 (42.03%), Postives = 42/69 (60.87%), Query Frame = 1 
Query:  412 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP 618
            +ERT   IKPD V + +I +I  RFE  G K++A ++   S+  A++ Y   K+RPFF  L  F+ SGP
Sbjct:    3 IERTLSIIKPDAVAKNVIGKIYDRFESAGLKIIASRMAHLSQNEAEQFYGVHKDRPFFKDLVSFMISGP 71

HSP 2 Score: 41.5874 bits (96), Expect = 1.653e-14
Identity = 20/47 (42.55%), Postives = 29/47 (61.70%), Query Frame = 3 
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMG 758
            V+  V +GE +I   R L+GATDP+K++ G IR D A  +  N+  G
Sbjct:   72 VMIQVLQGEGAIAKNRDLMGATDPKKADKGTIRADFADSIDANAVHG 118
[Close]
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_SHEB9 (Nucleoside diphosphate kinase OS=Shewanella baltica (strain OS195) GN=ndk PE=3 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 2.143e-14
Identity = 32/69 (46.38%), Postives = 43/69 (62.32%), Query Frame = 1 
Query:  412 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP 618
            +ERTF  IKPD V +  I  I +RFE  G K+VA K++  +KE A+  Y +  ER FF  L  F++SGP
Sbjct:    3 IERTFSIIKPDAVAKNHIGAIYNRFETAGLKIVASKMLHLTKEQAEGFYAEHSERGFFGALVAFMTSGP 71

HSP 2 Score: 38.891 bits (89), Expect = 2.143e-14
Identity = 17/47 (36.17%), Postives = 29/47 (61.70%), Query Frame = 3 
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMG 758
            ++  V EGE ++   R+++GAT+P ++ PG IR D A  +  N+  G
Sbjct:   72 IMVQVLEGENAVLAHREILGATNPAQAAPGTIRADFAESIDENAAHG 118
[Close]
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_SHEB8 (Nucleoside diphosphate kinase OS=Shewanella baltica (strain OS185) GN=ndk PE=3 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 2.143e-14
Identity = 32/69 (46.38%), Postives = 43/69 (62.32%), Query Frame = 1 
Query:  412 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP 618
            +ERTF  IKPD V +  I  I +RFE  G K+VA K++  +KE A+  Y +  ER FF  L  F++SGP
Sbjct:    3 IERTFSIIKPDAVAKNHIGAIYNRFETAGLKIVASKMLHLTKEQAEGFYAEHSERGFFGALVAFMTSGP 71

HSP 2 Score: 38.891 bits (89), Expect = 2.143e-14
Identity = 17/47 (36.17%), Postives = 29/47 (61.70%), Query Frame = 3 
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMG 758
            ++  V EGE ++   R+++GAT+P ++ PG IR D A  +  N+  G
Sbjct:   72 IMVQVLEGENAVLAHREILGATNPAQAAPGTIRADFAESIDENAAHG 118
The following BLAST results are available for this feature:
BLAST of EY705313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_SHESM1.649e-1446.38Nucleoside diphosphate kinase OS=Shewanella sp. (s... [more]
NDK_SHESA1.649e-1446.38Nucleoside diphosphate kinase OS=Shewanella sp. (s... [more]
NDK_SHEPC1.649e-1446.38Nucleoside diphosphate kinase OS=Shewanella putref... [more]
NDK_SHEON1.649e-1446.38Nucleoside diphosphate kinase OS=Shewanella oneide... [more]
NDK_NEIG21.653e-1446.38Nucleoside diphosphate kinase OS=Neisseria gonorrh... [more]
NDK_DESDG1.653e-1445.59Nucleoside diphosphate kinase OS=Desulfovibrio des... [more]
NDK_BDEBA1.653e-1442.03Nucleoside diphosphate kinase OS=Bdellovibrio bact... [more]
NDK_POLSQ1.653e-1442.03Nucleoside diphosphate kinase OS=Polynucleobacter ... [more]
NDK_SHEB92.143e-1446.38Nucleoside diphosphate kinase OS=Shewanella baltic... [more]
NDK_SHEB82.143e-1446.38Nucleoside diphosphate kinase OS=Shewanella baltic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-042-B10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY705313 ID=EY705313; Name=EY705313; organism=Citrus sinensis; type=EST; length=922bp
TGCAGACCCACGCGTCCGGTTTTCTGATTATCTTTATGTCTGTTTTGCAA
GTTGTTACTGACTGCACTTCATATTATGAAAATCTGCAAGCCAAAGTTTC
TTATCAATCTGATAAAACCTTCACTCTCTTTACTAAAGGTGGATCTAAAA
GAAGAAATTAATATTGTTGATAAAAGCTTGGATAACCATTTCTTCACAAT
TTTATCTCTTCAAGAGAACAATAATAGGAAATATTTTATGTAACTTTATG
ACATCATAGCTTTGAATATTAATTGCACGAAGTTGCGCCTTCCTTTTTCC
TCCAAAATCTCTGATCTTAATTTTTCCTTTGTGCTTTTCTTTATTATTGC
AGCTTACATGCTCCAGGAGCAGGAAGTACATGCTGCAGAGGTACTTTAAT
CACTGATCTAAATGGAACGCACTTTCATTGCCATCAAGCCAGATGGGGTG
CAAAGAGGACTGATTTCAGAAATCATCTCTCGCTTTGAGCGCAAAGGCTT
TAAGCTTGTGGCCATTAAGATAGTAGTTCCATCAAAAGAGTTTGCACAAA
AACATTATCATGATCTGAAGGAAAGACCCTTCTTTAATGGCCTGTGCGAG
TTCCTTAGCTCTGGTCCGTCATTGCCATGGTATGGGAAGGAGAGGNNAGT
ATTACGTATGGTCGCAAACTCATTGGAGCCACAGATCCTCAGAAATCAGA
ACCTGGAAACATCAGAGGCGATCTAGCTGGTGTTGTTTGAAGAAACTCAT
TCATGGGAGTGATGGCCCGAGACCGCAAGGATGAAATAAATTGTGGGTCC
AACCCCAAGACTGGTTAATTACACAAGCATGCAGAGAAGTGGGTCTATGA
ATCCACTGATTACATTTTTCTCTACTTTATTAAAACTAAGGCCTACTGAA
TAGGGGATAAAAGCATAATGGT
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