EY705313

Overview
NameEY705313
Unique NameEY705313
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length922
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_BACCZ (Nucleoside diphosphate kinase OS=Bacillus cereus (strain ZK / E33L) GN=ndk PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.902e-23
Identity = 38/78 (48.72%), Postives = 57/78 (73.08%), Query Frame = 1 
Query:  412 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP--SLPWYGK 639
            ME+TF+ +KPDGVQR  I EI++RFE+KGF+LV  K++  + E A +HY +  E+PFF  L +F++SGP  ++ W G+
Sbjct:    1 MEKTFLMVKPDGVQRAFIGEIVARFEKKGFQLVGAKLMQVTPEIAGQHYAEHTEKPFFGELVDFITSGPVFAMVWQGE 78

HSP 2 Score: 44.2838 bits (103), Expect = 5.902e-23
Identity = 20/47 (42.55%), Postives = 27/47 (57.45%), Query Frame = 3 
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMG 758
            V AMVW+GE  +   R ++G T P ++ PG IRGD    V +N   G
Sbjct:   70 VFAMVWQGEGVVDTARNMMGKTRPHEAAPGTIRGDFGVTVAKNIIHG 116
[Close]
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_BACC1 (Nucleoside diphosphate kinase OS=Bacillus cereus (strain ATCC 10987) GN=ndk PE=3 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 5.902e-23
Identity = 38/78 (48.72%), Postives = 57/78 (73.08%), Query Frame = 1 
Query:  412 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP--SLPWYGK 639
            ME+TF+ +KPDGVQR  I EI++RFE+KGF+LV  K++  + E A +HY +  E+PFF  L +F++SGP  ++ W G+
Sbjct:    1 MEKTFLMVKPDGVQRAFIGEIVARFEKKGFQLVGAKLMQVTPEIAGQHYAEHTEKPFFGELVDFITSGPVFAMVWQGE 78

HSP 2 Score: 44.2838 bits (103), Expect = 5.902e-23
Identity = 20/47 (42.55%), Postives = 27/47 (57.45%), Query Frame = 3 
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMG 758
            V AMVW+GE  +   R ++G T P ++ PG IRGD    V +N   G
Sbjct:   70 VFAMVWQGEGVVDTARNMMGKTRPHEAAPGTIRGDFGVTVAKNIIHG 116
[Close]
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_BACAN (Nucleoside diphosphate kinase OS=Bacillus anthracis GN=ndk PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.902e-23
Identity = 38/78 (48.72%), Postives = 57/78 (73.08%), Query Frame = 1 
Query:  412 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP--SLPWYGK 639
            ME+TF+ +KPDGVQR  I EI++RFE+KGF+LV  K++  + E A +HY +  E+PFF  L +F++SGP  ++ W G+
Sbjct:    1 MEKTFLMVKPDGVQRAFIGEIVARFEKKGFQLVGAKLMQVTPEIAGQHYAEHTEKPFFGELVDFITSGPVFAMVWQGE 78

HSP 2 Score: 44.2838 bits (103), Expect = 5.902e-23
Identity = 20/47 (42.55%), Postives = 27/47 (57.45%), Query Frame = 3 
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMG 758
            V AMVW+GE  +   R ++G T P ++ PG IRGD    V +N   G
Sbjct:   70 VFAMVWQGEGVVDTARNMMGKTRPHEAAPGTIRGDFGVTVAKNIIHG 116
[Close]
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_PELTS (Nucleoside diphosphate kinase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=ndk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.680e-23
Identity = 37/69 (53.62%), Postives = 54/69 (78.26%), Query Frame = 1 
Query:  412 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP 618
            MERT++ IKPDGVQRGL+ EII+RFE++GFK+V +K++   +E A+KHY + K +PFF  L  +++S P
Sbjct:    1 MERTYLMIKPDGVQRGLVGEIIARFEKRGFKIVGLKMIRIGRELAEKHYGEHKGKPFFEPLVGYITSSP 69

HSP 2 Score: 42.743 bits (99), Expect = 7.680e-23
Identity = 21/47 (44.68%), Postives = 30/47 (63.83%), Query Frame = 3 
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMG 758
            V+AMV EG+ ++   R+++GATDP K+ PG IRG     + RN   G
Sbjct:   70 VVAMVIEGKNAVGAAREMMGATDPLKAAPGTIRGTYGIDIGRNVIHG 116
[Close]
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_STAAW (Nucleoside diphosphate kinase OS=Staphylococcus aureus (strain MW2) GN=ndk PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 9.993e-23
Identity = 37/69 (53.62%), Postives = 48/69 (69.57%), Query Frame = 1 
Query:  412 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP 618
            MERTF+ IKPD VQR LI E+ISR ERKG KLV  K++    E A+ HY + + +PF+N L  F++S P
Sbjct:    1 MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAP 69

HSP 2 Score: 50.0618 bits (118), Expect = 9.993e-23
Identity = 32/82 (39.02%), Postives = 46/82 (56.10%), Query Frame = 3 
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMGVMARDRKD-EINCGSNPKTG*LHKHA---EKWVYE 851
            V AMV EGE ++   R +IG+T+P ++ PG+IRGDL   V RN   G  + D  + EIN   N     +  +A   + W+YE
Sbjct:   70 VFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLDSAEREINLWFNENE--ITSYASPRDAWLYE 149
[Close]
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_STAAS (Nucleoside diphosphate kinase OS=Staphylococcus aureus (strain MSSA476) GN=ndk PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 9.993e-23
Identity = 37/69 (53.62%), Postives = 48/69 (69.57%), Query Frame = 1 
Query:  412 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP 618
            MERTF+ IKPD VQR LI E+ISR ERKG KLV  K++    E A+ HY + + +PF+N L  F++S P
Sbjct:    1 MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAP 69

HSP 2 Score: 50.0618 bits (118), Expect = 9.993e-23
Identity = 32/82 (39.02%), Postives = 46/82 (56.10%), Query Frame = 3 
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMGVMARDRKD-EINCGSNPKTG*LHKHA---EKWVYE 851
            V AMV EGE ++   R +IG+T+P ++ PG+IRGDL   V RN   G  + D  + EIN   N     +  +A   + W+YE
Sbjct:   70 VFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLDSAEREINLWFNENE--ITSYASPRDAWLYE 149
[Close]
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_MACCJ (Nucleoside diphosphate kinase OS=Macrococcus caseolyticus (strain JCSC5402) GN=ndk PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.692e-22
Identity = 37/69 (53.62%), Postives = 50/69 (72.46%), Query Frame = 1 
Query:  412 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP 618
            ME+TF+ IKPDGV RGLI EI+ R E KG K+V  K++  S++ A+ HY +  E+PFF  L EF++SGP
Sbjct:    1 MEKTFLMIKPDGVGRGLIGEIVKRIENKGIKVVGAKLMTVSEDLAKTHYGEHSEKPFFGELVEFITSGP 69

HSP 2 Score: 45.0542 bits (105), Expect = 1.692e-22
Identity = 22/47 (46.81%), Postives = 28/47 (59.57%), Query Frame = 3 
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMG 758
            V AMV EG+  +  GR L+G T+P +S PG IRGD    V +N   G
Sbjct:   70 VFAMVLEGDNVVEIGRTLVGKTNPAESAPGTIRGDFGMTVGKNIIHG 116
[Close]
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_DESAP (Nucleoside diphosphate kinase OS=Desulforudis audaxviator (strain MP104C) GN=ndk PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.865e-22
Identity = 36/69 (52.17%), Postives = 56/69 (81.16%), Query Frame = 1 
Query:  412 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP 618
            M+RTF+ +KPDGVQRGL+ E+I+RFER+GFKLVA+K++   +  A++HY + + +PFF+ L  +++SGP
Sbjct:    1 MDRTFVMVKPDGVQRGLVGEVITRFERRGFKLVALKLLWIDRGLAERHYEEHRGKPFFDELVRYITSGP 69

HSP 2 Score: 38.891 bits (89), Expect = 2.865e-22
Identity = 22/47 (46.81%), Postives = 27/47 (57.45%), Query Frame = 3 
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMG 758
            V AMV EG   +T  R+++GAT P K+ PG IRG     V RN   G
Sbjct:   70 VAAMVLEGREVVTTVREMMGATQPAKALPGTIRGTYGIDVGRNIVHG 116
[Close]
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_STAAU (Nucleoside diphosphate kinase OS=Staphylococcus aureus GN=ndk PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.865e-22
Identity = 37/69 (53.62%), Postives = 48/69 (69.57%), Query Frame = 1 
Query:  412 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP 618
            MERTF+ IKPD VQR LI E+ISR ERKG KLV  K++    E A+ HY + + +PF+N L  F++S P
Sbjct:    1 MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAP 69

HSP 2 Score: 48.521 bits (114), Expect = 2.865e-22
Identity = 31/82 (37.80%), Postives = 46/82 (56.10%), Query Frame = 3 
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMGVMARDRKD-EINCGSNPKTG*LHKHA---EKWVYE 851
            V AMV EGE ++   R +IG+T+P ++ PG+IRGDL   V RN   G  + +  + EIN   N     +  +A   + W+YE
Sbjct:   70 VFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENE--ITSYASPRDAWLYE 149
[Close]
BLAST of EY705313 vs. ExPASy Swiss-Prot
Match: NDK_STAAT (Nucleoside diphosphate kinase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=ndk PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.865e-22
Identity = 37/69 (53.62%), Postives = 48/69 (69.57%), Query Frame = 1 
Query:  412 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGP 618
            MERTF+ IKPD VQR LI E+ISR ERKG KLV  K++    E A+ HY + + +PF+N L  F++S P
Sbjct:    1 MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAP 69

HSP 2 Score: 48.521 bits (114), Expect = 2.865e-22
Identity = 31/82 (37.80%), Postives = 46/82 (56.10%), Query Frame = 3 
Query:  618 VIAMVWEGEXSITYGRKLIGATDPQKSEPGNIRGDLAGVV*RNSFMGVMARDRKD-EINCGSNPKTG*LHKHA---EKWVYE 851
            V AMV EGE ++   R +IG+T+P ++ PG+IRGDL   V RN   G  + +  + EIN   N     +  +A   + W+YE
Sbjct:   70 VFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENE--ITSYASPRDAWLYE 149
The following BLAST results are available for this feature:
BLAST of EY705313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_BACCZ5.902e-2348.72Nucleoside diphosphate kinase OS=Bacillus cereus (... [more]
NDK_BACC15.902e-2348.72Nucleoside diphosphate kinase OS=Bacillus cereus (... [more]
NDK_BACAN5.902e-2348.72Nucleoside diphosphate kinase OS=Bacillus anthraci... [more]
NDK_PELTS7.680e-2353.62Nucleoside diphosphate kinase OS=Pelotomaculum the... [more]
NDK_STAAW9.993e-2353.62Nucleoside diphosphate kinase OS=Staphylococcus au... [more]
NDK_STAAS9.993e-2353.62Nucleoside diphosphate kinase OS=Staphylococcus au... [more]
NDK_MACCJ1.692e-2253.62Nucleoside diphosphate kinase OS=Macrococcus caseo... [more]
NDK_DESAP2.865e-2252.17Nucleoside diphosphate kinase OS=Desulforudis auda... [more]
NDK_STAAU2.865e-2253.62Nucleoside diphosphate kinase OS=Staphylococcus au... [more]
NDK_STAAT2.865e-2253.62Nucleoside diphosphate kinase OS=Staphylococcus au... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-042-B10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY705313 ID=EY705313; Name=EY705313; organism=Citrus sinensis; type=EST; length=922bp
TGCAGACCCACGCGTCCGGTTTTCTGATTATCTTTATGTCTGTTTTGCAA
GTTGTTACTGACTGCACTTCATATTATGAAAATCTGCAAGCCAAAGTTTC
TTATCAATCTGATAAAACCTTCACTCTCTTTACTAAAGGTGGATCTAAAA
GAAGAAATTAATATTGTTGATAAAAGCTTGGATAACCATTTCTTCACAAT
TTTATCTCTTCAAGAGAACAATAATAGGAAATATTTTATGTAACTTTATG
ACATCATAGCTTTGAATATTAATTGCACGAAGTTGCGCCTTCCTTTTTCC
TCCAAAATCTCTGATCTTAATTTTTCCTTTGTGCTTTTCTTTATTATTGC
AGCTTACATGCTCCAGGAGCAGGAAGTACATGCTGCAGAGGTACTTTAAT
CACTGATCTAAATGGAACGCACTTTCATTGCCATCAAGCCAGATGGGGTG
CAAAGAGGACTGATTTCAGAAATCATCTCTCGCTTTGAGCGCAAAGGCTT
TAAGCTTGTGGCCATTAAGATAGTAGTTCCATCAAAAGAGTTTGCACAAA
AACATTATCATGATCTGAAGGAAAGACCCTTCTTTAATGGCCTGTGCGAG
TTCCTTAGCTCTGGTCCGTCATTGCCATGGTATGGGAAGGAGAGGNNAGT
ATTACGTATGGTCGCAAACTCATTGGAGCCACAGATCCTCAGAAATCAGA
ACCTGGAAACATCAGAGGCGATCTAGCTGGTGTTGTTTGAAGAAACTCAT
TCATGGGAGTGATGGCCCGAGACCGCAAGGATGAAATAAATTGTGGGTCC
AACCCCAAGACTGGTTAATTACACAAGCATGCAGAGAAGTGGGTCTATGA
ATCCACTGATTACATTTTTCTCTACTTTATTAAAACTAAGGCCTACTGAA
TAGGGGATAAAAGCATAATGGT
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