EY705312

Overview
NameEY705312
Unique NameEY705312
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY705312_ssr32 microsatellite EY705312_ssr32:32..47. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY705312 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 1.091e-64
Identity = 103/168 (61.31%), Postives = 123/168 (73.21%), Query Frame = 1
Query:  163 FAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALXTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSV 666
            +AG PW++A ATFYG    S TMGGACGYGN+Y  GYGV T AL TALFN G +CG CF+LKC   P  C  G+PA ++TATN CPPN+ Q S+NGGWCNPPR HFDL  P F+K+A ++AGI+PVSYRRV C+K GGIRF   G  Y+ LV V NV G GDI  ++V
Sbjct:   26 YAGTPWRTASATFYGDDTGSATMGGACGYGNMYDSGYGVATTALSTALFNEGYACGQCFQLKCVSSPN-CYYGSPATVVTATNICPPNYGQASNNGGWCNPPRVHFDLTKPAFMKIANWKAGIIPVSYRRVACKKIGGIRFKFEGNGYWLLVYVMNVGGPGDIKTMAV 192          

HSP 2 Score: 41.5874 bits (96), Expect = 1.091e-64
Identity = 18/35 (51.43%), Postives = 24/35 (68.57%), Query Frame = 3
Query:  678 TQWLSMSRNWGQNWQSNSQLVGQALSFRSTGSDRR 782
            T W++MS NWG ++Q+ S L GQ+LSFR T    R
Sbjct:  197 TGWINMSHNWGASYQAFSSLYGQSLSFRLTSYTTR 231          
BLAST of EY705312 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 2.872e-62
Identity = 97/172 (56.40%), Postives = 123/172 (71.51%), Query Frame = 1
Query:  151 IPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALXTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSV 666
            + G +  GPW+ AHATFYG      TMGGACGYGNL++ GYG++TAAL T LFN+G  CG CF++ C   P  C  G   + +TATN CPPN+ Q S+ GGWCNPPR HFD+A P F+KLA +RAGI+PV+YRRVPC++ GG+RF   G  Y+ L+ V NV GAGDI  ++V
Sbjct:   28 VAGYYRPGPWRYAHATFYGDETGGETMGGACGYGNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSKSPH-CYSGKSTV-VTATNLCPPNWYQDSNAGGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGMRFQFQGNSYWLLIFVMNVGGAGDIKSMAV 197          

HSP 2 Score: 43.1282 bits (100), Expect = 2.872e-62
Identity = 18/30 (60.00%), Postives = 23/30 (76.67%), Query Frame = 3
Query:  678 TQWLSMSRNWGQNWQSNSQLVGQALSFRST 767
            T W+SMS NWG ++Q+ S L GQ+LSFR T
Sbjct:  202 TNWISMSHNWGASYQAFSSLYGQSLSFRVT 231          
BLAST of EY705312 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 1.082e-61
Identity = 96/163 (58.90%), Postives = 120/163 (73.62%), Query Frame = 1
Query:  178 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALXTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSV 666
            W  A ATFYG      T  GACGYGNL+ QGYG+ TAAL TALFN+G +CGAC+E+ C  DPQWC PG  ++ ITATNFCP N+++ +D   WCNPP+ HFDL++ MFLK+A+Y+AG+VPV YRR+PC K GG++F   G  YF +VL+ NV GAGDI  V V
Sbjct:   58 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPG--SVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQV 216          

HSP 2 Score: 47.3654 bits (111), Expect = 1.082e-61
Identity = 18/33 (54.55%), Postives = 25/33 (75.76%), Query Frame = 3
Query:  678 TQWLSMSRNWGQNWQSNSQLVGQALSFRSTGSD 776
            T W++M +NWGQNW +++ L GQ LSFR T +D
Sbjct:  221 TGWITMKKNWGQNWTTSTVLTGQGLSFRVTTTD 253          
BLAST of EY705312 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 1.411e-61
Identity = 96/163 (58.90%), Postives = 120/163 (73.62%), Query Frame = 1
Query:  178 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALXTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSV 666
            W  A ATFYG      T  GACGYGNL+ QGYG+ TAAL TALFN+G +CGAC+E+ C  DPQWC PG  ++ ITATNFCP N+++ +D   WCNPP+ HFDL++ MFLK+A+Y+AG+VPV YRR+PC K GG++F   G  YF +VL+ NV GAGDI  V V
Sbjct:   52 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPG--SVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQV 210          

HSP 2 Score: 46.9802 bits (110), Expect = 1.411e-61
Identity = 19/33 (57.58%), Postives = 24/33 (72.73%), Query Frame = 3
Query:  678 TQWLSMSRNWGQNWQSNSQLVGQALSFRSTGSD 776
            T W++M +NWGQNW + + L GQ LSFR T SD
Sbjct:  215 TGWITMKKNWGQNWTTITVLTGQGLSFRVTTSD 247          
BLAST of EY705312 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 1.534e-60
Identity = 94/158 (59.49%), Postives = 117/158 (74.05%), Query Frame = 1
Query:  178 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALXTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 651
            W    ATFYG  +   T  GACGYG+L+ QGYG+ TAAL TALFNNG  CGAC+E+ C   PQWC PG  +I ITATNFCPP+F +P+DN  WCNPP+ HFDL+ PMFLK+A+Y+AG+VPV +RRVPC K GG++F I G  +F ++L  NV GAG +
Sbjct:   90 WGHGRATFYGDINGGETQQGACGYGDLHKQGYGLETAALSTALFNNGSRCGACYEIMCEHAPQWCLPG--SIKITATNFCPPDFTKPNDN--WCNPPQKHFDLSQPMFLKIAKYKAGVVPVKFRRVPCAKIGGVKFEIKGNPHFLMILPYNVGGAGAV 243          

HSP 2 Score: 46.595 bits (109), Expect = 1.534e-60
Identity = 19/33 (57.58%), Postives = 23/33 (69.70%), Query Frame = 3
Query:  678 TQWLSMSRNWGQNWQSNSQLVGQALSFRSTGSD 776
            TQW++M +NWGQ W +   L GQ LSFR T SD
Sbjct:  253 TQWIAMKKNWGQIWSTGVVLTGQCLSFRLTTSD 285          
BLAST of EY705312 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2)

HSP 1 Score: 207.223 bits (526), Expect = 2.613e-60
Identity = 92/163 (56.44%), Postives = 118/163 (72.39%), Query Frame = 1
Query:  178 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALXTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSV 666
            W  A ATFYG      T  GACGYG+L+ QGYG+ TAAL TALFN G +CGAC+++ C  DPQWC PG  ++ ITATNFCPP++++    G WCNPP+ HFDL++PMFLK+AQY+AG+VPV YRR+ C + GG++F   G  YF ++L  NV GAGDI  + V
Sbjct:   48 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVNDPQWCLPG--SVKITATNFCPPDYSK--TEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQV 206          

HSP 2 Score: 46.9802 bits (110), Expect = 2.613e-60
Identity = 18/33 (54.55%), Postives = 23/33 (69.70%), Query Frame = 3
Query:  678 TQWLSMSRNWGQNWQSNSQLVGQALSFRSTGSD 776
            T W++M +NWGQNW +   L GQ +SFR T SD
Sbjct:  211 TGWITMQKNWGQNWTTGVNLTGQGISFRVTTSD 243          
BLAST of EY705312 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 4.440e-60
Identity = 93/163 (57.06%), Postives = 117/163 (71.78%), Query Frame = 1
Query:  178 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALXTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSV 666
            W  A ATFYG      T  GACGYG+L+ QGYG+ TAAL TALFN G +CGAC+++ C  DPQWC PG   I ITATNFCPP++++    G WCNPP+ HFDL++PMFLK+AQY+AG+VPV YRR+ C + GG++F   G  YF ++L  NV GAGDI  + V
Sbjct:   55 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVHDPQWCLPGT--IKITATNFCPPDYSKTE--GVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQV 213          

HSP 2 Score: 46.9802 bits (110), Expect = 4.440e-60
Identity = 18/33 (54.55%), Postives = 23/33 (69.70%), Query Frame = 3
Query:  678 TQWLSMSRNWGQNWQSNSQLVGQALSFRSTGSD 776
            T W++M +NWGQNW +   L GQ +SFR T SD
Sbjct:  218 TGWITMQKNWGQNWTTGVNLTGQGISFRVTTSD 250          
BLAST of EY705312 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 4.446e-60
Identity = 97/169 (57.40%), Postives = 118/169 (69.82%), Query Frame = 1
Query:  166 AGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALXTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSV 666
            A   W    ATFYGG+D SGTMGGACGYGNLY QGYG+N AAL T LFN+G SCG C+ + C     P WC  G  AI +T TN+CPPN+  P   GGWCN  RPHFD++ P +  +  Y AGI+P+ Y++V C + GG+RFTINGF YF LVLVTN+AG+G I  +SV
Sbjct:   19 ARSDWLPGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGK-AITVTGTNYCPPNYDLPY--GGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGVRFTINGFNYFELVLVTNMAGSGSIASMSV 184          

HSP 2 Score: 44.2838 bits (103), Expect = 4.446e-60
Identity = 18/32 (56.25%), Postives = 22/32 (68.75%), Query Frame = 3
Query:  678 TQWLSMSRNWGQNWQSNSQLVGQALSFRSTGS 773
            T W+ M+RNWG NWQ  + L GQALSF  T +
Sbjct:  189 TGWIQMTRNWGANWQCLAGLAGQALSFNVTST 220          
BLAST of EY705312 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.551e-60
Identity = 98/173 (56.65%), Postives = 120/173 (69.36%), Query Frame = 1
Query:  139 ANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALXTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGG--WCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDI 651
            A   +   F    W  AHATFYG   AS TMGGACGYGNLY+ GYG +TAAL T LF +G  CG C++++C G    C  G+PAI +TATN CPPN+A+  D GG  WCNPPR HFDL+ P F+++A +RAGIVPV YRRVPC + GG+RF + G  Y+ L  V NVAGAGD+
Sbjct:   24 AATTVDAKFRAMQWTPAHATFYGDETASETMGGACGYGNLYASGYGTDTAALSTTLFKDGYGCGTCYQMRCVGTAS-CYRGSPAITVTATNLCPPNWAEDPDRGGGGWCNPPRAHFDLSKPAFMRMADWRAGIVPVMYRRVPCARAGGLRFALQGNPYWLLAYVMNVAGAGDV 195          

HSP 2 Score: 38.891 bits (89), Expect = 7.551e-60
Identity = 16/28 (57.14%), Postives = 22/28 (78.57%), Query Frame = 3
Query:  684 WLSMSRNWGQNWQSNSQLVGQALSFRST 767
            W+ MS NWG ++Q+ +QL GQALSF+ T
Sbjct:  208 WVRMSHNWGASYQAFAQLGGQALSFKVT 235          
BLAST of EY705312 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 1.675e-59
Identity = 97/165 (58.79%), Postives = 115/165 (69.70%), Query Frame = 1
Query:  178 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALXTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSV 666
            W    ATFYGG+D SGTMGGACGYGNLY QGYG+N AAL T LFNNG SCG C+ + C  D  P  C  G  AI +T TNFCPPN+  P   GGWCN  RPHFD++ P +  +  Y AGIVP+ Y++V C + GG+RFTI G  YF LVLVTN+AG+G I  +SV
Sbjct:   23 WLQGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNNGASCGQCYLIICNYDKAPSGCRMGT-AITVTGTNFCPPNYDLP--YGGWCNTTRPHFDMSQPAWENIGIYSAGIVPILYQQVKCWRSGGVRFTITGLNYFELVLVTNMAGSGSIASMSV 184          

HSP 2 Score: 45.4394 bits (106), Expect = 1.675e-59
Identity = 19/33 (57.58%), Postives = 23/33 (69.70%), Query Frame = 3
Query:  675 NTQWLSMSRNWGQNWQSNSQLVGQALSFRSTGS 773
            +T W+ MSRNWG NWQ  + L GQALSF  T +
Sbjct:  188 STGWIQMSRNWGANWQCLAGLAGQALSFTVTST 220          
The following BLAST results are available for this feature:
BLAST of EY705312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
EXP18_ARATH1.091e-6461.31Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=... [more]
EXPA7_ARATH2.872e-6256.40Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 ... [more]
EXP26_ARATH1.082e-6158.90Putative expansin-A26 OS=Arabidopsis thaliana GN=E... [more]
EXP22_ARATH1.411e-6158.90Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=... [more]
EXP24_ARATH1.534e-6059.49Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=... [more]
EXP23_ARATH2.613e-6056.44Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=... [more]
EXP25_ARATH4.440e-6057.06Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=... [more]
EXP19_ORYSJ4.446e-6057.40Expansin-A19 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP30_ORYSJ7.551e-6056.65Putative expansin-A30 OS=Oryza sativa subsp. japon... [more]
EXP18_ORYSJ1.675e-5958.79Expansin-A18 OS=Oryza sativa subsp. japonica GN=EX... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-042-B09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY705312 ID=EY705312; Name=EY705312; organism=Citrus sinensis; type=EST; length=888bp
TCGCCCGACCCACGCGTCCGCTCCTGCGCGTTCACTCACTCACTCACTCA
ACTCTCTGTCTCCCTCTCTTCAACTCCAACAATGGCTCTTTTCAGAATGC
TCTGCTTTTTCTCACTGGCACTCTCCTTATTTGCGACGGCCAACGCCAAG
ATTCCCGGTGTCTTCGCCGGTGGCCCCTGGCAATCGGCCCACGCCACTTT
TTACGGTGGCAGCGATGCTTCCGGCACTATGGGTGGTGCTTGTGGGTACG
GGAATCTGTACAGCCAGGGCTACGGAGTGAACACGGCGGCTCTCANCACG
GCGCTGTTCAACAACGGCTTGAGCTGCGGCGCGTGCTTCGAGTTAAAGTG
CGGCGGCGACCCGCAGTGGTGTAACCCGGGTAACCCGGCCATTCTGATCA
CGGCCACCAACTTTTGCCCCCCGAACTTCGCTCAGCCCTCCGATAATGGC
GGGTGGTGCAACCCTCCTCGCCCTCATTTCGATCTGGCCATGCCTATGTT
CCTCAAGCTTGCCCAGTACCGCGCTGGTATCGTCCCCGTTTCTTACCGCA
GGGTGCCCTGCAGAAAGCGAGGCGGAATCAGATTCACAATTAACGGTTTC
CGTTACTTCAACTTGGTCTTGGTCACCAACGTCGCGGGCGCAGGGGATAT
CGTGCGCGTGAGCGTGAAAGGGGCAACACCCAATGGCTGAGCATGAGCCG
CAACTGGGGGCAAAACTGGCAATCCAACTCTCAGCTCGTGGGCCAGGCAC
TTTCGTTTAGAAGTACGGGCAGTGACAGAAGACCCTCACCTCTTNGGACG
TGGCGCCAGCGAATTNGGCAGTCNGTCAACCTTTTTCGGAAAGATTTCCG
CGTCTAGTGAATTTTATTTTCTTTTTCACATTTTCATG
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