EY705312
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY705312 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 4.345e-54 Identity = 92/169 (54.44%), Postives = 112/169 (66.27%), Query Frame = 1 Query: 166 AGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALXTALFNNGLSCGACFELKC--GGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSV 666 A W ATFYGG+D SGTMGGACGYGNLY Q YG+N AAL T LFN+G SCG C+ + C G P WC G AI +T TN+ GGWCN RP+FD++ P + + Y AGIVP+ Y++V C + GG+RF INGF YF LVLVTN+AG+G IV +SV Sbjct: 19 ARSDWLPGTATFYGGADGSGTMGGACGYGNLYDQRYGINNAALSTPLFNDGASCGQCYLIICDYGKAPDWCKLGK-AITVTGTNY-----------GGWCNATRPYFDMSQPAWENIGIYSAGIVPILYQQVKCWRYGGVRFIINGFNYFELVLVTNMAGSGSIVSMSV 175 HSP 2 Score: 44.2838 bits (103), Expect = 4.345e-54 Identity = 18/32 (56.25%), Postives = 22/32 (68.75%), Query Frame = 3 Query: 678 TQWLSMSRNWGQNWQSNSQLVGQALSFRSTGS 773 T W+ M+RNWG NWQ + L GQALSF T + Sbjct: 180 TGWIQMTRNWGANWQCLAGLAGQALSFNVTST 211
BLAST of EY705312 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 181.8 bits (460), Expect = 9.613e-54 Identity = 83/163 (50.92%), Postives = 108/163 (66.26%), Query Frame = 1 Query: 178 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALXTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSV 666 W+ A AT+Y ++ +GGACGYG+L GYG+ T L LF G CGACFEL+C D +WC PG +I++TATNFC PN+ D GG CNPP HF L + F K+A ++AG +PV YRR+ CRK G +RFT++G F VL+TNVAG+GDI V + Sbjct: 40 WRPARATYYAATNPRDAVGGACGYGDLVKSGYGMATVGLSETLFERGQICGACFELRCVDDLRWCIPGT-SIILTATNFCAPNYGFDPDGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRINCRKEGSMRFTVDGGGIFISVLITNVAGSGDIAAVKI 201 HSP 2 Score: 50.447 bits (119), Expect = 9.613e-54 Identity = 22/34 (64.71%), Postives = 23/34 (67.65%), Query Frame = 3 Query: 678 TQWLSMSRNWGQNWQSNSQLVGQALSFRSTGSDR 779 T WL M RNWGQNW N+ L QALSF T SDR Sbjct: 206 TGWLPMGRNWGQNWHINADLRNQALSFEVTSSDR 239
BLAST of EY705312 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 1.482e-51 Identity = 83/166 (50.00%), Postives = 114/166 (68.67%), Query Frame = 1 Query: 178 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALXTALFNNGLSCGACFELKCG--GDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQY-RAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSV 666 W AHAT+YG +D+ ++GGACGY N Y G+G +TAAL LF +G SCG C++++C DP+WC G A+ +TATNFCP N +N GWCN PR HFD++ P F ++A+ GIVPV YRRV C++RGG+RFT+ G FN+V+++NV G G + V+V Sbjct: 27 WIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDFPADPKWCLRG-AAVTVTATNFCPTN-----NNNGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVAV 186 HSP 2 Score: 46.595 bits (109), Expect = 1.482e-51 Identity = 19/33 (57.58%), Postives = 24/33 (72.73%), Query Frame = 3 Query: 684 WLSMSRNWGQNWQSNSQLVGQALSFRSTGSDRR 782 WL M+RNWG NWQS+ L GQ LSF+ T +D + Sbjct: 194 WLQMTRNWGANWQSSGDLRGQRLSFKVTLTDSK 226
BLAST of EY705312 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2) HSP 1 Score: 177.178 bits (448), Expect = 5.574e-51 Identity = 82/170 (48.24%), Postives = 114/170 (67.06%), Query Frame = 1 Query: 157 GVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALXTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSV 666 G A W+SA A++Y +D +GGACG+G+L GYG+ T L TALF G +CG C+E+KC D ++C PG +I++TATNFC PNF P+D GG CNPP HF L + F K+A ++AG++P+ YRRV C + GG+RF + G +F VL++NV GAGD+ V + Sbjct: 26 GSSALSEWRSAKASYYA-ADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVDDLKYCLPGT-SIVVTATNFCAPNFGLPADAGGVCNPPNHHFLLPIQSFEKIALWKAGVMPIQYRRVNCLRDGGVRFAVAGRSFFLTVLISNVGGAGDVRSVKI 193 HSP 2 Score: 45.8246 bits (107), Expect = 5.574e-51 Identity = 20/31 (64.52%), Postives = 20/31 (64.52%), Query Frame = 3 Query: 684 WLSMSRNWGQNWQSNSQLVGQALSFRSTGSD 776 WLSM RNWGQ W NS GQ LSF T SD Sbjct: 200 WLSMGRNWGQIWHINSDFRGQPLSFELTSSD 230
BLAST of EY705312 vs. ExPASy Swiss-Prot
Match: EXP17_ORYSJ (Expansin-A17 OS=Oryza sativa subsp. japonica GN=EXPA17 PE=2 SV=2) HSP 1 Score: 195.667 bits (496), Expect = 3.046e-49 Identity = 93/165 (56.36%), Postives = 112/165 (67.88%), Query Frame = 1 Query: 178 WQSAHATFYGGSDASGT-MGGACGY-GNLYSQGYGVNTAALXTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSV 666 W ATFYG G GGACGY N Y TAAL T LF +G CG C+EL+C P WCNPG+P+++IT TN CPPN+ P+D+GGWCNPPR HFD+A P FLKLAQ AGIVPV YRRVPC++ GG+RF + G Y+ L+ V NV GAGD+ +SV Sbjct: 52 WHDGSATFYGDPSGMGDDFGGACGYVSNDIVSLYSTKTAALSTPLFADGNGCGQCYELRCVKSP-WCNPGSPSVVITGTNLCPPNWYLPNDDGGWCNPPRHHFDMAPPSFLKLAQRVAGIVPVQYRRVPCQRTGGVRFCLQGNHYWLLLYVMNVGGAGDVSSLSV 215
BLAST of EY705312 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 171.014 bits (432), Expect = 5.043e-49 Identity = 85/163 (52.15%), Postives = 106/163 (65.03%), Query Frame = 1 Query: 178 WQSAHATFYGGSDASGT-MGGACGYGNLYSQGYGVNTAALXTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVS 663 W A A +YG GT + GACGYG+L GYG+ TAAL TALFN+G SCGAC+E+ C +PQ C G+ I ITAT+ CPP A WC P HFDL++PMF+K+AQ +A +VPV YRRVPC K GG++F + G +L NV GAGDI+ VS Sbjct: 45 WYDARAAYYGDIHGGGTELEGACGYGDLNKHGYGLATAALSTALFNSGASCGACYEIMCSPNPQGCLSGS--IKITATDLCPPGSA-------WCYLPNKHFDLSLPMFIKIAQVKAKMVPVRYRRVPCAKTGGVKFEVKGNPNILTILPYNVGGAGDIIAVS 198 HSP 2 Score: 45.4394 bits (106), Expect = 5.043e-49 Identity = 19/33 (57.58%), Postives = 23/33 (69.70%), Query Frame = 3 Query: 678 TQWLSMSRNWGQNWQSNSQLVGQALSFRSTGSD 776 T W+ MSR WGQNW +N L GQ++S R T SD Sbjct: 204 TAWVVMSRYWGQNWTTNVNLTGQSVSLRVTTSD 236
BLAST of EY705312 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.009e-46 Identity = 74/165 (44.85%), Postives = 107/165 (64.85%), Query Frame = 1 Query: 178 WQSAHATFYGGSDASGTM--GGACGYGNLYSQGYGVNTAALXTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSV 666 W+ A AT D S ++ GGACGYG+L + +A L LFN G SCGAC E++C +WC G+P++++TAT+FCPPN SD GGWCN P+ H +L+ F +A+ RA ++P+ YRRV C +RGG+RF+++G +F VL++NV G++V V V Sbjct: 28 WKIATATLSRDRDGSSSVATGGACGYGDLRQSSFAGYSAGLSGKLFNRGSSCGACLEVRCVNHIRWCLQGSPSVVVTATDFCPPNSGLSSDYGGWCNFPKEHLELSHAAFTGIAETRAEMIPIQYRRVKCGRRGGLRFSLSGSSHFFQVLISNVGLDGEVVGVKV 192 HSP 2 Score: 47.3654 bits (111), Expect = 1.009e-46 Identity = 18/30 (60.00%), Postives = 23/30 (76.67%), Query Frame = 3 Query: 678 TQWLSMSRNWGQNWQSNSQLVGQALSFRST 767 T W+ M+RNWGQNW S+ L+GQ+LSF T Sbjct: 197 TAWIPMARNWGQNWHSSLDLIGQSLSFEVT 226
BLAST of EY705312 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 1.187e-44 Identity = 70/145 (48.28%), Postives = 95/145 (65.52%), Query Frame = 1 Query: 232 GGACGYGNLYSQGYGVNTAALXTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSV 666 GGACGYG+L YG TA + ALF G +CG C+E++C WC G+P +++TAT+FC PN D GGWCN P+ HF+++ FL++A+ +A IVPV +RRV C + GG+RFTI G F VL+TNVA G++ V V Sbjct: 52 GGACGYGDLDIFRYGRYTAGVSGALFGRGSACGGCYEVRCVNHVLWCLRGSPTVVVTATDFCAPNLGLSDDYGGWCNFPKEHFEMSEAAFLRVAKAKADIVPVQFRRVSCDRAGGMRFTITGGASFLQVLITNVAADGEVAAVKV 196 HSP 2 Score: 47.3654 bits (111), Expect = 1.187e-44 Identity = 20/35 (57.14%), Postives = 23/35 (65.71%), Query Frame = 3 Query: 678 TQWLSMSRNWGQNWQSNSQLVGQALSFRSTGSDRR 782 T W+ M RNWGQNWQ ++ L GQ LSF TG R Sbjct: 201 TGWIPMGRNWGQNWQCDADLRGQPLSFEVTGGRGR 235
BLAST of EY705312 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 3.705e-43 Identity = 89/179 (49.72%), Postives = 114/179 (63.69%), Query Frame = 1 Query: 145 AKIPGVFAG----GPWQSAHATFYGGSDASGTM-GGACGYGNLYSQGYGVNTAALXTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSV 666 AK+P V G GPW HATFYGG DASGT GGACGY + + GYG TAA+ ALF+NG CGAC+ELK GD +++TATN PP NG HFDL MP FL +A+ + G+VPVSYR+V C ++GGI++TI G +N+V+V NV GAGD+V+++V Sbjct: 67 AKMPHVNHGRYKCGPWVDGHATFYGGRDASGTTEGGACGYKD--ADGYGAMTAAVSPALFDNGAGCGACYELK--GD------SGKTVVVTATNQAPPPV-----NG----MKGEHFDLTMPAFLSIAEEKLGVVPVSYRKVACVRQGGIKYTITGNPSYNMVMVKNVGGAGDVVKLTV 226 HSP 2 Score: 38.891 bits (89), Expect = 3.705e-43 Identity = 15/42 (35.71%), Postives = 26/42 (61.90%), Query Frame = 3 Query: 681 QWLSMSRNWGQNWQSNSQLVGQALSFRSTGSDRRPSPLXTWR 806 +W + R+WGQ W++ + L G++L+FR D R + +WR Sbjct: 233 KWTPLQRSWGQLWKTEANLTGESLTFRVMTGDHRKA--TSWR 272
BLAST of EY705312 vs. ExPASy Swiss-Prot
Match: EXPB5_ORYSJ (Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXPB5 PE=2 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 1.997e-19 Identity = 58/176 (32.95%), Postives = 87/176 (49.43%), Query Frame = 1 Query: 169 GGPWQSAHATFYGGSDASGTMGGACGYGNLYSQ-GYGVNTAALXTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRGGIRFTINGFR--YFNLVLVTNVAGAGDIVRVSV 666 G W S AT+YGG G+ GGACGY + Q + AA +LF NG CG+C+++KC G+ + C+ G P + + T+ CP GG C HFD++ F +A AG++ + Y+RVPCR + F ++ Y+ +LV G GD+ V + Sbjct: 42 GYGWSSGGATWYGGPQGDGSEGGACGYQSAVGQRPFSSMIAAGGPSLFKNGKGCGSCYQIKCTGN-RACS-GRP-VTVVITDSCP---------GGVCLNEAAHFDMSGTAFGAMANRGMGDRLRSAGVLKIQYKRVPCRFAMNVAFKVDAGSNPYYLAILVQYANGDGDLAAVHI 205 HSP 2 Score: 25.7942 bits (55), Expect = 1.997e-19 Identity = 10/24 (41.67%), Postives = 15/24 (62.50%), Query Frame = 3 Query: 684 WLSMSRNWGQNWQSNSQLVGQALS 755 W +M ++WG W+ NS G+ LS Sbjct: 214 WKAMQQSWGATWRLNSN-TGKPLS 236 The following BLAST results are available for this feature:
BLAST of EY705312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >EY705312 ID=EY705312; Name=EY705312; organism=Citrus sinensis; type=EST; length=888bpback to top |