EY705312
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY705312 vs. ExPASy Swiss-Prot
Match: EXPB2_ARATH (Putative expansin-B2 OS=Arabidopsis thaliana GN=EXPB2 PE=2 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 1.760e-12 Identity = 55/174 (31.61%), Postives = 82/174 (47.13%), Query Frame = 1 Query: 178 WQSAHATFYGGSDASGTMGGACGYGNLYSQ-GYGVNTAALXTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLA------QYR-AGIVPVSYRRVPCRKRG-GIRFTINGFRYFN--LVLVTNVAGAGDIVRVSV 666 W A +T+YG G+ GGACGYGN +Q + +A +LF +G CGAC+++KC C+ NP + + T+ CP C HFDL+ F +A Q R G + + Y++V C G + F ++ N VLV V G G+I R+ + Sbjct: 47 WSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQVKCTSKSA-CSK-NP-VTVVITDECP-----------GCVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQILYKKVECNYIGKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRIEL 206 HSP 2 Score: 26.5646 bits (57), Expect = 1.760e-12 Identity = 13/30 (43.33%), Postives = 19/30 (63.33%), Query Frame = 3 Query: 681 QWLSMSRNWGQNWQSN-SQLVGQALSFRST 767 +WLSMS++WG W+ + S + LS R T Sbjct: 214 KWLSMSQSWGAVWKLDVSSPLRAPLSLRVT 243
BLAST of EY705312 vs. ExPASy Swiss-Prot
Match: EXPB9_MAIZE (Expansin-B9 OS=Zea mays GN=EXPB9 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.760e-12 Identity = 59/180 (32.78%), Postives = 84/180 (46.67%), Query Frame = 1 Query: 172 GPWQSAHATFYGGSDASGTM--GGACGYGNLYSQGYGVNTAALXTALFNNGLSCGACFELKCGGDPQWCNPGNP-AILITATNFCPPNFAQPSDNGGWCNPPRP-HFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRGGIRFTINGFRYFN----LVLVTNVAGAGDIVRVSV 666 G W +A AT+YG + +G GGACG N+ Y TA +F +G CG+C+E++C P+ C+ GNP + IT N+ P P HFDL+ F LA+ GI+ V +RRV C+ G + + + N VLV VA GDIV + + Sbjct: 41 GKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPE-CS-GNPVTVFITDMNY---------------EPIAPYHFDLSGKAFGSLAKPGLNDKLRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYVAVLVKFVADDGDIVLMEI 203 HSP 2 Score: 20.4014 bits (41), Expect = 1.760e-12 Identity = 5/19 (26.32%), Postives = 11/19 (57.89%), Query Frame = 3 Query: 675 NTQWLSMSRNWGQNWQSNS 731 + +W M +WG W+ ++ Sbjct: 208 SAEWKPMKLSWGAIWRMDT 226
BLAST of EY705312 vs. ExPASy Swiss-Prot
Match: EXPB1_MAIZE (Expansin-B1 OS=Zea mays GN=EXPB1 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.760e-12 Identity = 59/180 (32.78%), Postives = 84/180 (46.67%), Query Frame = 1 Query: 172 GPWQSAHATFYGGSDASGTM--GGACGYGNLYSQGYGVNTAALXTALFNNGLSCGACFELKCGGDPQWCNPGNP-AILITATNFCPPNFAQPSDNGGWCNPPRP-HFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRGGIRFTINGFRYFN----LVLVTNVAGAGDIVRVSV 666 G W +A AT+YG + +G GGACG N+ Y TA +F +G CG+C+E++C P+ C+ GNP + IT N+ P P HFDL+ F LA+ GI+ V +RRV C+ G + + + N VLV VA GDIV + + Sbjct: 41 GKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPE-CS-GNPVTVYITDMNY---------------EPIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKYVADDGDIVLMEI 203 HSP 2 Score: 20.4014 bits (41), Expect = 1.760e-12 Identity = 5/19 (26.32%), Postives = 11/19 (57.89%), Query Frame = 3 Query: 675 NTQWLSMSRNWGQNWQSNS 731 + +W M +WG W+ ++ Sbjct: 208 SAEWKPMKLSWGAIWRMDT 226
BLAST of EY705312 vs. ExPASy Swiss-Prot
Match: EXPB6_ORYSJ (Expansin-B6 OS=Oryza sativa subsp. japonica GN=EXPB6 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.280e-12 Identity = 52/178 (29.21%), Postives = 81/178 (45.51%), Query Frame = 1 Query: 169 GGPWQSAHATFYGGSDASGT--MGGACGYGNLYSQGYGVNTAALXTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRG-GIRFTI--NGFRYFNLVLVTNVAGAGDIVRVSV 666 G W A AT+YG +G GGACG+ N+ + T+ +F +G CG+C++++C DP C+ ++IT N+ P R HFDL+ F +A+ +GI+ + +RRVPC G I F + + VLV GD+V+V + Sbjct: 41 GSGWLPARATWYGAPTGAGPDDNGGACGFKNVNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCNKDPS-CSGNIETVIITDMNYYP--------------VARYHFDLSGTAFGAMAKPGLNDKLRHSGIIDIQFRRVPCNYPGLKINFHVEEGSNPVYFAVLVEYEDLDGDVVQVDL 203
BLAST of EY705312 vs. ExPASy Swiss-Prot
Match: EXPB4_ARATH (Expansin-B4 OS=Arabidopsis thaliana GN=EXPB4 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.280e-12 Identity = 58/173 (33.53%), Postives = 82/173 (47.40%), Query Frame = 1 Query: 184 SAHATFYGGSDASGTMGGACGYGNLYSQG--YGVNTAALXTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDL---AMPMFLKLAQ----YRAGIVPVSYRRVPCRKRGG---IRFTINGFRYFNLVLVTNVAGAGDIVRVSV 666 +A T+YG +G+ GGACGYG+ + Y + +A +LFNNG CG C+++ C G P C+ G+P I +T T+ CP GG C H DL AM K Q AG++ V+Y+R C RG R Y+ +V G GD+ V + Sbjct: 35 TAGVTWYGEPFGAGSTGGACGYGSAVANPPLYAMVSAG-GPSLFNNGKGCGTCYQVVCIGHPA-CS-GSP-ITVTITDECP---------GGPCASEPVHIDLSGKAMGALAKPGQADQLRSAGVIRVNYKRAACLYRGTNIVFRMDAGANPYYISFVVEYENGDGDLSNVEI 194
BLAST of EY705312 vs. ExPASy Swiss-Prot
Match: EXPB2_ORYSJ (Expansin-B2 OS=Oryza sativa subsp. japonica GN=EXPB2 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 2.280e-12 Identity = 47/148 (31.76%), Postives = 69/148 (46.62%), Query Frame = 1 Query: 157 GVFAGGPWQSAHATFYGGSDASGT--MGGACGYGNLYSQGYGVNTAALXTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRG 573 GV W A AT+YG + +G GGACG+ N + T+ LF +G CGAC++++C +P C+ ++IT N+ P R HFDL+ F +A+ AGI+ + +RRVPC RG Sbjct: 24 GVVYTNDWLPAKATWYGQPNGAGPDDNGGACGFKNTNQYPFMSMTSCGNEPLFQDGKGCGACYQIRCTNNPS-CSGQPRTVIITDMNYYP--------------VARYHFDLSGTAFGAMARPGLNDQLRHAGIIDIQFRRVPCYHRG 156
BLAST of EY705312 vs. ExPASy Swiss-Prot
Match: EXB10_MAIZE (Expansin-B10 OS=Zea mays GN=EXPB10 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.978e-12 Identity = 60/179 (33.52%), Postives = 82/179 (45.81%), Query Frame = 1 Query: 169 GGPWQSAHATFYGGSDASGT--MGGACGYGNLYSQGYGVNTAALXTALFNNGLSCGACFELKCGGDPQWCNPGNPAIL-ITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRGGIRFTIN---GFRYFNLVLVTNVAGAGDIVRVSV 666 G W A AT+YG +G GG CGY ++ + A +F +GL CG+CFE+KC P C+ G P ++ IT N+ P HFDLA F +A+ +AGI+ + +RRV C+ + F + G Y L LV V G GDIV V V Sbjct: 47 GKDWLDAKATWYGKPTGAGPDDNGGGCGYKDVNKPPFNSMGACGNIPIFKDGLGCGSCFEIKC-DKPVECS-GKPVVVHITDMNYEP--------------IAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKYDSKVTFHLEKGCGPNYLAL-LVKYVDGDGDIVAVDV 208
BLAST of EY705312 vs. ExPASy Swiss-Prot
Match: EXB11_MAIZE (Expansin-B11 OS=Zea mays GN=EXPB11 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.079e-12 Identity = 55/177 (31.07%), Postives = 78/177 (44.07%), Query Frame = 1 Query: 169 GGPWQSAHATFYGGSDASGT--MGGACGYGNLYSQGYGVNTAALXTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRGGIRFTINGFRYFN--LVLVTNVAGAGDIVRVSV 666 G W A AT+YG +G GG CGY ++ + A +F +GL CG+CFE+KC P C+ + IT N+ P HFDLA F +A+ +AGI+ + +RRV C+ + F + N +LV V G GDIV V + Sbjct: 46 GSDWLDAKATWYGKPTGAGPDDNGGGCGYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEIKC-DKPAECSGKPVVVYITDMNYEP--------------IAAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKYGSKVTFHLEKGCNPNYLALLVKYVDGDGDIVAVDI 207
BLAST of EY705312 vs. ExPASy Swiss-Prot
Match: EXPB9_ORYSJ (Expansin-B9 OS=Oryza sativa subsp. japonica GN=EXPB9 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 8.664e-12 Identity = 53/177 (29.94%), Postives = 81/177 (45.76%), Query Frame = 1 Query: 175 PWQSAHATFYGGSDASGTM--GGACGYGNLYSQGYGVNTAALXTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLA-------QYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFN----LVLVTNVAGAGDIVRVSV 666 PW A AT+YG SG+ GGACG N+ Y + +F +G CG+C+E+KC P C+ + IT N+ P + HFD + F +A +AGI+ + +RRV C+ GG + T + + N VLV VA GD++++ + Sbjct: 42 PWLPARATWYGQPYGSGSTDNGGACGIKNVNLPPYNGMISCGNVPIFKDGRGCGSCYEVKC-EQPAACSKQPVTVFITDMNYEPIS--------------AYHFDFSGKAFGAMACPGKETELRKAGIIDMQFRRVRCKYPGGQKVTFHVEKGSNPNYLAVLVKFVADDGDVIQMDL 203
BLAST of EY705312 vs. ExPASy Swiss-Prot
Match: EXPB3_ORYSJ (Expansin-B3 OS=Oryza sativa subsp. japonica GN=EXPB3 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 8.664e-12 Identity = 50/176 (28.41%), Postives = 82/176 (46.59%), Query Frame = 1 Query: 178 WQSAHATFYGGSDASGTM--GGACGYGNLYSQGYGVNTAALXTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRGGIRFTINGFRYFN----LVLVTNVAGAGDIVRVSV 666 W+ A AT+YG +G GGACG+ N + T+ +F +G CG+C++++C P C+ ++IT N+ P + + HFDL+ F +A+ AGI+ + ++RVPC G++ T + N VLV G GD+V+V + Sbjct: 42 WEVARATWYGAPTGAGPDDDGGACGFKNTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCVNHPA-CSGNPETVIITDMNYYPVS--------------KYHFDLSGTAFGAMAKPGQNDQLRHAGIIDIQFKRVPC-NFPGLKVTFHVEEGSNPVYFAVLVEYEDGDGDVVQVDL 201 The following BLAST results are available for this feature:
BLAST of EY705312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >EY705312 ID=EY705312; Name=EY705312; organism=Citrus sinensis; type=EST; length=888bpback to top |