EY705311
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS8_NICPL (Ribulose bisphosphate carboxylase small chain 8B, chloroplastic OS=Nicotiana plumbaginifolia GN=RBCS-8B PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 6.487e-65 Identity = 112/151 (74.17%), Postives = 132/151 (87.42%), Query Frame = 1 Query: 100 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552 MASS++SSA VAT R+++AQA+MVAPFTGLKS+++FP ++K N DITSIASNGGRVQCM+VWPP KK+ETLSYLP LS E LL EI YL++SGW+PCLEFE E+G+VYREHH SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K Sbjct: 1 MASSVLSSAAVAT--RSNVAQANMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSQEQLLSEIEYLLKSGWVPCLEFETERGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKK 149 HSP 2 Score: 29.6462 bits (65), Expect = 6.487e-65 Identity = 13/15 (86.67%), Postives = 13/15 (86.67%), Query Frame = 2 Query: 596 RQVQCISFIAAKPPG 640 RQVQCISFIA KP G Sbjct: 165 RQVQCISFIAYKPEG 179
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS0_SOLTU (Ribulose bisphosphate carboxylase small chain C, chloroplastic OS=Solanum tuberosum GN=RBCS-C PE=2 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 1.875e-64 Identity = 111/151 (73.51%), Postives = 133/151 (88.08%), Query Frame = 1 Query: 100 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNN-DITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQ 549 MASS++SSA VAT R+++AQASMVAPFTGLKS+++FP TKK NN DITS+ASNGGRV+CM+VWPP +KK+ETLSYLP LSDE LLKE+ YL+++GW+PCLEFE E G+VYREH+ SPGYYDGRYWTMWKLPM+GCTD TQVL EV E + Sbjct: 1 MASSIVSSAAVAT--RSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYREHNSSPGYYDGRYWTMWKLPMFGCTDGTQVLAEVQEAK 149 HSP 2 Score: 29.6462 bits (65), Expect = 1.875e-64 Identity = 13/15 (86.67%), Postives = 13/15 (86.67%), Query Frame = 2 Query: 596 RQVQCISFIAAKPPG 640 RQVQCISFIA KP G Sbjct: 166 RQVQCISFIAYKPEG 180
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS3B_SOLLC (Ribulose bisphosphate carboxylase small chain 3B, chloroplastic OS=Solanum lycopersicum GN=RBCS-3B PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 1.875e-64 Identity = 112/151 (74.17%), Postives = 131/151 (86.75%), Query Frame = 1 Query: 100 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552 MASS++SSA VAT R + AQASMVAPFTGLKS+++FP ++K N DITSIASNGGRV CM+VWPP +KK+ETLSYLP LSDE LL EI YL+++GW+PCLEFE E G+VYRE+HKSPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K Sbjct: 1 MASSIVSSAAVAT--RGNGAQASMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKK 149 HSP 2 Score: 29.6462 bits (65), Expect = 1.875e-64 Identity = 13/15 (86.67%), Postives = 13/15 (86.67%), Query Frame = 2 Query: 596 RQVQCISFIAAKPPG 640 RQVQCISFIA KP G Sbjct: 165 RQVQCISFIAYKPEG 179
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS3B_ARATH (Ribulose bisphosphate carboxylase small chain 3B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-3B PE=1 SV=2) HSP 1 Score: 237.269 bits (604), Expect = 2.445e-64 Identity = 113/152 (74.34%), Postives = 129/152 (84.87%), Query Frame = 1 Query: 100 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKD 555 MASSM+SSA V T S AQA+MVAPFTGLKSS+AFP T+KTN DITSIASNGGRV CMKVWPP G KKFETLSYLP LSD L KE++YL+R+ WIPC+EFELE G+VYREH +PGYYDGRYWTMWKLP++GCTD+ QVLKEV E +K+ Sbjct: 1 MASSMLSSAAVVT----SPAQATMVAPFTGLKSSAAFPVTRKTNKDITSIASNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKE 148 HSP 2 Score: 30.4166 bits (67), Expect = 2.445e-64 Identity = 13/14 (92.86%), Postives = 13/14 (92.86%), Query Frame = 2 Query: 596 RQVQCISFIAAKPP 637 RQVQCISFIA KPP Sbjct: 163 RQVQCISFIAYKPP 176
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBSB_SOLTU (Ribulose bisphosphate carboxylase small chain 2B, chloroplastic OS=Solanum tuberosum GN=RBCS-2B PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 3.189e-64 Identity = 111/151 (73.51%), Postives = 133/151 (88.08%), Query Frame = 1 Query: 100 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552 MASS++SSA VAT RA+ AQASMV PFTGLKS+++FP ++K N DITSIASNGGRV+CM+VWPP +KK+ETLSYLP LSDE LLKE+ YL+++GW+PCLEFE E G+VYRE++KSPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K Sbjct: 1 MASSIVSSAAVAT--RANGAQASMVGPFTGLKSTASFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKK 149 HSP 2 Score: 29.6462 bits (65), Expect = 3.189e-64 Identity = 13/15 (86.67%), Postives = 13/15 (86.67%), Query Frame = 2 Query: 596 RQVQCISFIAAKPPG 640 RQVQCISFIA KP G Sbjct: 165 RQVQCISFIAYKPEG 179
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS3A_SOLLC (Ribulose bisphosphate carboxylase small chain 3A/3C, chloroplastic OS=Solanum lycopersicum GN=RBCS-3A/3C PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 3.189e-64 Identity = 112/151 (74.17%), Postives = 131/151 (86.75%), Query Frame = 1 Query: 100 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552 MASS++SSA VAT R + AQASMVAPFTGLKS+++FP ++K N DITSIASNGGRV CM+VWPP +KK+ETLSYLP LSDE LL EI YL+++GW+PCLEFE E G+VYRE+HKSPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K Sbjct: 1 MASSVMSSAAVAT--RGNGAQASMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKK 149 HSP 2 Score: 29.6462 bits (65), Expect = 3.189e-64 Identity = 13/15 (86.67%), Postives = 13/15 (86.67%), Query Frame = 2 Query: 596 RQVQCISFIAAKPPG 640 RQVQCISFIA KP G Sbjct: 165 RQVQCISFIAYKPEG 179
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS1_SOYBN (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Glycine max GN=RBCS-1 PE=3 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 3.189e-64 Identity = 113/150 (75.33%), Postives = 125/150 (83.33%), Query Frame = 1 Query: 100 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQ 549 MASSMISS V T NRA A MVAPFTGLKS + FP T+KTNNDITSIASNGGRVQCM+VWPP G KKFETLSYLP L D L KE+ YL+R GWIPCLEFELE G+VYREH++SP YYDGRYWTMWKLPM+GCTDA+QVLKE+ E + Sbjct: 1 MASSMISSPAVTTVNRAG---AGMVAPFTGLKSMAGFP-TRKTNNDITSIASNGGRVQCMQVWPPIGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHNRSPXYYDGRYWTMWKLPMFGCTDASQVLKELQEAK 146 HSP 2 Score: 32.7278 bits (73), Expect = 3.189e-64 Identity = 14/15 (93.33%), Postives = 14/15 (93.33%), Query Frame = 2 Query: 596 RQVQCISFIAAKPPG 640 RQVQCISFIA KPPG Sbjct: 163 RQVQCISFIAYKPPG 177
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS1_SOLLC (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Solanum lycopersicum GN=RBCS-1 PE=2 SV=2) HSP 1 Score: 237.269 bits (604), Expect = 4.157e-64 Identity = 111/152 (73.03%), Postives = 134/152 (88.16%), Query Frame = 1 Query: 100 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNN-DITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552 MASS++SSA AT R+++AQASMVAPFTGLKS+++FP TKK NN DITS+ASNGGRV+CM+VWPP +KK+ETLSYLP LSDE LL EI YL+++GW+PCLEFE E+G+VYRE++ SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K Sbjct: 1 MASSIVSSAAAAT--RSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETERGFVYRENNSSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKK 150 HSP 2 Score: 29.6462 bits (65), Expect = 4.157e-64 Identity = 13/15 (86.67%), Postives = 13/15 (86.67%), Query Frame = 2 Query: 596 RQVQCISFIAAKPPG 640 RQVQCISFIA KP G Sbjct: 166 RQVQCISFIAYKPEG 180
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS2_PETHY (Ribulose bisphosphate carboxylase small chain SSU11A, chloroplastic OS=Petunia hybrida GN=RBCS PE=3 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 4.158e-64 Identity = 111/151 (73.51%), Postives = 129/151 (85.43%), Query Frame = 1 Query: 100 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552 MASS++SSA VAT+ A AQASMVAPFTGLKS+++FP ++K N DITSIASNGGRVQCM+VWPP G KK+ETLSYLP L+DE LLKEI YL+ GW+PCLEFE E G+VYRE+H SP YYDGRYWTMWKLPM+GCTDATQVL E+ E +K Sbjct: 1 MASSVMSSAAVATSTNA--AQASMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPYGKKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEFETEHGFVYREYHASPRYYDGRYWTMWKLPMFGCTDATQVLGELQEAKK 149 HSP 2 Score: 32.7278 bits (73), Expect = 4.158e-64 Identity = 14/15 (93.33%), Postives = 14/15 (93.33%), Query Frame = 2 Query: 596 RQVQCISFIAAKPPG 640 RQVQCISFIA KPPG Sbjct: 165 RQVQCISFIAYKPPG 179
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS_RAPSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Raphanus sativus GN=RBCS PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 5.421e-64 Identity = 112/152 (73.68%), Postives = 128/152 (84.21%), Query Frame = 1 Query: 100 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKD 555 MASSM+SSA V T S QA+MVAPFTGLKSS+AFP T+KTN DITSIASNGGRV CMKVWPP G KKFETLSYLP LSD L KE++YL+R+ WIPC+EFELE G+VYREH +PGYYDGRYWTMWKLP++GCTD+ QVLKEV E +K+ Sbjct: 1 MASSMLSSAAVVT----SQLQATMVAPFTGLKSSAAFPVTRKTNTDITSIASNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKKE 148 HSP 2 Score: 30.8018 bits (68), Expect = 5.421e-64 Identity = 13/16 (81.25%), Postives = 14/16 (87.50%), Query Frame = 2 Query: 590 HKRQVQCISFIAAKPP 637 + RQVQCISFIA KPP Sbjct: 161 NNRQVQCISFIAYKPP 176 The following BLAST results are available for this feature:
BLAST of EY705311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >EY705311 ID=EY705311; Name=EY705311; organism=Citrus sinensis; type=EST; length=944bpback to top |