EY705311
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS1_NICSY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Nicotiana sylvestris GN=RBCS PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 3.476e-63 Identity = 109/151 (72.19%), Postives = 132/151 (87.42%), Query Frame = 1 Query: 100 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552 MASS++SSA VAT R+++AQA+MVAPFTGLKS+++FP ++K N DITSIASNGGRVQCM+VWPP KK+ETLSYLP LS E LL E+ YL+++GW+PCLEFE E G+VYRE++KSPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K Sbjct: 1 MASSVLSSAAVAT--RSNVAQANMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSQEQLLSEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKK 149 HSP 2 Score: 29.6462 bits (65), Expect = 3.476e-63 Identity = 13/15 (86.67%), Postives = 13/15 (86.67%), Query Frame = 2 Query: 596 RQVQCISFIAAKPPG 640 RQVQCISFIA KP G Sbjct: 165 RQVQCISFIAYKPEG 179
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS1_MESCR (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-1 PE=2 SV=2) HSP 1 Score: 234.958 bits (598), Expect = 4.531e-63 Identity = 110/151 (72.85%), Postives = 129/151 (85.43%), Query Frame = 1 Query: 100 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552 MASSM+SSA VAT NR AQASMVAPF GLKS +AFP TKK NNDITS+A+NGGRVQCM+VWPP G KKFETLSYLPPLS+E+L+KE+ YL+ +GW+PCLEFE G+VYREH +PGYYDGRYWTMWKLPM+GCTD +QV+ E+ E +K Sbjct: 1 MASSMVSSAAVATVNRTP-AQASMVAPFNGLKSVAAFPVTKK-NNDITSVATNGGRVQCMQVWPPLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKK 149 HSP 2 Score: 28.4906 bits (62), Expect = 4.531e-63 Identity = 12/28 (42.86%), Postives = 19/28 (67.86%), Query Frame = 3 Query: 555 YPHSFVRIIGFDT--SVKCSASVSLLPS 632 YP +F+RIIGFD V+C + ++ P+ Sbjct: 151 YPEAFIRIIGFDNVRQVQCISFIAYKPA 178
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS2B_ARATH (Ribulose bisphosphate carboxylase small chain 2B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-2B PE=2 SV=2) HSP 1 Score: 232.646 bits (592), Expect = 5.908e-63 Identity = 110/152 (72.37%), Postives = 126/152 (82.89%), Query Frame = 1 Query: 100 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKD 555 MASSM SS V T S AQA+MVAPFTGLKSS++FP T+K NNDITSI SNGGRV CMKVWPP G KKFETLSYLP LSD L KE++YL+R+ WIPC+EFELE G+VYREH +PGYYDGRYWTMWKLP++GCTD+ QVLKEV E +K+ Sbjct: 1 MASSMFSSTAVVT----SPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKE 148 HSP 2 Score: 30.4166 bits (67), Expect = 5.908e-63 Identity = 13/14 (92.86%), Postives = 13/14 (92.86%), Query Frame = 2 Query: 596 RQVQCISFIAAKPP 637 RQVQCISFIA KPP Sbjct: 163 RQVQCISFIAYKPP 176
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS2_BRANA (Ribulose bisphosphate carboxylase small chain F1, chloroplastic OS=Brassica napus GN=RBCS F1 PE=3 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 7.703e-63 Identity = 110/152 (72.37%), Postives = 128/152 (84.21%), Query Frame = 1 Query: 100 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKD 555 MASSM+SSA V T S AQA+MVAPFTGLKSS+AFP T+K NNDITSIASNGGRV CMKVWPP G KKFETLSYLP L++ L KE++YL+R+ WIPC+EFELE G+VYREH +PGYYDGRYWTMWKLP++GCTD+ QVLKEV E + + Sbjct: 1 MASSMLSSAAVVT----SPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWPPVGKKKFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKTE 148 HSP 2 Score: 30.8018 bits (68), Expect = 7.703e-63 Identity = 13/16 (81.25%), Postives = 14/16 (87.50%), Query Frame = 2 Query: 590 HKRQVQCISFIAAKPP 637 + RQVQCISFIA KPP Sbjct: 161 NNRQVQCISFIAYKPP 176
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS_STELP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Stellaria longipes GN=RBCS PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 7.706e-63 Identity = 113/158 (71.52%), Postives = 133/158 (84.18%), Query Frame = 1 Query: 100 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK---DTHI 564 MASS++SSA VAT R++ AQASMVAPFTGLKS+++FP ++KTN DITSIASNGGRV+CM+VWPP +KK+ETLSYLP LS E LL EI YL+++GW+PCLEFE E G+VYREH SPGYYDGRYWTMWKLPM+GCTDATQV EV E +K D HI Sbjct: 1 MASSIMSSAAVAT--RSNGAQASMVAPFTGLKSNASFPVSRKTNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSSEQLLSEIEYLLKNGWVPCLEFETEHGFVYREHTSSPGYYDGRYWTMWKLPMFGCTDATQVAAEVQEAKKAYPDAHI 156 HSP 2 Score: 27.7202 bits (60), Expect = 7.706e-63 Identity = 12/13 (92.31%), Postives = 12/13 (92.31%), Query Frame = 2 Query: 596 RQVQCISFIAAKP 634 RQVQCISFIA KP Sbjct: 165 RQVQCISFIAYKP 177
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS_CAPAN (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 1.004e-62 Identity = 110/151 (72.85%), Postives = 129/151 (85.43%), Query Frame = 1 Query: 100 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552 MASS++S+ATVAT A+ AQASM+A F GLKS+++FP T+K + DITSIASNGGRV+CM VWPP KK+ETLSYLP LSDE LLKEI YL++ GW+PCLEFE E G+VYREHH+SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K Sbjct: 1 MASSVMSTATVATG--ANAAQASMIASFNGLKSAASFPVTRKQDLDITSIASNGGRVECMLVWPPINKKKYETLSYLPDLSDEQLLKEIEYLLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDATQVLNEVQEAKK 149 HSP 2 Score: 27.7202 bits (60), Expect = 1.004e-62 Identity = 12/13 (92.31%), Postives = 12/13 (92.31%), Query Frame = 2 Query: 596 RQVQCISFIAAKP 634 RQVQCISFIA KP Sbjct: 165 RQVQCISFIAYKP 177
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS1_BRANA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Brassica napus GN=RBCS PE=2 SV=2) HSP 1 Score: 231.491 bits (589), Expect = 1.004e-62 Identity = 110/152 (72.37%), Postives = 127/152 (83.55%), Query Frame = 1 Query: 100 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKD 555 MASSM+SSA V T S AQA+MVAPFTGLKSSSAFP T+K NNDITSI SNGGRV CMKVWPP G KKFETLSYLP L++ L KE++YL+R+ WIPC+EFELE G+VYREH +PGYYDGRYWTMWKLP++GCTD+ QVLKEV E + + Sbjct: 1 MASSMLSSAAVVT----SPAQATMVAPFTGLKSSSAFPVTRKANNDITSIVSNGGRVSCMKVWPPVGKKKFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKTE 148 HSP 2 Score: 30.8018 bits (68), Expect = 1.004e-62 Identity = 13/16 (81.25%), Postives = 14/16 (87.50%), Query Frame = 2 Query: 590 HKRQVQCISFIAAKPP 637 + RQVQCISFIA KPP Sbjct: 161 NNRQVQCISFIAYKPP 176
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS4_SOYBN (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Glycine max GN=RBCS-4 PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 1.310e-62 Identity = 112/150 (74.67%), Postives = 124/150 (82.67%), Query Frame = 1 Query: 100 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQ 549 MASSMISS V T NRA A MVAPFTGLKS + P T+KTNNDITSIASNGGRVQCM+VWPP G KKFETLSYLP L D L KE+ YL+R GWIPCLEFELE G+VYREH++S GYYDGRYWTMWKLPM+GCTDA+QVLKE+ E + Sbjct: 1 MASSMISSPAVTTVNRAG---AGMVAPFTGLKSMAGLP-TRKTNNDITSIASNGGRVQCMQVWPPVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYREHNRSLGYYDGRYWTMWKLPMFGCTDASQVLKELQEAK 146 HSP 2 Score: 30.4166 bits (67), Expect = 1.310e-62 Identity = 13/14 (92.86%), Postives = 13/14 (92.86%), Query Frame = 2 Query: 596 RQVQCISFIAAKPP 637 RQVQCISFIA KPP Sbjct: 163 RQVQCISFIAYKPP 176
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS6_MESCR (Ribulose bisphosphate carboxylase small chain 6, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-6 PE=3 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 2.226e-62 Identity = 106/153 (69.28%), Postives = 133/153 (86.93%), Query Frame = 1 Query: 100 MASSMISSATVAT--ANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552 MASSM+S+A VAT A+R++ AQASMVAPFTGLKS SAFP T+K++ND++++ SNGG+VQCM+VWPP G KKFETLSYLPPLS+E+LLKE+ YL+ +GW+PCLEFE G+VYREH +PGYYDGRYWTMWKLPM+GCTD +QV+ E+ E +K Sbjct: 1 MASSMLSNAAVATTAASRSAGAQASMVAPFTGLKSVSAFPVTRKSSNDLSTVPSNGGKVQCMQVWPPLGKKKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKK 153 HSP 2 Score: 28.4906 bits (62), Expect = 2.226e-62 Identity = 12/28 (42.86%), Postives = 19/28 (67.86%), Query Frame = 3 Query: 555 YPHSFVRIIGFDT--SVKCSASVSLLPS 632 YP +F+RIIGFD V+C + ++ P+ Sbjct: 155 YPEAFIRIIGFDNVRQVQCVSFIAYKPA 182
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS_GLYTO (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Glycine tomentella GN=RBCS PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 2.228e-62 Identity = 111/150 (74.00%), Postives = 124/150 (82.67%), Query Frame = 1 Query: 100 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQ 549 MASSMISS V T NRA A VAPFTGLKS + FP T+KTNNDI SIASNGGRVQCM+VWP TG KKFETLSYLP L D L KE+ YL+R GWIPCLEFELE G+VYRE+H+SPGYYDGRYWTMWKLP++GCTDA+QVLKE+ E + Sbjct: 1 MASSMISSPAVTTVNRAG---AGTVAPFTGLKSMAGFP-TRKTNNDIASIASNGGRVQCMQVWPTTGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPVFGCTDASQVLKELQEAK 146 HSP 2 Score: 30.4166 bits (67), Expect = 2.228e-62 Identity = 13/14 (92.86%), Postives = 13/14 (92.86%), Query Frame = 2 Query: 596 RQVQCISFIAAKPP 637 RQVQCISFIA KPP Sbjct: 163 RQVQCISFIAYKPP 176 The following BLAST results are available for this feature:
BLAST of EY705311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >EY705311 ID=EY705311; Name=EY705311; organism=Citrus sinensis; type=EST; length=944bpback to top |