EY705311
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS1_AMAHP (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Amaranthus hypochondriacus GN=RBCS1 PE=2 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 3.786e-62 Identity = 105/151 (69.54%), Postives = 123/151 (81.46%), Query Frame = 1 Query: 100 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552 MASSM+S+A +AT + AQASMVAPF GLKS + FP TKK++ND +S+ SNGGRVQCM+VWPP G KKFETLSYLPPLSD LL ++ YL+ GWIPC+EFELE +VYRE+H+SPGY DGRYWTMWKLPMYGCTD QVL EV E +K Sbjct: 1 MASSMLSNAAMATTAATAGAQASMVAPFNGLKSFATFPITKKSSNDFSSLPSNGGRVQCMQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEFELEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKK 151 HSP 2 Score: 31.5722 bits (70), Expect = 3.786e-62 Identity = 13/17 (76.47%), Postives = 15/17 (88.24%), Query Frame = 2 Query: 590 HKRQVQCISFIAAKPPG 640 +KRQVQC+SFIA KP G Sbjct: 165 NKRQVQCVSFIAYKPAG 181
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS4_MESCR (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-4 PE=2 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.427e-61 Identity = 105/151 (69.54%), Postives = 127/151 (84.11%), Query Frame = 1 Query: 100 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552 MASS++S+A A + AQA+MVAPF GLKS SAFP T+K NNDITS+ASNGGRVQCM+VWPP G+KKFETLSYLPPLS+E+LLKE+ YL+ +GW+PCLEFE G+VYREH +PGYYDGRYWTMWKLPM+GCTD +QV+ E+ E +K Sbjct: 1 MASSLMSNAATTMAAATTTAQANMVAPFNGLKSISAFPVTRK-NNDITSVASNGGRVQCMQVWPPLGMKKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKK 150 HSP 2 Score: 28.4906 bits (62), Expect = 1.427e-61 Identity = 12/28 (42.86%), Postives = 19/28 (67.86%), Query Frame = 3 Query: 555 YPHSFVRIIGFDT--SVKCSASVSLLPS 632 YP +F+RIIGFD V+C + ++ P+ Sbjct: 152 YPEAFIRIIGFDNVRQVQCVSFIAYKPA 179
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS3_PEA (Ribulose bisphosphate carboxylase small chain 3A, chloroplastic OS=Pisum sativum GN=RBCS-3A PE=3 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 1.427e-61 Identity = 107/147 (72.79%), Postives = 125/147 (85.03%), Query Frame = 1 Query: 106 SSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEV 546 +SMISS+ V T +RAS Q++ VAPF GLKS + FP KK N DITSI SNGGRV+CM+VWPP G KKFETLSYLPPL+ + LLKE+ YL+R GW+PCLEFELEKG+VYREH+KSPGYYDGRYWTMWKLPM+G TDA+QVLKE+ EV Sbjct: 2 ASMISSSAVTTVSRASTVQSAAVAPFGGLKSMTGFPV-KKVNTDITSITSNGGRVKCMQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELEKGFVYREHNKSPGYYDGRYWTMWKLPMFGTTDASQVLKELDEV 147 HSP 2 Score: 28.1054 bits (61), Expect = 1.427e-61 Identity = 13/27 (48.15%), Postives = 18/27 (66.67%), Query Frame = 3 Query: 555 YPHSFVRIIGFDT--SVKCSASVSLLP 629 YP +FVRIIGFD V+C + ++ P Sbjct: 151 YPQAFVRIIGFDNVRQVQCISFIAHTP 177
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS2_PEA (Ribulose bisphosphate carboxylase small chain 3C, chloroplastic OS=Pisum sativum GN=RBCS-3C PE=2 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.861e-61 Identity = 107/147 (72.79%), Postives = 125/147 (85.03%), Query Frame = 1 Query: 106 SSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEV 546 +SMISS+ V T +RAS Q++ VAPF GLKS + FP KK N DITSI SNGGRV+CM+VWPP G KKFETLSYLPPL+ + LLKE+ YL+R GW+PCLEFELEKG+VYREH+KSPGYYDGRYWTMWKLPM+G TDA+QVLKE+ EV Sbjct: 2 ASMISSSAVTTVSRASRGQSAAVAPFGGLKSMTGFPV-KKVNTDITSITSNGGRVKCMQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELEKGFVYREHNKSPGYYDGRYWTMWKLPMFGTTDASQVLKELDEV 147 HSP 2 Score: 28.1054 bits (61), Expect = 1.861e-61 Identity = 13/27 (48.15%), Postives = 18/27 (66.67%), Query Frame = 3 Query: 555 YPHSFVRIIGFDT--SVKCSASVSLLP 629 YP +FVRIIGFD V+C + ++ P Sbjct: 151 YPQAFVRIIGFDNVRQVQCISFIAHTP 177
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS3_AMAHP (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Amaranthus hypochondriacus GN=RBCS3 PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.861e-61 Identity = 107/151 (70.86%), Postives = 125/151 (82.78%), Query Frame = 1 Query: 100 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552 MASS++S+A A AS AQA+MVAPF GLKS ++FP T+K+N DITSIASNGGRVQCM+VWPP G KKFETLSYLPPLSD LL ++ YL+ +GWIPC+EFELE +VYRE+H+SPGY DGRYWTMWKLPMYGCTD QVL EV E +K Sbjct: 1 MASSLMSNAITAVVG-ASGAQANMVAPFNGLKSIASFPVTRKSN-DITSIASNGGRVQCMQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNNGWIPCIEFELEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKK 149 HSP 2 Score: 34.6538 bits (78), Expect = 1.861e-61 Identity = 14/17 (82.35%), Postives = 16/17 (94.12%), Query Frame = 2 Query: 590 HKRQVQCISFIAAKPPG 640 +KRQVQC+SFIA KPPG Sbjct: 163 NKRQVQCVSFIAFKPPG 179
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS2_NICSY (Ribulose bisphosphate carboxylase small chain S41, chloroplastic OS=Nicotiana sylvestris PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 4.125e-61 Identity = 105/147 (71.43%), Postives = 126/147 (85.71%), Query Frame = 1 Query: 112 MISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552 M S+A VAT A AQASM+APFTGLKS+++FP ++K N DITSIASNGGRVQCM+VWPP KK+ETLSYLP LS+E LL+E+ YL+++GW+PCLEFE E G+VYRE++KSPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K Sbjct: 6 MSSAAAVATGTNA--AQASMIAPFTGLKSATSFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSEEQLLREVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKK 150 HSP 2 Score: 29.6462 bits (65), Expect = 4.125e-61 Identity = 13/15 (86.67%), Postives = 13/15 (86.67%), Query Frame = 2 Query: 596 RQVQCISFIAAKPPG 640 RQVQCISFIA KP G Sbjct: 166 RQVQCISFIAYKPEG 180
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS3_MESCR (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-3 PE=2 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 7.012e-61 Identity = 104/151 (68.87%), Postives = 126/151 (83.44%), Query Frame = 1 Query: 100 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552 MASS++S+A A + AQA+MVAPF GLKS SAFP T+K NNDITS+ASNGGRVQCM+VWPP G KKFETLSYLPPLS+E+L+KE+ YL+ +GW+PCLEFE G+VYREH +PGYYDGRYWTMWKLPM+GCTD +QV+ E+ E +K Sbjct: 1 MASSLMSNAATTMAAATTTAQANMVAPFNGLKSVSAFPVTRK-NNDITSVASNGGRVQCMQVWPPLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKK 150 HSP 2 Score: 28.4906 bits (62), Expect = 7.012e-61 Identity = 12/28 (42.86%), Postives = 19/28 (67.86%), Query Frame = 3 Query: 555 YPHSFVRIIGFDT--SVKCSASVSLLPS 632 YP +F+RIIGFD V+C + ++ P+ Sbjct: 152 YPEAFIRIIGFDNVRQVQCISFIAYKPA 179
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS2_SPIOL (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Spinacia oleracea GN=RBCS2 PE=1 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 1.555e-60 Identity = 104/152 (68.42%), Postives = 128/152 (84.21%), Query Frame = 1 Query: 100 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKD 555 MASS++SSA VAT +R AQASMVAPFTGLKS+ FPATKK N+DITS+ASNGGRVQCMKVWP +K++ETLSYLPPL+ + L ++++YL+ + W+PCLEFE + G+VYREHH SPGYYDGRYWTMWKLPM+GCTD QVL E+ E +K+ Sbjct: 1 MASSVLSSAAVATVSRTP-AQASMVAPFTGLKSTVGFPATKK-NDDITSLASNGGRVQCMKVWPTQNMKRYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEFETDHGFVYREHHNSPGYYDGRYWTMWKLPMFGCTDPAQVLNELEECKKE 150 HSP 2 Score: 29.6462 bits (65), Expect = 1.555e-60 Identity = 12/28 (42.86%), Postives = 22/28 (78.57%), Query Frame = 3 Query: 555 YPHSFVRIIGFDTS--VKCSASVSLLPS 632 YP++F+RIIGFD++ V+C + ++ P+ Sbjct: 151 YPNAFIRIIGFDSNRQVQCVSFIAYKPA 178
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS_MUSAC (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Musa acuminata GN=RBCS1 PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 1.555e-60 Identity = 107/152 (70.39%), Postives = 128/152 (84.21%), Query Frame = 1 Query: 100 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKD 555 ++S M+SSA AT RAS AQ+SMVAPFTGLKS+SAFP T+K N D++ + SNGGRVQCMKVWP G+KKFETLSYLP + DEAL+K+I YL+RS WIPCLEF KG+V+RE+H+SPGYYDGRYWTMWKLPM+GCTDA QV KEV E +K+ Sbjct: 2 VSSMMVSSA--ATFTRASPAQSSMVAPFTGLKSASAFPVTRKPNADLSHLPSNGGRVQCMKVWPIEGVKKFETLSYLPTMKDEALVKQIEYLLRSKWIPCLEF-CPKGFVWRENHRSPGYYDGRYWTMWKLPMFGCTDAVQVAKEVEECKKE 150 HSP 2 Score: 31.9574 bits (71), Expect = 1.555e-60 Identity = 13/28 (46.43%), Postives = 21/28 (75.00%), Query Frame = 3 Query: 555 YPHSFVRIIGFDTS--VKCSASVSLLPS 632 YPH+F+RIIGFD + V+C + ++ P+ Sbjct: 151 YPHAFIRIIGFDNNRQVQCISFIAYKPT 178
BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS2_AMAHP (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Amaranthus hypochondriacus GN=RBCS2 PE=2 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 4.491e-60 Identity = 108/153 (70.59%), Postives = 125/153 (81.70%), Query Frame = 1 Query: 100 MASSMISSATVATANRASL--AQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552 MASSM+S+A A A A+ AQA+MVAPF GLKS ++FP T+K+N DITSIASNGGRVQCM+VWPP G KKFETLSYLPPLSD LL ++ YL+ GWIPC+EFELE +VYRE+H+SPGY DGRYWTMWKLPMYGCTD QVL EV E +K Sbjct: 1 MASSMMSNAATAVAVAATSGGAQANMVAPFNGLKSIASFPVTRKSN-DITSIASNGGRVQCMQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEFELEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKK 152 HSP 2 Score: 29.6462 bits (65), Expect = 4.491e-60 Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 2 Query: 590 HKRQVQCISFIAAKP 634 +KRQVQC+SFIA KP Sbjct: 166 NKRQVQCVSFIAYKP 180 The following BLAST results are available for this feature:
BLAST of EY705311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY705311 ID=EY705311; Name=EY705311; organism=Citrus sinensis; type=EST; length=944bpback to top |