EY705311 | Citrus Genome Database

Overview


Name	EY705311
Unique Name	EY705311
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	944

Libraries


Library Name	Type
Sweet orange fruit, development stadium (2 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS_AEGTA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Aegilops tauschii GN=RBCS PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 4.255e-48
Identity = 81/133 (60.90%), Postives = 106/133 (79.70%), Query Frame = 1

Query:  157 AQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKD 555
            + A+ VAPF GLKS++  P ++++N       SNGGR++CM+VWP  G+KKFETLSYLPPLS E LLK+++YLIRS W+PCLEF  + G+++REH+ SPGYYDGRYWTMWKLPM+GC   TQV+ EV EV+K+
Sbjct:    8 SSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEGLLKQVDYLIRSKWVPCLEFR-KVGFIFREHNVSPGYYDGRYWTMWKLPMFGCPAPTQVIPEVEEVRKE 139

HSP 2 Score: 29.6462 bits (65), Expect = 4.255e-48
Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 2

Query:  596 RQVQCISFIAAKPPG 640
            RQVQ +SFIA+KPPG
Sbjct:  154 RQVQSVSFIASKPPG 168

[Close]

BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS_MAIZE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 6.536e-46
Identity = 80/132 (60.61%), Postives = 106/132 (80.30%), Query Frame = 1

Query:  157 AQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552
            + A+ VAPF GLKS+++ P  ++++  + ++ SNGGR++CM+VWP  G KKFETLSYLPPLS + LLK+++YL+R+GWIPCLEF  + G+VYRE+  SP YYDGRYWTMWKLPM+GC DATQV KE+ E  K
Sbjct:    9 SSATAVAPFQGLKSTASLPVARRSSRSLGNV-SNGGRIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQVDYLLRNGWIPCLEFS-KVGFVYRENSTSPCYYDGRYWTMWKLPMFGCNDATQVYKELQEAIK 138

HSP 2 Score: 29.6462 bits (65), Expect = 6.536e-46
Identity = 11/15 (73.33%), Postives = 13/15 (86.67%), Query Frame = 2

Query:  596 RQVQCISFIAAKPPG 640
            +Q QC+SFIA KPPG
Sbjct:  154 KQTQCVSFIAYKPPG 168

[Close]

BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS_PINTH (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 5.090e-45
Identity = 80/142 (56.34%), Postives = 107/142 (75.35%), Query Frame = 1

Query:  139 ANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITS----IASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552
            A  A    A++V+ FTGLKS++ FP++ K +N          SNGGRV+CM+VWPP G  KFETLSYLP L++E L+KE+ YL+R+ W+PCLEF+LE G + R++++SPGYYDGRYW MWKLPM+GCT+A+QV+ EV E  K
Sbjct:    2 ATGAGAGAATVVSAFTGLKSTAQFPSSFKMSNAAAEWEQKTTSNGGRVRCMQVWPPFGNPKFETLSYLPTLTEEQLVKEVEYLLRNKWVPCLEFDLE-GSISRKYNRSPGYYDGRYWVMWKLPMFGCTEASQVINEVRECAK 142

HSP 2 Score: 26.1794 bits (56), Expect = 5.090e-45
Identity = 11/13 (84.62%), Postives = 11/13 (84.62%), Query Frame = 2

Query:  596 RQVQCISFIAAKP 634
            RQVQCISFI  KP
Sbjct:  158 RQVQCISFIVHKP 170

HSP 3 Score: 25.409 bits (54), Expect = 5.090e-45
Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 3

Query:  555 YPHSFVRIIGFDT--SVKC 605
            YP +F+R+IGFD    V+C
Sbjct:  144 YPKAFIRVIGFDNVRQVQC 162

[Close]

BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS_SACHY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Saccharum hybrid GN=RBCS PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.395e-43
Identity = 77/129 (59.69%), Postives = 102/129 (79.07%), Query Frame = 1

Query:  157 AQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGE 543
            + A+  APF GLKS+++ P  +++   +  + SNGGR++CM+VWP  G KKFETLSYLPPL+ E LLK+++YL+R+ W+PCLEF  E G+VYRE+  SP YYDGRYWTMWKLPM+GCTDA+QV KE+ E
Sbjct:    8 SSATAAAPFQGLKSTASLPVARRSTTSLAKV-SNGGRIRCMQVWPAYGNKKFETLSYLPPLTQEQLLKQVDYLLRNNWVPCLEFSKE-GFVYRENSTSPCYYDGRYWTMWKLPMFGCTDASQVYKELQE 134

HSP 2 Score: 21.9422 bits (45), Expect = 6.395e-43
Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 2

Query:  596 RQVQCISFIAAKPPG 640
            RQ Q ++FIA KP G
Sbjct:  152 RQTQWLTFIAYKPAG 166

[Close]

BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS1_PEA (Ribulose bisphosphate carboxylase small chain, chloroplastic (Fragment) OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 8.396e-43
Identity = 75/102 (73.53%), Postives = 86/102 (84.31%), Query Frame = 1

Query:  241 TSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEV 546
            T I SNG RV+CM+VWPP G KKFETLSYLPPL+ + LLKE+ YL+R GW+PCLEFEL KG+VY EH+KSP YYDGRYWTMWKLPM+G TD  QV+KEV EV
Sbjct:    2 TDITSNGERVKCMQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELLKGFVYGEHNKSPRYYDGRYWTMWKLPMFGTTDPAQVVKEVDEV 103

HSP 2 Score: 25.7942 bits (55), Expect = 8.396e-43
Identity = 11/27 (40.74%), Postives = 18/27 (66.67%), Query Frame = 3

Query:  555 YPHSFVRIIGFDT--SVKCSASVSLLP 629
            YP +FVR+IGF+    V+C + ++  P
Sbjct:  107 YPEAFVRVIGFNNVRQVQCISFIAHTP 133

[Close]

BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS_LARLA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Larix laricina GN=RBCS PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 4.069e-42
Identity = 83/159 (52.20%), Postives = 110/159 (69.18%), Query Frame = 1

Query:  100 MASSMIS----SATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITS----IASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552
            MASS+++    +A  A A  +    +++V+ FTGLKS + FP++K  +N          SNG RV+CM+VWPP   KKFETLSYLP L+ E L+KE+ YL+++ W+PCLEFE E G + R +  SPGYYDGRYW MWKLPM+GCT+A+QVL EV E  K
Sbjct:    1 MASSIMALSSTAAVAAVAAPSKTGNSNVVSAFTGLKSMAQFPSSKTMSNAGAEWEQKTTSNGSRVRCMQVWPPYANKKFETLSYLPRLTPEQLVKEVEYLLKNKWVPCLEFE-EDGEIKRVYGNSPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAK 158

HSP 2 Score: 26.9498 bits (58), Expect = 4.069e-42
Identity = 11/29 (37.93%), Postives = 19/29 (65.52%), Query Frame = 3

Query:  555 YPHSFVRIIGFDT--SVKCSASVSLLPSH 635
            YP++F+R+IGFD    V+C + +   P +
Sbjct:  160 YPNAFIRVIGFDNVRQVQCISFIVHKPEY 188

[Close]

BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS1_SPIOL (Ribulose bisphosphate carboxylase small chain OS=Spinacia oleracea GN=RBCS PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 5.277e-39
Identity = 68/92 (73.91%), Postives = 78/92 (84.78%), Query Frame = 1

Query:  277 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552
            M+VWPP GLKKFETLSYLPPL+ E LL E+NYL+  GWIP LEFE++ G+VYREH KSPGYYDGRYWTMWKLPM+G TD  QV+ EV EV+K
Sbjct:    1 MQVWPPLGLKKFETLSYLPPLTTEQLLAEVNYLLVKGWIPPLEFEVKDGFVYREHDKSPGYYDGRYWTMWKLPMFGGTDPAQVVNEVEEVKK 92

HSP 2 Score: 30.4166 bits (67), Expect = 5.277e-39
Identity = 13/16 (81.25%), Postives = 14/16 (87.50%), Query Frame = 2

Query:  593 KRQVQCISFIAAKPPG 640
            KR+VQCISFIA KP G
Sbjct:  107 KREVQCISFIAYKPAG 122

[Close]

BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS_MARPA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 5.010e-36
Identity = 72/149 (48.32%), Postives = 98/149 (65.77%), Query Frame = 1

Query:  106 SSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552
            +S+++SA V T   AS A  +  +    +++          +   T   +NG RV CM+VW P    KFETLSYLPPLS +AL K+I+Y+I+SGW PC+EF+++ G V RE    PGYYDGRYWTMWKLPM+GCTD+  VL+E+ E +K
Sbjct:    2 ASVVASAAVVTPFAASAASTTKSSQIVSVQAGLKAGVFGGKSEWQTKTQTNGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYVIKSGWAPCIEFDVQ-GTVTREGSTMPGYYDGRYWTMWKLPMFGCTDSASVLREIEECKK 149

HSP 2 Score: 22.7126 bits (47), Expect = 5.010e-36
Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 2

Query:  596 RQVQCISFIAAKP 634
            RQVQC SFI  +P
Sbjct:  166 RQVQCASFIVHQP 178

[Close]

BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS3_WHEAT (Ribulose bisphosphate carboxylase small chain clone 512 (Fragment) OS=Triticum aestivum PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 4.989e-33
Identity = 56/78 (71.79%), Postives = 70/78 (89.74%), Query Frame = 1

Query:  322 SYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKD 555
            +YLPPLS EALLK+++YLIRS W+PCLEF  + G+++REH+ SPGYYDGRYWTMWKLPM+GCTDATQV+ EV EV+K+
Sbjct:    1 AYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVINEVEEVKKE 77

HSP 2 Score: 32.3426 bits (72), Expect = 4.989e-33
Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = 2

Query:  596 RQVQCISFIAAKPPG 640
            RQVQC+SFIA KPPG
Sbjct:   92 RQVQCVSFIAFKPPG 106

[Close]

BLAST of EY705311 vs. ExPASy Swiss-Prot
Match: RBS_EUGGR (Ribulose bisphosphate carboxylase small chains, chloroplastic OS=Euglena gracilis GN=RBCS1 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 5.254e-24
Identity = 51/98 (52.04%), Postives = 67/98 (68.37%), Query Frame = 1

Query:  277 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552
            MKVW P   KKFET SYLPPLSD  + K+++ +I  G  PCLEF   E  ++  ++       + GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++
Sbjct:  135 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRR 232

HSP 2 Score: 110.538 bits (275), Expect = 5.254e-24
Identity = 51/98 (52.04%), Postives = 67/98 (68.37%), Query Frame = 1

Query:  277 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552
            MKVW P   KKFET SYLPPLSD  + K+++ +I  G  PCLEF   E  ++  ++       + GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++
Sbjct:  279 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRR 376

HSP 3 Score: 110.538 bits (275), Expect = 5.254e-24
Identity = 51/98 (52.04%), Postives = 67/98 (68.37%), Query Frame = 1

Query:  277 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552
            MKVW P   KKFET SYLPPLSD  + K+++ +I  G  PCLEF   E  ++  ++       + GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++
Sbjct:  566 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRR 663

HSP 4 Score: 110.538 bits (275), Expect = 5.254e-24
Identity = 51/98 (52.04%), Postives = 67/98 (68.37%), Query Frame = 1

Query:  277 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552
            MKVW P   KKFET SYLPPLSD  + K+++ +I  G  PCLEF   E  ++  ++       + GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++
Sbjct:  709 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRR 806

HSP 5 Score: 110.538 bits (275), Expect = 5.254e-24
Identity = 51/98 (52.04%), Postives = 67/98 (68.37%), Query Frame = 1

Query:  277 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552
            MKVW P   KKFET SYLPPLSD  + K+++ +I  G  PCLEF   E  ++  ++       + GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++
Sbjct:  854 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRR 951

HSP 6 Score: 110.538 bits (275), Expect = 5.254e-24
Identity = 51/98 (52.04%), Postives = 67/98 (68.37%), Query Frame = 1

Query:  277 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552
            MKVW P   KKFET SYLPPLSD  + K+++ +I  G  PCLEF   E  ++  ++       + GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++
Sbjct:  997 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRR 1094

HSP 7 Score: 21.9422 bits (45), Expect = 5.254e-24
Identity = 8/15 (53.33%), Postives = 11/15 (73.33%), Query Frame = 2

Query:  596 RQVQCISFIAAKPPG 640
            +QVQ ISF+  +P G
Sbjct:  248 KQVQVISFVVQRPSG 262

HSP 8 Score: 21.9422 bits (45), Expect = 5.254e-24
Identity = 8/15 (53.33%), Postives = 11/15 (73.33%), Query Frame = 2

Query:  596 RQVQCISFIAAKPPG 640
            +QVQ ISF+  +P G
Sbjct:  392 KQVQVISFVVQRPSG 406

HSP 9 Score: 21.9422 bits (45), Expect = 5.254e-24
Identity = 8/15 (53.33%), Postives = 11/15 (73.33%), Query Frame = 2

Query:  596 RQVQCISFIAAKPPG 640
            +QVQ ISF+  +P G
Sbjct:  679 KQVQVISFVVQRPSG 693

HSP 10 Score: 21.9422 bits (45), Expect = 5.254e-24
Identity = 8/15 (53.33%), Postives = 11/15 (73.33%), Query Frame = 2

Query:  596 RQVQCISFIAAKPPG 640
            +QVQ ISF+  +P G
Sbjct:  822 KQVQVISFVVQRPSG 836

HSP 11 Score: 21.9422 bits (45), Expect = 5.254e-24
Identity = 8/15 (53.33%), Postives = 11/15 (73.33%), Query Frame = 2

Query:  596 RQVQCISFIAAKPPG 640
            +QVQ ISF+  +P G
Sbjct:  966 KQVQVISFVVQRPSG 980

HSP 12 Score: 21.9422 bits (45), Expect = 5.254e-24
Identity = 8/15 (53.33%), Postives = 11/15 (73.33%), Query Frame = 2

Query:  596 RQVQCISFIAAKPPG 640
            +QVQ ISF+  +P G
Sbjct: 1110 KQVQVISFVVQRPSG 1124

HSP 13 Score: 110.538 bits (275), Expect = 1.404e-23
Identity = 51/98 (52.04%), Postives = 67/98 (68.37%), Query Frame = 1

Query:  277 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552
            MKVW P   KKFET SYLPPLSD  + K+++ +I  G  PCLEF   E  ++  ++       + GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++
Sbjct: 1141 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRR 1238

HSP 14 Score: 108.612 bits (270), Expect = 1.960e-23
Identity = 50/98 (51.02%), Postives = 66/98 (67.35%), Query Frame = 1

Query:  277 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQK 552
            MKVW P   KKFET SYLPPLSD  + K+++ +I  G  PCLEF   E  ++  ++       + GYYD  YWTMWKLPM+GCTDA+QVL+E+ E ++
Sbjct:  422 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNHYWTMWKLPMFGCTDASQVLREISECRR 519

HSP 15 Score: 21.9422 bits (45), Expect = 1.960e-23
Identity = 8/15 (53.33%), Postives = 11/15 (73.33%), Query Frame = 2

Query:  596 RQVQCISFIAAKPPG 640
            +QVQ ISF+  +P G
Sbjct:  535 KQVQVISFVVQRPSG 549

The following BLAST results are available for this feature:

BLAST of EY705311 vs. ExPASy Swiss-Prot

BLAST of EY705311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112


Match Name	E-value	Identity	Description
RBS_AEGTA	4.255e-48	60.90	Ribulose bisphosphate carboxylase small chain, chl...	[more]
RBS_MAIZE	6.536e-46	60.61	Ribulose bisphosphate carboxylase small chain, chl...	[more]
RBS_PINTH	5.090e-45	56.34	Ribulose bisphosphate carboxylase small chain, chl...	[more]
RBS_SACHY	6.395e-43	59.69	Ribulose bisphosphate carboxylase small chain, chl...	[more]
RBS1_PEA	8.396e-43	73.53	Ribulose bisphosphate carboxylase small chain, chl...	[more]
RBS_LARLA	4.069e-42	52.20	Ribulose bisphosphate carboxylase small chain, chl...	[more]
RBS1_SPIOL	5.277e-39	73.91	Ribulose bisphosphate carboxylase small chain OS=S...	[more]
RBS_MARPA	5.010e-36	48.32	Ribulose bisphosphate carboxylase small chain, chl...	[more]
RBS3_WHEAT	4.989e-33	71.79	Ribulose bisphosphate carboxylase small chain clon...	[more]
RBS_EUGGR	5.254e-24	52.04	Ribulose bisphosphate carboxylase small chains, ch...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C3-701-042-B08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY705311 ID=EY705311; Name=EY705311; organism=Citrus sinensis; type=EST; length=944bp
TTTCCGACCCACGCGTCCGATTATATAAACCTACCGCCCACTGAGCATCC
TCCTATTAAGTAAAATAACTTGCAAAGCTAGAAGAAGGATCAAGTACCAA
TGGCTTCCTCAATGATCTCATCGGCCACCGTTGCCACCGCGAACCGCGCC
AGCCTTGCTCAGGCCAGCATGGTCGCCCCCTTCACCGGCCTCAAGTCTTC
TTCTGCTTTCCCAGCAACCAAGAAGACCAACAATGACATTACTTCCATTG
CAAGCAACGGCGGAAGAGTCCAATGCATGAAGGTGTGGCCACCAACTGGC
TTGAAGAAGTTCGAGACTCTCTCATACCTCCCGCCACTGTCCGATGAAGC
TTTGCTCAAGGAAATCAATTACCTTATCCGCTCCGGCTGGATTCCCTGCT
TGGAATTCGAGTTGGAGAAAGGATGGGTGTACCGTGAGCACCACAAGTCA
CCAGGATACTACGATGGACGCTACTGGACAATGTGGAAGCTGCCCATGTA
TGGGTGCACAGATGCAACCCAGGTTTTGAAGGAGGTTGGGGAGGTCCAGA
AGGATACCCACATTCATTCGTCCGAATTATCGGATTTGACACAAGCGTCA
AGTGCAGTGCATCAGTTTCATTGCTGCCAAGCCACCAGGCGTCTAGGTTC
CCAATTAAATTTGTGNTACCACCCATGCAATATTGTTGATTATTATTATG
TGTAACCCCCATAATGATCATTCGATCAATGGGGGTTCGGTTTGCGTTTA
ATTTGTACTTANGCTGCTGTTGCTGCTGCTCAAACTTTTTTGGTTTTCTC
CCGACNNTTGCTNCTTTTTTTTTTTTTTAATATATTTAATAATNGAATCC
TTTGNTTCAGNTNCATAATCTGGGTCTCGGGATGTCAGTTAATGAGTGAG
AATACTGGAATTAAAGAGTAGTTTATGATTCTTGCAAAAAAAAA