EY659325

Overview
NameEY659325
Unique NameEY659325
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY659325 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.792e-11
Identity = 42/158 (26.58%), Postives = 75/158 (47.47%), Query Frame = 2 
Query:   32 LKELDLSQNNFFGELPISIGNLGSLKELDLSQNGFFGELPTSIRNLFSLEKLDLSFNKFLGEFPWSSGNFSSLKLLDLRSCGFWGKVPHAISNFTRLQFLFLGFNNFSGDLLGSIGNLRSLEAIYMSKCNFSGQITSSLRNLTELVVLDMAQNSYGGT 505
            +KEL L   N  G+L   +G L +L  L+   N   G++P  + NL  L  L LS N+  G  P   G+ S+L +L +      GK+P +++N  +L+   +  N+ +G +      L ++    M     +G +   L  +  L +L +  +++ GT
Sbjct:   79 VKELRLLNMNLTGQLAPELGLLSNLTILNFMWNDLTGQIPPELGNLTHLIFLLLSGNQLTGSLPQELGSLSNLLILQIDYNEISGKLPTSLANLKKLKHFHMNNNSITGQIPPEYSTLTNVLHFLMDNNKLTGNLPPELAQMPSLRILQLDGSNFDGT 236
The following BLAST results are available for this feature:
BLAST of EY659325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
Y5374_ARATH9.792e-1126.58Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-H07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659325 ID=EY659325; Name=EY659325; organism=Citrus sinensis; type=EST; length=903bp
GTGGCCTATTTCCATTGGAAATCTTAGTTCTTTGAAAGAACTTGACCTTT
CACAAAATAATTTTTTTGGTGAGTTGCCTATTTCCATAGGAAATCTTGGT
TCATTGAAAGAACTTGACCTTTCACAAAATGGATTTTTCGGTGAGTTGCC
TACTTCCATTCGAAATCTTTTTTCTTTGGAAAAACTTGACCTTTCATTTA
ATAAATTTTTGGGTGAGTTTCCATGGTCGTCTGGAAATTTTAGTTCTTTG
AAGCTATTAGATCTGAGGTCATGTGGTTTTTGGGGCAAAGTTCCACATGC
AATTAGTAATTTCACCCGGCTACAATTTTTGTTTCTTGGATTTAATAATT
TTTCGGGTGACTTACTTGGTTCCATCGGAAATCTTAGGTCATTGGAAGCA
ATATATATGTCTAAGTGTAATTTTTCAGGTCAAATTACATCTTCACTTAG
GAATCTTACCGAACTTGTCGTCCTTGACATGGCTCAAAATTCTTATGGAG
GAACGATAGAGTTAGATGTTTTACTTACTAGCTGGAAAAAATTGGAAGTT
TTAGCTCTCTCATTAAATAGGTTGTCAGTGCTCACCAAAGCCACTTCTAA
TACCACTTCACAGAAAATTCAGTATATAGGGATTGCGTTCATGCAATCTT
ACTAAATTTCCAAATTTCTTGGAAAACCAACGTGATATGGGTGGTCCTGG
ACCTTTCTGACAATAGAATTCAGGGNAAAGTACCTAAATGGGTTGTTAGA
CCCCAATATGCAGAATCTCAGTGCCTTTGACCTTTCGCATAACTTGNTAC
CNGGGTTNGATCANGATCCTGCTCTTCTTNCAGGNNNATACGGGGATCNG
NGACTTTNGATCTTAGCTCTAAATATTACAAGGACCACTCCAGTNCACCC
CCT
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