EY659324

Overview
NameEY659324
Unique NameEY659324
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length739
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2889 contig Csv1_Contig2889:70..807. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659324 vs. ExPASy Swiss-Prot
Match: DNAK_AGRT5 (Chaperone protein dnaK OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=dnaK PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 7.569e-13
Identity = 47/132 (35.61%), Postives = 77/132 (58.33%), Query Frame = 2
Query:    2 DANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 397
            DANGI+ VSA+DK TG++ +I I    G LS  +IEKMV++AE     D++ +  VEAKN  E+  ++   +VK+   G K+   D+K IEDAI      +++ +  +AD+ + K + L  +   +   +Y+
Sbjct:  474 DANGIVQVSAKDKGTGKEQQIRI-QASGGLSDADIEKMVKDAEANAEADKKRRAGVEAKNQAESLIHSTEKSVKE--YGDKVSETDRKAIEDAIASLKTAVEAAE-PDADDIQAKTQTLMEVSMKLGQAIYE 601          
BLAST of EY659324 vs. ExPASy Swiss-Prot
Match: DNAK_AERHH (Chaperone protein dnaK OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=dnaK PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.569e-13
Identity = 42/96 (43.75%), Postives = 62/96 (64.58%), Query Frame = 2
Query:    2 DANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQ 289
            DANGIL+VSA+DK T ++ KITI    G LS DEIE+MV+EAE   AED++ ++ V+ +N  +   +++R  + +   G  L   DK KIE A+ +
Sbjct:  479 DANGILHVSAKDKETNKEQKITIQASSG-LSDDEIERMVREAEANAAEDKKFEELVQTRNQADGLVHSVRKQITE--AGEALPADDKTKIEAALSE 571          
BLAST of EY659324 vs. ExPASy Swiss-Prot
Match: DNAK2_SYNY3 (Chaperone protein dnaK2 OS=Synechocystis sp. (strain PCC 6803) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.569e-13
Identity = 46/134 (34.33%), Postives = 74/134 (55.22%), Query Frame = 2
Query:    2 DANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADE--FEDKMKELESICNPIIAKMYQ 397
            DANGILNV+A+D+ TG++  I+IT     L   E+++MV+EAE   A D+E ++K++ KN  ++  Y     + +  +G K+  ADK K E  I           +A+ D+   +  M EL+ +   I + MYQ
Sbjct:  474 DANGILNVTAKDRGTGKEQSISITG-ASTLPDTEVDRMVKEAESNAAADKERREKIDRKNQADSLVYQAEKQITE--LGDKVPAADKIKAEGLIKDL-----KEAVAQEDDAKIQTVMPELQQVLYSIGSNMYQ 599          
BLAST of EY659324 vs. ExPASy Swiss-Prot
Match: DNAK_VIBHA (Chaperone protein dnaK OS=Vibrio harveyi GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.885e-13
Identity = 44/96 (45.83%), Postives = 61/96 (63.54%), Query Frame = 2
Query:    2 DANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQ 289
            DA+GIL+VSA+DK TG++ KITI    G LS D+IEKMVQEAE  K  D++ ++   A+N  +   +  R  V  E+ G  L   +K+KIE AI +
Sbjct:  480 DADGILHVSAKDKQTGKEQKITI-QASGGLSDDDIEKMVQEAEANKEADKKFEELATARNQADQMIHGTRKQV--EEAGEALPAEEKEKIEAAISE 572          
BLAST of EY659324 vs. ExPASy Swiss-Prot
Match: DNAK_RALPJ (Chaperone protein dnaK OS=Ralstonia pickettii (strain 12J) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.885e-13
Identity = 44/110 (40.00%), Postives = 68/110 (61.82%), Query Frame = 2
Query:    2 DANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEAD 331
            DANGIL+V A+DK TG++NKITI    G LS+ EIE+MV++AE    ED++ ++ V+++N  E   ++ +  + +   G KL+  +K KIE AI +  + L     A  D
Sbjct:  480 DANGILHVGAKDKATGKENKITIKASSG-LSEAEIERMVKDAEANAEEDKKLRELVDSRNQGEALVHSTKKALGE--YGDKLEAGEKDKIEAAIKELEETLKGTDKAAID 586          
BLAST of EY659324 vs. ExPASy Swiss-Prot
Match: DNAK_LYSSC (Chaperone protein dnaK OS=Lysinibacillus sphaericus (strain C3-41) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.885e-13
Identity = 41/132 (31.06%), Postives = 77/132 (58.33%), Query Frame = 2
Query:    2 DANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 397
            D NGI++V A+D  T ++  I I +D G LS+ EIE+MV++AE     D + K++ + +N  +   + +  T+ D  +G ++   +KK +EDA D+  + L++ +L      ++K   LE +  P++ K+Y+
Sbjct:  449 DKNGIVSVKAKDLGTNKEQTIVIQSDSG-LSEAEIERMVKDAEANADADAKRKEEADLRNEADQLVFQVDKTITD--LGEQITEDEKKSVEDARDELKKALEAGELEGIKAAKEK---LEGVLQPLVMKVYE 574          
BLAST of EY659324 vs. ExPASy Swiss-Prot
Match: DNAK_LEGPL (Chaperone protein dnaK OS=Legionella pneumophila (strain Lens) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.885e-13
Identity = 46/134 (34.33%), Postives = 76/134 (56.72%), Query Frame = 2
Query:    2 DANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAID---QAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 394
            DANGILNVSA+DK TG+   I I    G LS++E+  MV++A+ +  ED++ K+  E +N  ++  ++   ++KD  +  +L   +KK IE AI    +A+Q  D  ++      EDK+K L      +  ++Y
Sbjct:  479 DANGILNVSAKDKATGKAQSIVIKASSG-LSEEEVAAMVKDAQSHAEEDKKFKEMAELRNQADSLIHSCEKSMKD--LADELSEDEKKGIETAISELKEAVQGTDKARI------EDKLKVLTDASAKMAERIY 603          
BLAST of EY659324 vs. ExPASy Swiss-Prot
Match: DNAK_LEGPC (Chaperone protein dnaK OS=Legionella pneumophila (strain Corby) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.885e-13
Identity = 46/134 (34.33%), Postives = 76/134 (56.72%), Query Frame = 2
Query:    2 DANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAID---QAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 394
            DANGILNVSA+DK TG+   I I    G LS++E+  MV++A+ +  ED++ K+  E +N  ++  ++   ++KD  +  +L   +KK IE AI    +A+Q  D  ++      EDK+K L      +  ++Y
Sbjct:  479 DANGILNVSAKDKATGKAQSIVIKASSG-LSEEEVAAMVKDAQSHAEEDKKFKEMAELRNQADSLIHSCEKSMKD--LADELSEDEKKGIETAISELKEAVQGTDKARI------EDKLKVLTDASAKMAERIY 603          
BLAST of EY659324 vs. ExPASy Swiss-Prot
Match: DNAK_IDILO (Chaperone protein dnaK OS=Idiomarina loihiensis GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.885e-13
Identity = 40/99 (40.40%), Postives = 64/99 (64.65%), Query Frame = 2
Query:    2 DANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQ 298
            DA+GIL+VSA+DK TG++ KITI    G L + E++KMV++AE +  ED++ ++ V+A+N  +   +  RN +K+  +G  L   DK  IE A ++  Q
Sbjct:  479 DADGILHVSAKDKDTGKEQKITIKASSG-LDESEVDKMVKDAEAHAEEDKKFEEMVQARNQADGLVHATRNQLKE--VGDALSQEDKDAIEKACEELEQ 574          
BLAST of EY659324 vs. ExPASy Swiss-Prot
Match: DNAK_DEIRA (Chaperone protein dnaK OS=Deinococcus radiodurans GN=dnaK PE=1 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 9.885e-13
Identity = 41/112 (36.61%), Postives = 75/112 (66.96%), Query Frame = 2
Query:    2 DANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADK-KKIEDAIDQAIQWLDSNQLAEADE 334
            DANGIL+V+A++KT+G+++ ITI N    L K ++E+MVQEAE+  A D++ K+KVE +N L++        +++++ G+  D  D+ K   D  ++A++  D +++A+A +
Sbjct:  475 DANGILHVTAKEKTSGKESSITIENTT-TLDKTDVERMVQEAEQNAAADKQRKEKVEKRNNLDSLRVQAVQQLEEQE-GAAQDAKDRLKAAADEAEEAVRSEDDSKIADAQK 584          
The following BLAST results are available for this feature:
BLAST of EY659324 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_AGRT57.569e-1335.61Chaperone protein dnaK OS=Agrobacterium tumefacien... [more]
DNAK_AERHH7.569e-1343.75Chaperone protein dnaK OS=Aeromonas hydrophila sub... [more]
DNAK2_SYNY37.569e-1334.33Chaperone protein dnaK2 OS=Synechocystis sp. (stra... [more]
DNAK_VIBHA9.885e-1345.83Chaperone protein dnaK OS=Vibrio harveyi GN=dnaK P... [more]
DNAK_RALPJ9.885e-1340.00Chaperone protein dnaK OS=Ralstonia pickettii (str... [more]
DNAK_LYSSC9.885e-1331.06Chaperone protein dnaK OS=Lysinibacillus sphaericu... [more]
DNAK_LEGPL9.885e-1334.33Chaperone protein dnaK OS=Legionella pneumophila (... [more]
DNAK_LEGPC9.885e-1334.33Chaperone protein dnaK OS=Legionella pneumophila (... [more]
DNAK_IDILO9.885e-1340.40Chaperone protein dnaK OS=Idiomarina loihiensis GN... [more]
DNAK_DEIRA9.885e-1336.61Chaperone protein dnaK OS=Deinococcus radiodurans ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-H06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659324 ID=EY659324; Name=EY659324; organism=Citrus sinensis; type=EST; length=739bp
CGATGCTAATGGTATCTTGAATGTCTCAGCAGAAGATAAGACAACGGGCC
AAAAGAACAAGATCACAATCACCAACGATAAGGGTAGATTGTCAAAGGAT
GAAATTGAGAAGATGGTTCAAGAGGCCGAGAAGTACAAGGCTGAAGACGA
GGAGCACAAGAAGAAGGTCGAGGCCAAGAATGCCTTGGAAAACTATGCCT
ACAATATGAGGAACACTGTCAAGGACGAGAAGATCGGCTCCAAACTTGAT
CCAGCTGACAAGAAGAAGATTGAGGATGCCATTGATCAGGCAATTCAATG
GCTTGATAGCAACCAGCTGGCTGAGGCCGATGAATTTGAAGACAAGATGA
AGGAGCTTGAGAGCATCTGCAATCCCATCATTGCCAAGATGTATCAAGGT
GCTGGTGGTGATATGGGCGTTGGCATGGATGATGATGCTCCTCCAGCTGG
TGGCAGTGCCGCCGGTCCCAAGATTGAGGAAGTTGACTAAGCTTCCAGTT
TTATTTTGTTGTGTTTGTGGGAGGTCGGTTTTTTGACGGTGGGAAAACTG
GACGTTTGGTTTTTATCTTATGTTGTTTTAGCCTTAGGATGAATATTAAT
TNTTCCTTTTCTTTTTATTTTTCAAATTTTACTTTTAATTCGGACCAATT
TATATAATGAATANTTTTTCGGTCCCTAAAAAANAANNNANNNNNNNNAN
NNNNNNNNNNNNNNNNNANANAANAAAAAAAAAAAAAAN
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