EY659320

Overview
NameEY659320
Unique NameEY659320
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659320_ssr1 microsatellite EY659320_ssr1:1..26. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY659320 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.318e-26
Identity = 84/244 (34.43%), Postives = 126/244 (51.64%), Query Frame = 3
Query:  114 AMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLMLLVSYNALHCSFVD-----GQRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKIIFLKDELRL*SRTNANL*LPMRRLKGQ*CFNNGMLTPLL-------CPGEGPIIIKRLGHG-------KKLVDVGGGVRTTPNLIFSNTPY*R-VKSDLPYAIKDRPPFPAL-HTGG 782
            AM LA+A VLPAV+ A +ELD+ EI+++AGPGA L+  E+ +Q+P +  NP+ A   LDR+  LL SY+ L C+  D      +RLY LAP+ K  V+ N DGVSL P   +  D++ L+ W+ +K   L+              +P  +  G   F+     P               I++K++          K +VDVGGG     N+I +  P  + +  DLP+ I+D P +P + H GG
Sbjct:    5 AMQLATASVLPAVLTAAIELDLLEIMARAGPGAYLTPGEVASQLPTQ--NPD-APVMLDRIFRLLASYSVLTCTLCDLPEGKVERLYGLAPLCKFLVK-NEDGVSLAPLRLIDQDRVFLESWYYMKDAILEGG------------IPFHKAHGMTAFDYPGTDPRFNKIFNRAMSDHSTIMMKKILETYNGFEGLKTVVDVGGGTGAILNMIVAKYPSIKGINFDLPHVIEDAPSYPGVEHVGG 232          
BLAST of EY659320 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.407e-25
Identity = 93/253 (36.76%), Postives = 128/253 (50.59%), Query Frame = 3
Query:   87 EEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLMLLVSYNALHCS---FVDG--QRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKIIFLKDELRL*SRTNANL*LPMRRLKGQ*CFNNGMLTPLL-------CPGEGPIIIKRLGHGKK-------LVDVGGGVRTTPNLIFSNTPY*R-VKSDLPYAIKDRPPFPAL-HTGG 782
            +EE N F  AM LASA VLP V++A +ELD+ EI++KAGPGA LS  ++ +Q+P K  NPE A   LDR+L LL SY+ L  S     DG  +RLY L PV K F+  N DGVS+     +  DK+ ++ W+ LK   L               +P  +  G   F+     P               I +K++    K       +VDVGGG     N+I S  P  + +  DLP+ I+D P +P + H GG
Sbjct:   16 DEEANLF--AMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPNDLASQLPTK--NPE-APVMLDRMLRLLASYSILTYSLRTLPDGKVERLYGLGPVCK-FLTKNEDGVSIAALCLMNQDKVLVESWYHLKDAVLDGG------------IPFNKAYGMTAFDYHGTDPRFNKVFNKGMADHSTITMKKILETYKGFEGLTSIVDVGGGTGAVVNMIVSKYPSIKGINFDLPHVIEDAPQYPGVQHVGG 250          
BLAST of EY659320 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.407e-25
Identity = 93/253 (36.76%), Postives = 127/253 (50.20%), Query Frame = 3
Query:   87 EEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLMLLVSYNALHCSF---VDG--QRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKIIFLKDELRL*SRTNANL*LPMRRLKGQ*CFNNGMLTPLL-------CPGEGPIIIKRLGHG-------KKLVDVGGGVRTTPNLIFSNTPY*R-VKSDLPYAIKDRPPFPAL-HTGG 782
            +EE N F  AM LASA VLP ++++ +ELD+ EII+KAGPGA++S  EI +Q+P    NP+ A   LDR+L LL  Y  L CS     DG  QRLY LA V+K+ V+ N DGVS+     +  DK+ ++ W+ LK   L               +P  +  G   F      P               I +K++          K LVDVGGG     N I S  P  + +  DLP+ I+D P +P + H GG
Sbjct:   16 DEEANLF--AMQLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQLP--TTNPD-APVMLDRMLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVK-NEDGVSISALNLMNQDKVLMESWYHLKDAVLDGG------------IPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVGG 250          
BLAST of EY659320 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.095e-25
Identity = 91/259 (35.14%), Postives = 126/259 (48.65%), Query Frame = 3
Query:   69 ASIADQEEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLMLLVSYNALHCSFVD-----GQRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKIIFLKDELRL*SRTNANL*LPMRRLKGQ*CFNNGMLTPLL-------CPGEGPIIIKRLGHGKK-------LVDVGGGVRTTPNLIFSNTPY*R-VKSDLPYAIKDRPPFPALHTGGG 785
            A I D+E    NF  AM L S+ VLP V++  +ELD+ EI++KAGPGA LS ++I + +P K  NP+ A   LDR+L LL SY+ L CS  D      +RLY LA V K F+  N DGVS+ P   +  DK+ ++ W+ LK   L+              +P  +  G   F      P               + +K++    K       LVDVGGG     + I S  P  + +  DLP+ I D P FP +   GG
Sbjct:   12 AQILDEEA---NF--AMQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLSPSDIASHLPTK--NPD-APVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCK-FLTKNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGG------------IPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSKMAMKKILESYKGFEGLASLVDVGGGTGAVVSTIVSKYPSIKGINFDLPHVIADAPAFPGVENVGG 249          
BLAST of EY659320 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.985e-25
Identity = 94/256 (36.72%), Postives = 128/256 (50.00%), Query Frame = 3
Query:   87 EEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKA---GPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLMLLVSYNALHCS---FVDG--QRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKIIFLKDELRL*SRTNANL*LPMRRLKGQ*CFNNGMLTPLL-------CPGEGPIIIKRLGHG-------KKLVDVGGGVRTTPNLIFSNTPY*R-VKSDLPYAIKDRPPFPAL-HTGG 782
            +EE N F  AM LASA VLP V++A +ELDV EI++K+   G GA +S AEI AQ+P    NP+ A   LDRVL LL SY+ + CS     DG  +RLY LAPV K F+  N DGVSL P   +  DK+ ++ W+ LK   L               +P  +  G   F      P               I +K++            +VDVGGG     ++I +  P  + +  DLP+ I+D P +P + H GG
Sbjct:   18 DEEANLF--AMQLASASVLPMVLKAAIELDVLEIMAKSIPHGSGAYISPAEIAAQLP--TTNPD-APVMLDRVLRLLASYSVVTCSLRELPDGKVERLYGLAPVCK-FLTKNEDGVSLAPLCLMNQDKVLMESWYYLKDAILDGG------------IPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTITMKKIFEMYTGFEALNTIVDVGGGTGAVLSMIVAKYPSIKGINFDLPHVIEDAPIYPGVEHVGG 255          
BLAST of EY659320 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.467e-24
Identity = 88/259 (33.98%), Postives = 124/259 (47.88%), Query Frame = 3
Query:   69 ASIADQEEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLMLLVSYNALHCSFVD-----GQRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKIIFLKDELRL*SRTNANL*LPMRRLKGQ*CFNNGMLTPLLCP--GEGPIIIKRLGHGK------------KLVDVGGGVRTTPNLIFSNTPY*R-VKSDLPYAIKDRPPFPALHTGGG 785
            A I D+E    NF  A+ L S+ VLP V++  +ELD+ EI++KAGPGA L  ++I + +P K+ N   A   LDR+L LL SY+ L CS  D      +RLY LA V K F+  N DGVS+ P   +  DK+ ++ W+ LK   L+              +P  +  G   F      P       +G  +  ++   K             LVDVGGG     + I S  P  + +  DLP+ I D P FP +   GG
Sbjct:   12 AQILDEEA---NF--ALQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLPPSDIASHLPTKNPN---APVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCK-FLTRNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGG------------IPFNKAYGMTAFEYHGTDPRFNKVFNKGMSVHSKMAMKKILETYKGFEGLASLVDVGGGTGAVVSTIVSKYPSIKGINFDLPHVIADAPAFPGVENVGG 249          
BLAST of EY659320 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.913e-24
Identity = 88/253 (34.78%), Postives = 127/253 (50.20%), Query Frame = 3
Query:   90 EETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLMLLVSYNALHCSF---VDG--QRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKIIFLKDELRL*SRTNANL*LPMRRLKGQ-----*CFNNGMLTPLLCPGEGPIIIKRLGHG-KKLVDVGGGVRTTPNLIFSNTPY*R-VKSDLPYAIKDRPPFPAL-HTGGGFISKCLSG 809
            ++   F  AM LASA VLP V++  +ELD+ E I+KAGP   +S +E+VAQ+P K NNPE A   +DR+  LL SY+ L C+     DG  +R Y LAPV K  ++N+  GVSL P + +  DK+ ++ W+ LK   L   +      N    +      G+       FN+GM        +  + +     G K LVDVGGG   + N+I S     + +  DLP+ I D   +  + H GG        G
Sbjct:    5 QDDQAFLFAMQLASASVLPMVLKTAIELDLLETIAKAGPHGSVSSSELVAQLP-KVNNPE-APVMIDRICSLLASYSVLTCTLKETADGCAERFYGLAPVCKFLIKNDA-GVSLAPLLLMNQDKVLMESWYYLKDPVLDGGIPF----NKAYGMSAFEYHGKDQRFNKVFNSGMFNHSTMTMKKIVELYNGFSGLKTLVDVGGGTGASLNMITSKHKSLKGINFDLPHVIADATTYQGIEHVGGDMFESVPKG 250          
BLAST of EY659320 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 5.006e-23
Identity = 90/242 (37.19%), Postives = 124/242 (51.24%), Query Frame = 3
Query:   87 EEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKA-GPGAKLSVAEIVAQIPLKDNNPEAAATTLDRVLMLLVSYNALHCSFVD-----GQRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKIIFLKDELRL*SRTNAN-L*LPMRRLKGQ*CFNNGMLTPLLCPGEGPIIIKRLGHG-KKLVDVGGGVRTTPNLIFSNTP-Y*RVKSDLPYAIKDRPPFPAL-HTGG 782
            +EE N F  AM LASA VLP  ++A +ELDV EI++K+  P   +S AEI AQ+P    NPE A   LDRVL LL SY+ +  +  +      +RLY LAPV K F+  N DGVSL P++    DK+ L+ WF LK   L+  +        N         +    FN GM +      +  + +     G   +VDVGGG     ++I +  P    +  DLP+ I+D P F  + H GG
Sbjct:   18 DEEANLF--AMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLP--TTNPE-APVMLDRVLRLLASYSVVTYTLRELPSGKVERLYGLAPVCK-FLTKNEDGVSLAPFLLTATDKVLLEPWFYLKDAILEGGIPFNKAYGMNEFDYHGTDHRFNKVFNKGMSSNSTITMKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHLGG 253          
BLAST of EY659320 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.006e-23
Identity = 87/268 (32.46%), Postives = 130/268 (48.51%), Query Frame = 3
Query:   66 MASIADQEEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAKLSVA--EIVAQIPLKDNNPEAAATTLDRVLMLLVSYNALHCSFVDG----QRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKIIFLKDELRL*SRTNANL*LPMRRLKG-----Q*CFNNGMLTPLLCPGEGPIIIKRL-------GHGKKLVDVGGGVRTTPNLIFSNTPY*R-VKSDLPYAIKDRPPFPAL-HTGGGFISKCLSG 809
            +A++ D+E       +AM LAS+ +LP  ++  +EL + E++ K   G K ++A  E+VA++P   ++P AAA  +DR+L LL SY+ + C   D     +R YS APV K ++  N DGVS+     +  DK+ ++ W+ LK   L   +      N    +      G        FN GM           II K+L            LVDVGGGV  T + I S  P+   V  DLP+ I + PPFP + H GG   +   +G
Sbjct:    8 VAAVVDEEA----CMYAMQLASSSILPMTLKNAIELGLLEVLQKEAGGGKAALAPEEVVARMPAAPSDPAAAAAMVDRMLRLLASYDVVRCQMEDRDGRYERRYSAAPVCK-WLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPF----NKAYGMTAFEYHGTDARFNRVFNEGM------KNHSVIITKKLLDFYTGFEGVSTLVDVGGGVGATLHAITSRHPHISGVNFDLPHVISEAPPFPGVRHVGGDMFASVPAG 260          
BLAST of EY659320 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.902e-22
Identity = 84/269 (31.23%), Postives = 128/269 (47.58%), Query Frame = 3
Query:   66 MASIADQEEETNNFSHAMGLASAIVLPAVMQAVVELDVFEIISKAGPGAK-LSVAEIVAQIPLKDNNPEAAATTLDRVLMLLVSYNALHCSFVDG----QRLYSLAPVSKHFVRNNRDGVSLRPYMALCLDKICLDGWFGLKIIFLKDELRL*SRTNANL*LPMRRLKGQ*CFNNGMLTPLL-------CPGEGPIIIKRL-------GHGKKLVDVGGGVRTTPNLIFSNTPY*R-VKSDLPYAIKDRPPFPALHTGGGFISKCLSGG 812
            +A++AD+E       +AM LASA +LP  ++  +EL + E++    P  K L+  E+VA++P+   NP+ AA  +DR+L LL SY+ + C   D     +R YS APV K ++  N DGVS+     +  DK+ ++ W+ LK   L               +P  +  G   F      P               II K+L            LVDVGGG+  T + I S+ P  + +  DLP+ I + PPFP +   GG + K +  G
Sbjct:    8 VAAVADEEA----CMYAMQLASASILPMTLKNALELGLLEVLQAEAPAGKALAPEEVVARLPVAPTNPD-AADMVDRMLRLLASYDVVKCQMEDKDGKYERRYSAAPVGK-WLTPNEDGVSMAALTLMNQDKVLMESWYYLKDAVLDGG------------IPFNKAYGMTAFEYHGTDPRFNRVFNEGMKNHSVIITKKLLEFYTGFEGVSTLVDVGGGIGATLHAITSHHPQIKGINFDLPHVISEAPPFPGVQHVGGDMFKSVPAG 258          
The following BLAST results are available for this feature:
BLAST of EY659320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
COMT1_EUCGL6.318e-2634.43Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
COMT1_ROSCH1.407e-2536.76Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_MEDSA1.407e-2536.76Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT3_POPKI4.095e-2535.14Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT1_CLABR6.985e-2536.72Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT2_POPTM3.467e-2433.98Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_ZINEL5.913e-2434.78Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
IEMT_CLABR5.006e-2337.19(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
COMT1_MAIZE5.006e-2332.46Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
COMT1_SACOF1.902e-2231.23Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-H01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659320 ID=EY659320; Name=EY659320; organism=Citrus sinensis; type=EST; length=903bp
ATATATATATATATATATATATATATAGACACCTCAAGCAATTAAGAAAG
AAGCAAATTATAATCATGGCTTCTATAGCTGATCAGGAAGAAGAGACAAA
TAATTTCTCACATGCAATGGGACTTGCAAGTGCAATAGTGCTACCTGCAG
TTATGCAAGCAGTGGTAGAGCTTGATGTGTTTGAGATCATAAGCAAAGCC
GGTCCTGGTGCTAAGCTTTCGGTTGCGGAGATTGTGGCTCAAATTCCCTT
AAAAGATAATAATCCTGAAGCTGCAGCCACGACGTTGGATCGGGTGCTGA
TGCTGCTTGTCAGCTACAACGCTCTTCATTGCTCTTTTGTCGATGGACAA
AGGCTCTACTCTCTTGCTCCTGTTTCTAAACACTTTGTTCGCAACAATCG
AGACGGCGTGTCGTTGCGTCCCTACATGGCCTTGTGTCTCGACAAGATCT
GCTTGGATGGCTGGTTTGGATTGAAAATCATATTCTTGAAGGACGAATTG
CGTTTATAAAGCCGCACGAATGCAAATCTATGATTACCTATGCGGCGACT
CAAGGGTCAATGATGTTTCAATAATGGAATGTTAACCCCACTTCTTTGCC
CTGGAGAAGGGCCTATAATCATCAAAAGGCTTGGACATGGTAAAAAACTT
GTTGATGTGGGCGGCGGCGTTAGGACTACCCCTAACTTGATTTTTTCCAA
TACCCCTTATTAAAGGGTTAAATCTGATCTGCCCTATGCCATTAAAGATC
GCCCTCCTTTTCCTGCTCTGCACACCGGGGGGGGATTTATTTCGAAATGT
CTCTCGGGGGGGTACCATTGTTTACAGCGGGAGGCGCCCACTTTTGGGGG
TGAGCCACTCTCAATTGTGGGGACAATGCGCAAAAGTCCTCGCATGCGGG
GGA
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