EY659305

Overview
NameEY659305
Unique NameEY659305
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY659305 vs. ExPASy Swiss-Prot
Match: SPCA_NANOT (Carboxypeptidase S1 homolog A OS=Nannizzia otae (strain CBS 113480) GN=SCPA PE=3 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 1.179e-11
Identity = 48/171 (28.07%), Postives = 70/171 (40.94%), Query Frame = 1 
Query:  127 EQLGPFIVNSDG*TLYRNEYAWNNVANVLFLETPSRVRFSY-------------SNTSSDYRN--PGDNNT-------SDDSYTFLTN--------------WFERFPQYK--NRDFFITGEIYAGHYVPQLA------------HTIVSKNTSKTIINLKCISIGNAWID 489
            ++ GP +VN+D  +   N Y+WNN  N+L+++ P++V FSY               T +D+ N  P  NNT       S + Y    N              WF+ FP+YK  N    I  E Y G Y P               HTI  +     I++L  + I N  +D
Sbjct:  116 QENGPCMVNNDSNSTTNNPYSWNNKVNMLYIDQPNQVGFSYDVPTNVTVNPINDEVTVADFSNGVPEQNNTLLVGTLGSQNPYATANNTQNAARSIWHFAQVWFQEFPEYKPNNDKVSIWTESYGGRYGPAFTSYFQEQNEKIKNHTITEEG-EMHILHLDTVGIINGCVD 285

HSP 2 Score: 32.3426 bits (72), Expect = 1.179e-11
Identity = 15/39 (38.46%), Postives = 21/39 (53.85%), Query Frame = 3 
Query:   24 FYYFAESPHSSSTKPMVLWLNGGP*CSSLGYGCHGTTGP 140
            F++F E+       P+ +WLNGGP  SS+  G     GP
Sbjct:   83 FFWFFEAREDPKNAPLSIWLNGGPGSSSM-IGLFQENGP 120
The following BLAST results are available for this feature:
BLAST of EY659305 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
SPCA_NANOT1.179e-1128.07Carboxypeptidase S1 homolog A OS=Nannizzia otae (s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-F09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659305 ID=EY659305; Name=EY659305; organism=Citrus sinensis; type=EST; length=883bp
ACCCCAAGACTGCGAAGACATTGTTCTACTATTTCGCTGAGTCCCCTCAC
AGTTCCTCCACCAAACCTATGGTGTTATGGCTAAATGGAGGTCCATGATG
CTCATCTCTTGGATATGGCTGCCATGGAACAACTGGGCCCTTTCATAGTA
AACAGCGATGGCTAAACCCTATACAGAAATGAATATGCTTGGAATAACGT
GGCAAATGTGCTATTCTTGGAGACACCATCAAGAGTCCGGTTCTCATATT
CAAATACCTCTTCAGACTACAGGAATCCCGGCGACAATAACACATCTGAC
GATTCTTATACTTTCCTCACGAATTGGTTCGAGAGATTTCCCCAATACAA
AAACCGTGACTTCTTTATTACTGGTGAGATCTATGCTGGCCACTATGTCC
CTCAACTTGCTCACACCATTGTCTCCAAGAACACAAGTAAAACAATCATC
AACCTCAAATGCATATCTATTGGGAATGCTTGGATAGATGATAATTTGTG
CACCAAAAGAATGTTAGACTCTTTCTGGACACATGCTCTCAATTCCTATG
AAACCAATGCCGAGATTAACAAATATTGTGACTATGCGACCGGTCAACTG
TCAACTTCGTGTGATCAATATCAAACTCTATGAGTTATGGCAGTTAGACA
GATTGATCTATACAACGTTTACGCTCCACTTTGCAAATCATCAGCACCAC
CACCTCCAACAGCCCTCGTTATCAGAGAATATGACCCCTGCTCCGAAACG
TCGTTTATACCTATTAAACGCTTGCCCAGTGCGAGCAGCTCTTNATGCGA
TACATACAACTGGTCAACTCGCANCGACTAGACATGGACCGACAGCCATN
AACTGTGCTTCCACATACAGCAGCTGGTAGCAG
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