Overview
Name EY659305
Unique Name EY659305
Type EST
Organism Citrus sinensis (Sweet orange)
Sequence length 883
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659305 vs. ExPASy Swiss-Prot
Match:
SPCA_NANOT (Carboxypeptidase S1 homolog A OS=Nannizzia otae (strain CBS 113480) GN=SCPA PE=3 SV=1)
HSP 1 Score: 57.7658 bits (138), Expect = 1.179e-11
Identity = 48/171 (28.07%), Postives = 70/171 (40.94%), Query Frame = 1
Query: 127 EQLGPFIVNSDG*TLYRNEYAWNNVANVLFLETPSRVRFSY-------------SNTSSDYRN--PGDNNT-------SDDSYTFLTN--------------WFERFPQYK--NRDFFITGEIYAGHYVPQLA------------HTIVSKNTSKTIINLKCISIGNAWID 489
++ GP +VN+D + N Y+WNN N+L+++ P++V FSY T +D+ N P NNT S + Y N WF+ FP+YK N I E Y G Y P HTI + I++L + I N +D
Sbjct: 116 QENGPCMVNNDSNSTTNNPYSWNNKVNMLYIDQPNQVGFSYDVPTNVTVNPINDEVTVADFSNGVPEQNNTLLVGTLGSQNPYATANNTQNAARSIWHFAQVWFQEFPEYKPNNDKVSIWTESYGGRYGPAFTSYFQEQNEKIKNHTITEEG-EMHILHLDTVGIINGCVD 285 HSP 2 Score: 32.3426 bits (72), Expect = 1.179e-11
Identity = 15/39 (38.46%), Postives = 21/39 (53.85%), Query Frame = 3
Query: 24 FYYFAESPHSSSTKPMVLWLNGGP*CSSLGYGCHGTTGP 140
F++F E+ P+ +WLNGGP SS+ G GP
Sbjct: 83 FFWFFEAREDPKNAPLSIWLNGGPGSSSM-IGLFQENGP 120
The following BLAST results are available for this feature:
BLAST of EY659305 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (
BLAST: Citrus ESTs to SwissProt )
Total hits: 91
100 200 300 400 500 600 700 800 Expect = 1.18e-11 / Id = 28.07 Expect = 1.18e-11 / Id = 28.07 Sequence SPCA_NANOT
Match Name E-value Identity Description
SPCA_NANOT 1.179e-11 28.07 Carboxypeptidase S1 homolog A OS=Nannizzia otae (s... [more]
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Properties
Property Name Value
Genbank description CS00-C1-101-008-F09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The
following sequences are available for this feature:
EST sequence
>EY659305 ID=EY659305; Name=EY659305; organism=Citrus sinensis; type=EST; length=883bp ACCCCAAGACTGCGAAGACATTGTTCTACTATTTCGCTGAGTCCCCTCAC AGTTCCTCCACCAAACCTATGGTGTTATGGCTAAATGGAGGTCCATGATG CTCATCTCTTGGATATGGCTGCCATGGAACAACTGGGCCCTTTCATAGTA AACAGCGATGGCTAAACCCTATACAGAAATGAATATGCTTGGAATAACGT GGCAAATGTGCTATTCTTGGAGACACCATCAAGAGTCCGGTTCTCATATT CAAATACCTCTTCAGACTACAGGAATCCCGGCGACAATAACACATCTGAC GATTCTTATACTTTCCTCACGAATTGGTTCGAGAGATTTCCCCAATACAA AAACCGTGACTTCTTTATTACTGGTGAGATCTATGCTGGCCACTATGTCC CTCAACTTGCTCACACCATTGTCTCCAAGAACACAAGTAAAACAATCATC AACCTCAAATGCATATCTATTGGGAATGCTTGGATAGATGATAATTTGTG CACCAAAAGAATGTTAGACTCTTTCTGGACACATGCTCTCAATTCCTATG AAACCAATGCCGAGATTAACAAATATTGTGACTATGCGACCGGTCAACTG TCAACTTCGTGTGATCAATATCAAACTCTATGAGTTATGGCAGTTAGACA GATTGATCTATACAACGTTTACGCTCCACTTTGCAAATCATCAGCACCAC CACCTCCAACAGCCCTCGTTATCAGAGAATATGACCCCTGCTCCGAAACG TCGTTTATACCTATTAAACGCTTGCCCAGTGCGAGCAGCTCTTNATGCGA TACATACAACTGGTCAACTCGCANCGACTAGACATGGACCGACAGCCATN AACTGTGCTTCCACATACAGCAGCTGGTAGCAG back to top