EY659303

Overview
NameEY659303
Unique NameEY659303
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length807
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP3_CAEEL (Actin-related protein 3 OS=Caenorhabditis elegans GN=arx-1 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.537e-46
Identity = 97/244 (39.75%), Postives = 140/244 (57.38%), Query Frame = 1
Query:   64 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR------------HQGVMVGMGQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTX*REIVRDIKEKLCYVALD 732
            M   ++ A V+DNG+G  K G+AG+  P+ + PS +                +  V  G+   D ++GDEA S      T+KYPI HGIV +WD ME+ W    +  LR  PE+H  LLTE PLN   NRE   +IMFE+FN P +Y+A+QAVL+L AS  +        TG+V+DSGDGV+H +P+ +GY +   I  + +AGRD+T ++  +L +R ++       E+ + IKEK CYV  D
Sbjct:    1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCPD 244          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ACTL9_HUMAN (Actin-like protein 9 OS=Homo sapiens GN=ACTL9 PE=2 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 4.619e-46
Identity = 92/222 (41.44%), Postives = 139/222 (62.61%), Query Frame = 1
Query:   76 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTX*REIVRDIKEKLCYVALDFEQ 741
            +   +V+D G+G CK GFAG  +P     +I+G    +    G     +++G+ A+     LTL  P+  GIV +WD  E IW H   ++LRVA  +HP+L ++ P +P  NREK+ ++ FE+  +PAMYVA Q+VLS+YA GR +G+V+D+G GV++TVP+++GY L HA  RLDLAG  LT +L ++L + G         ++V +IK   CYVA DF++
Sbjct:   48 KTGVVVIDMGTGTCKVGFAGQASPTYTVATILGCQPKKPATSGQSGLQTFIGEAARVLPE-LTLVQPLRSGIVVDWDAAELIWRHLLEHDLRVATHDHPLLFSDPPFSPATNREKLVEVAFESLRSPAMYVASQSVLSVYAHGRVSGLVVDTGHGVTYTVPVFQGYNLLHATERLDLAGNHLTAFLAEMLLQAGLPLGQQD-LDLVENIKHHYCYVASDFQK 267          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP3_DICDI (Actin-related protein 3 OS=Dictyostelium discoideum GN=arpC PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.029e-45
Identity = 93/235 (39.57%), Postives = 136/235 (57.87%), Query Frame = 1
Query:   85 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK------DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT-------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTX*REIVRDIKEKLCYVALDFEQRMG 750
            A+V+DNG+G  K G+AG++ P  + P+ +     +G      QK      D ++GDEA +      +  P++HG + NW  ME+ W H  +  LR  PE+H  LLTE PLN   NRE   +IMFETFN P +Y+A+QAVL+L AS  +       TG V+DSGDGV+H +PI EGY +  +I  + +AGRD++ Y+ +I+ ER  +       EI + +KE+  YV  D  +  G
Sbjct:    9 AVVIDNGTGYTKMGYAGNNDPSFIIPTTIATQSSKGKQTAASQKKGVEDLDFFIGDEAIANSKTYDMTNPVKHGQIENWTHMEQYWEHCVFKYLRCEPEDHYFLLTEPPLNAPENREFTAEIMFETFNVPGLYIAVQAVLALAASWTSKNAEKTLTGTVIDSGDGVTHVIPISEGYVIGSSIKHIPIAGRDISSYVQQIMREREPNIPPAESLEIAKRVKEQYSYVCPDIVKEFG 243          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP3_ACACA (Actin-related protein 3 OS=Acanthamoeba castellanii GN=ARP3 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.324e-44
Identity = 93/238 (39.08%), Postives = 133/238 (55.88%), Query Frame = 1
Query:   85 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG----------RPRHQGVMVGMGQK----DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTX*REIVRDIKEKLCYVALD 732
            A+V+DNG+G  K G+AG+  P+ + P+ +           R R        G+     D ++GDEA     +  +  P+ HG V NW  ME+ W H  +  LR  PE+H  LLTE PLN   NRE   +IMFETFN P +Y+A+QAVL+L AS  +        TG V+DSGDGV+H +P+ EGY +  +I  + LAGRD+T++++++L ER          E+ + IKE   YV  D
Sbjct:    8 AVVIDNGTGYTKMGYAGNTEPQYIIPTAIATKGIAEDPRCRARRWWCPWAAGKNIADLDFFIGDEAYENSKVYQITMPVRHGQVENWTHMEQFWEHCIFKYLRCEPEDHHFLLTEPPLNAPENREYTAEIMFETFNVPGLYIAVQAVLALAASWTSKQVTEKTLTGTVIDSGDGVTHVIPVAEGYVIGSSIKHIPLAGRDITNFVLQLLRERNEKIPPAETLEVAKRIKETFSYVCPD 245          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP3_DROME (Actin-related protein 3 OS=Drosophila melanogaster GN=Arp66B PE=1 SV=3)

HSP 1 Score: 177.948 bits (450), Expect = 5.647e-44
Identity = 95/232 (40.95%), Postives = 133/232 (57.33%), Query Frame = 1
Query:   85 ALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTX*REIVRDIKEKLCYVALD 732
            A V+D G+G  K GFAG+  P+ + PS         VG    + +  G+   D ++GDEA    G  ++KYP+ HG+V +WD ME+      +  LR  PE+H  LLTE PLN   NRE   +IMFETFN P +Y+A+QAVL+L AS  +        TGIV+DSGDGV+H +P+ EGY +   I  + +AGR++T ++  +L ER          E  + IKEK CY+  D
Sbjct:    7 ACVIDVGTGYSKLGFAGNKEPQFIIPSAIAIKESARVGDTNTRRITKGIEDLDFFIGDEAFDATGY-SIKYPVRHGLVEDWDLMERFLEQCVFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFETFNVPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKHCYICPD 237          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP3_NEUCR (Actin-related protein 3 OS=Neurospora crassa GN=arp-3 PE=2 SV=2)

HSP 1 Score: 176.407 bits (446), Expect = 1.643e-43
Identity = 99/256 (38.67%), Postives = 141/256 (55.08%), Query Frame = 1
Query:   85 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV--------------GRPR----------------HQGVMVGMGQKDSYVGDEAQSKRGI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTX*REIVRDIKEKLCYVALD 732
            A+V+DNG+G  K GFAG+D+P  VFP+ +              GRP                 H     G    D ++GDEA +        L YPI HG + NWD ME+ W ++ +  LRV PE+H  LLTE PLNP  NRE   +I FE+FN   +Y+A+QAVL+L AS  +        TG V+DSGDGV+H +P+ EGY +  +I  + +AGRD+T ++  +L +RG   ++    +  ++IKE+ CYV  D
Sbjct:    7 AVVMDNGTGFSKLGFAGNDSPSFVFPTAIATKSPSAGTGGSGSGRPAVANKPSFLTGGAGPGGHLSAKRGTEDLDYFIGDEAVAAANGPGYGLHYPIRHGQIENWDHMERFWSNSIFKYLRVEPEDHHFLLTEPPLNPPENRENTAEIFFESFNCAGLYIAVQAVLALAASWTSSKVQDRSLTGTVIDSGDGVTHVIPVAEGYVIGSSIKSIPIAGRDITYFVQSLLRDRGEPDSSL---KTAQEIKEEYCYVCPD 259          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP3B_MOUSE (Actin-related protein 3B OS=Mus musculus GN=Actr3b PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.803e-43
Identity = 94/230 (40.87%), Postives = 133/230 (57.83%), Query Frame = 1
Query:   91 VVDNGSGMCKAGFAGDDAPRAVFPSIVG--------RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTX*REIVRDIKEKLCYVALD 732
            VVD G+G  K G+AG+  P+ + PS +             + V+ G+   D ++GDEA  K    T K+PI HGIV +WD ME+      +  LR  PE+H  L+TE PLN   NRE + +IMFE+FN P +Y+A+QAVL+L AS  +        TGIV+DSGDGV+H +P+ EGY +   I  + +AGRD+T ++ ++L ER          E  + IKEK CY+  D
Sbjct:    9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDFFIGDEAIDKPTYAT-KWPIRHGIVEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPD 237          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP3B_HUMAN (Actin-related protein 3B OS=Homo sapiens GN=ACTR3B PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.660e-43
Identity = 93/230 (40.43%), Postives = 133/230 (57.83%), Query Frame = 1
Query:   91 VVDNGSGMCKAGFAGDDAPRAVFPSIVG--------RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTX*REIVRDIKEKLCYVALD 732
            VVD G+G  K G+AG+  P+ + PS +             + V+ G+   D ++GDEA  K    T K+PI HGI+ +WD ME+      +  LR  PE+H  L+TE PLN   NRE + +IMFE+FN P +Y+A+QAVL+L AS  +        TGIV+DSGDGV+H +P+ EGY +   I  + +AGRD+T ++ ++L ER          E  + IKEK CY+  D
Sbjct:    9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRRVLRGVDDLDFFIGDEAIDKPTYAT-KWPIRHGIIEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPD 237          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ACT_CHERU (Actin (Fragment) OS=Chenopodium rubrum PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.780e-43
Identity = 84/85 (98.82%), Postives = 84/85 (98.82%), Query Frame = 1
Query:  316 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 570
            KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG
Sbjct:    1 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 85          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP3_RAT (Actin-related protein 3 OS=Rattus norvegicus GN=Actr3 PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.817e-42
Identity = 95/232 (40.95%), Postives = 132/232 (56.90%), Query Frame = 1
Query:   85 ALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTX*REIVRDIKEKLCYVALD 732
            A VVD G+G  K G+AG+  P+ + PS         VG    + VM G+   D ++GDEA  K    T K+PI HGIV +WD ME+      +  LR  PE+H  LLTE PLN   NRE   +IMFE+FN P +Y+A+QAVL+L AS  +        TG V+DSGDGV+H +P+ EGY +   I  + +AGRD+T ++ ++L +R          E  + +KE+  YV  D
Sbjct:    7 ACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKPTYAT-KWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPD 237          
The following BLAST results are available for this feature:
BLAST of EY659303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 483
Match NameE-valueIdentityDescription
ARP3_CAEEL3.537e-4639.75Actin-related protein 3 OS=Caenorhabditis elegans ... [more]
ACTL9_HUMAN4.619e-4641.44Actin-like protein 9 OS=Homo sapiens GN=ACTL9 PE=2... [more]
ARP3_DICDI1.029e-4539.57Actin-related protein 3 OS=Dictyostelium discoideu... [more]
ARP3_ACACA4.324e-4439.08Actin-related protein 3 OS=Acanthamoeba castellani... [more]
ARP3_DROME5.647e-4440.95Actin-related protein 3 OS=Drosophila melanogaster... [more]
ARP3_NEUCR1.643e-4338.67Actin-related protein 3 OS=Neurospora crassa GN=ar... [more]
ARP3B_MOUSE2.803e-4340.87Actin-related protein 3B OS=Mus musculus GN=Actr3b... [more]
ARP3B_HUMAN3.660e-4340.43Actin-related protein 3B OS=Homo sapiens GN=ACTR3B... [more]
ACT_CHERU4.780e-4398.82Actin (Fragment) OS=Chenopodium rubrum PE=3 SV=1[more]
ARP3_RAT1.817e-4240.95Actin-related protein 3 OS=Rattus norvegicus GN=Ac... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-F06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659303 ID=EY659303; Name=EY659303; organism=Citrus sinensis; type=EST; length=807bp
CTCAAGTGACGTTTGTCCCAGTGTTCCACGATTCTCTAACGTACTAATTT
CAACAAATTCAAAATGTGTGACGAAGAAGTAGCAGCACTCGTTGTCGACA
ATGGATCCGGTATGTGCAAAGCCGGTTTTGCCGGTGATGATGCTCCCAGA
GCCGTATTCCCCTCAATCGTCGGTCGCCCAAGGCATCAGGGTGTCATGGT
TGGTATGGGACAAAAAGACAGTTATGTTGGAGATGAAGCTCAATCTAAGA
GAGGTATCCTTACCTTGAAATACCCCATCGAACACGGTATTGTCACAAAC
TGGGACGATATGGAGAAGATCTGGCATCACACCTTCTACAATGAACTCCG
AGTAGCGCCAGAAGAACACCCTGTCCTCTTGACAGAAGCTCCCCTGAACC
CAAAAGCTAACAGAGAAAAGATGACCCAAATCATGTTTGAAACCTTCAAC
ACACCCGCCATGTATGTAGCTATCCAAGCTGTTCTCTCTCTGTATGCTTC
TGGTCGTACCACTGGTATCGTTCTTGATTCAGGAGATGGTGTTTCCCACA
CAGTGCCAATCTATGAAGGGTATGCCTTACCTCATGCTATCCTNCGTTTG
GACTTGGCTGGTCGTGACTTGACCGACTACCTCATGAAGATCCTTACAGA
AAGAGGNTACAGTTTCACAACCACANGCTGAAGAGAAATCGTCCGTGATA
TCAAAGAAAAATTATGTTATGTAGCTTTAGACTTTGAACAAAGAATGGGC
ACCGCTGCTTNCTCAAAGCTCCTAGAAAAATCCTATGAATGGCTGATGGG
NCAAGTA
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