EY659303

Overview
NameEY659303
Unique NameEY659303
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length807
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7645 contig Csv1_Contig7645:13..819. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP3_ORYSI (Actin-related protein 3 OS=Oryza sativa subsp. indica GN=ARP3 PE=2 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 6.461e-40
Identity = 91/243 (37.45%), Postives = 133/243 (54.73%), Query Frame = 1
Query:   85 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV-------GRPRHQ------------GVMVGMGQKDSYVGDEAQSKR---GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTX*REIVRDIKEKLCYVALD 732
            A+V+DNG+G  K GFAG+  P  + P++V       G+ R              GVM  +   D ++G++A ++        L YPI +G V NWD ME+ W    +N LR  PE+H  LLTE+PL P   RE   +IMFETFN P +Y+A Q VL+L A   T     TG+V+D GDG +H VP+ +GY +  +I  + + G+D+T ++ ++L ERG         ++ R +KE  CY   D
Sbjct:    8 AVVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSAGVMADL---DFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDPEDHYFLLTESPLTPPETREYTGEIMFETFNVPGLYIACQPVLALAAGYTTTKCEMTGVVVDVGDGATHIVPVADGYVIGSSIRSIPITGKDVTQFIQQLLKERGEHIPPEESFDVARRVKEMYCYTCSD 247          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP4_ARATH (Actin-related protein 4 OS=Arabidopsis thaliana GN=ARP4 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.188e-39
Identity = 87/217 (40.09%), Postives = 128/217 (58.99%), Query Frame = 1
Query:   73 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--------VGMGQKDS-------------YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 657
            +EV+A+VVD GS  CKAG+AG+DAP+AVFPS++G       M             +DS             YVG +A S +R  + +  PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN +  REK  ++MFE +  PA+++A   VL+ +A+GR T +V+D G G +   P+++GY L  A++   L G  LTD L+K L  +G
Sbjct:    5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKTESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKG 221          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP4_ORYSJ (Actin-related protein 4 OS=Oryza sativa subsp. japonica GN=ARP4 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.714e-38
Identity = 82/220 (37.27%), Postives = 123/220 (55.91%), Query Frame = 1
Query:   73 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------------------------VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 657
            +EV+A+V+D GS  CKAG+AGDD P+AVFPS+VG     G                         V     ++  YVG E + +R  + +  P++ G VT+WD ++ IW+H F   L + PEEHP+L+ E   N    REK  ++MFE +  PA+++A  AVL+ +ASGR T +V+DSG G +    +++GY L  ++    + G  LTD +MK L  +G
Sbjct:    5 DEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSVVGSIEQTGETDEAKADKEAEAASDSKNGAKPMDVDKAKTKRKLYVGQELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAFRQRLLINPEEHPMLIAEPSTNTGQQREKAAELMFEKYKVPALFLAKNAVLTSFASGRATSLVVDSGGGSTVVAAVHDGYVLQKSVATSPIGGEFLTDCMMKSLESKG 224          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP4_ORYSI (Actin-related protein 4 OS=Oryza sativa subsp. indica GN=ARP4 PE=2 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 2.714e-38
Identity = 82/220 (37.27%), Postives = 123/220 (55.91%), Query Frame = 1
Query:   73 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG-------------------------VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 657
            +EV+A+V+D GS  CKAG+AGDD P+AVFPS+VG     G                         V     ++  YVG E + +R  + +  P++ G VT+WD ++ IW+H F   L + PEEHP+L+ E   N    REK  ++MFE +  PA+++A  AVL+ +ASGR T +V+DSG G +    +++GY L  ++    + G  LTD +MK L  +G
Sbjct:    5 DEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSVVGSIEQTGETDEAKADKEAEAASDSKNGAKPMDVDKAKTKRKLYVGQELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAFRQRLLINPEEHPMLIAEPSTNTGQQREKAAELMFEKYKVPALFLAKNAVLTSFASGRATSLVVDSGGGSTVVAAVHDGYVLQKSVATSPIGGEFLTDCMMKSLESKG 224          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ACL6B_RAT (Actin-like protein 6B OS=Rattus norvegicus GN=Actl6b PE=1 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 1.221e-30
Identity = 71/188 (37.77%), Postives = 114/188 (60.64%), Query Frame = 1
Query:   73 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG--RPRHQGVMVGMGQKDS-----YVGDEA-QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 612
            +EV ALV D GS   +AG+AG+D P+A FP+ VG       G +   G+K+      ++   A    R    +  P+++G++ +W+    I  HT+   ++  P  HPVL++EAP N +A REK+T++MFE +N PA ++   AVL+ +A+GR+TG+VLDSG   +  +P+++GY L   I++  LAG
Sbjct:    9 DEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGEKEKKGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVHDGYVLQQGIVKSPLAG 196          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ACL6B_MOUSE (Actin-like protein 6B OS=Mus musculus GN=Actl6b PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.221e-30
Identity = 71/188 (37.77%), Postives = 114/188 (60.64%), Query Frame = 1
Query:   73 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG--RPRHQGVMVGMGQKDS-----YVGDEA-QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 612
            +EV ALV D GS   +AG+AG+D P+A FP+ VG       G +   G+K+      ++   A    R    +  P+++G++ +W+    I  HT+   ++  P  HPVL++EAP N +A REK+T++MFE +N PA ++   AVL+ +A+GR+TG+VLDSG   +  +P+++GY L   I++  LAG
Sbjct:    9 DEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGEKEKKGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVHDGYVLQQGIVKSPLAG 196          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ACL6B_BOVIN (Actin-like protein 6B OS=Bos taurus GN=ACTL6B PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.221e-30
Identity = 71/188 (37.77%), Postives = 114/188 (60.64%), Query Frame = 1
Query:   73 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG--RPRHQGVMVGMGQKDS-----YVGDEA-QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 612
            +EV ALV D GS   +AG+AG+D P+A FP+ VG       G +   G+K+      ++   A    R    +  P+++G++ +W+    I  HT+   ++  P  HPVL++EAP N +A REK+T++MFE +N PA ++   AVL+ +A+GR+TG+VLDSG   +  +P+++GY L   I++  LAG
Sbjct:    9 DEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGEKEKKGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVHDGYVLQQGIVKSPLAG 196          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ACL6B_HUMAN (Actin-like protein 6B OS=Homo sapiens GN=ACTL6B PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.083e-30
Identity = 71/188 (37.77%), Postives = 113/188 (60.11%), Query Frame = 1
Query:   73 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG--RPRHQGVMVGMGQKDS-----YVGDEA-QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 612
            +EV ALV D GS   +AG+AG+D P+A FP+ VG       G +   G K+      ++   A    R    +  P+++G++ +W+    I  HT+   ++  P  HPVL++EAP N +A REK+T++MFE +N PA ++   AVL+ +A+GR+TG+VLDSG   +  +P+++GY L   I++  LAG
Sbjct:    9 DEVGALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGDKEKKGKIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLDSGATHTTAIPVHDGYVLQQGIVKSPLAG 196          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ACTL8_HUMAN (Actin-like protein 8 OS=Homo sapiens GN=ACTL8 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.721e-30
Identity = 82/230 (35.65%), Postives = 125/230 (54.35%), Query Frame = 1
Query:   88 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGR-PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTX*REIVRDIKEKLCYV------ALDFEQRMGTA 756
            +++D+GSG  KAG AG + P+ VFP+IV   P  +       ++   +G +        T  YPIE G + NW+ ++ +W     N  R   E  PV++TE PL   A+R+KM +I+FE  + P++ +A Q  +SLYASG  TG+V+DSG G++   P ++G  LP +   L+ AG+DL+ YL+K L +           E V   +   CYV      ALDF +R  +A
Sbjct:    6 VIIDHGSGFLKAGTAGWNEPQMVFPNIVNYLPCKENPGPSYARRRVSLGIDICHPD---TFSYPIERGRILNWEGVQYLWSFVLENHRR-EQEVPPVIITETPLREPADRKKMLEILFELLHVPSVLLADQLQMSLYASGLLTGVVVDSGYGLTRVQPFHQGRPLPASGKTLEFAGQDLSAYLLKSLFKEDCDRRCLFQLETVAVTQMNKCYVPQNLGEALDFRERQQSA 231          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ACL6A_MACFA (Actin-like protein 6A OS=Macaca fascicularis GN=ACTL6A PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.553e-30
Identity = 73/204 (35.78%), Postives = 118/204 (57.84%), Query Frame = 1
Query:   73 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG----RPRHQGVMVGMGQKDS------YVGDEA-QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 651
            +EV ALV D GS   +AG+AG+D P+  FP+ +G    R     +M   G K        Y+   A +  R  +    P+++G+V +WD  + I  HT+   ++     HPVL++EAP N +A REK+T++MFE +N PA ++   AVL+ +A+GR+TG++LDSG   +  +P+++GY L   I++  LAG  +T    ++  E
Sbjct:    9 DEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGMVVERDDGSTLMEIDGDKGKQGGPTYYIATNALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAKREKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFITMQCRELFQE 212          
The following BLAST results are available for this feature:
BLAST of EY659303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 483
Match NameE-valueIdentityDescription
ARP3_ORYSI6.461e-4037.45Actin-related protein 3 OS=Oryza sativa subsp. ind... [more]
ARP4_ARATH4.188e-3940.09Actin-related protein 4 OS=Arabidopsis thaliana GN... [more]
ARP4_ORYSJ2.714e-3837.27Actin-related protein 4 OS=Oryza sativa subsp. jap... [more]
ARP4_ORYSI2.714e-3837.27Actin-related protein 4 OS=Oryza sativa subsp. ind... [more]
ACL6B_RAT1.221e-3037.77Actin-like protein 6B OS=Rattus norvegicus GN=Actl... [more]
ACL6B_MOUSE1.221e-3037.77Actin-like protein 6B OS=Mus musculus GN=Actl6b PE... [more]
ACL6B_BOVIN1.221e-3037.77Actin-like protein 6B OS=Bos taurus GN=ACTL6B PE=2... [more]
ACL6B_HUMAN2.083e-3037.77Actin-like protein 6B OS=Homo sapiens GN=ACTL6B PE... [more]
ACTL8_HUMAN2.721e-3035.65Actin-like protein 8 OS=Homo sapiens GN=ACTL8 PE=2... [more]
ACL6A_MACFA3.553e-3035.78Actin-like protein 6A OS=Macaca fascicularis GN=AC... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-F06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659303 ID=EY659303; Name=EY659303; organism=Citrus sinensis; type=EST; length=807bp
CTCAAGTGACGTTTGTCCCAGTGTTCCACGATTCTCTAACGTACTAATTT
CAACAAATTCAAAATGTGTGACGAAGAAGTAGCAGCACTCGTTGTCGACA
ATGGATCCGGTATGTGCAAAGCCGGTTTTGCCGGTGATGATGCTCCCAGA
GCCGTATTCCCCTCAATCGTCGGTCGCCCAAGGCATCAGGGTGTCATGGT
TGGTATGGGACAAAAAGACAGTTATGTTGGAGATGAAGCTCAATCTAAGA
GAGGTATCCTTACCTTGAAATACCCCATCGAACACGGTATTGTCACAAAC
TGGGACGATATGGAGAAGATCTGGCATCACACCTTCTACAATGAACTCCG
AGTAGCGCCAGAAGAACACCCTGTCCTCTTGACAGAAGCTCCCCTGAACC
CAAAAGCTAACAGAGAAAAGATGACCCAAATCATGTTTGAAACCTTCAAC
ACACCCGCCATGTATGTAGCTATCCAAGCTGTTCTCTCTCTGTATGCTTC
TGGTCGTACCACTGGTATCGTTCTTGATTCAGGAGATGGTGTTTCCCACA
CAGTGCCAATCTATGAAGGGTATGCCTTACCTCATGCTATCCTNCGTTTG
GACTTGGCTGGTCGTGACTTGACCGACTACCTCATGAAGATCCTTACAGA
AAGAGGNTACAGTTTCACAACCACANGCTGAAGAGAAATCGTCCGTGATA
TCAAAGAAAAATTATGTTATGTAGCTTTAGACTTTGAACAAAGAATGGGC
ACCGCTGCTTNCTCAAAGCTCCTAGAAAAATCCTATGAATGGCTGATGGG
NCAAGTA
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