EY659303

Overview
NameEY659303
Unique NameEY659303
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length807
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7645 contig Csv1_Contig7645:13..819. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ACL6A_HUMAN (Actin-like protein 6A OS=Homo sapiens GN=ACTL6A PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.641e-30
Identity = 72/204 (35.29%), Postives = 117/204 (57.35%), Query Frame = 1
Query:   73 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG----RPRHQGVMVGMGQKDSYVG-------DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 651
            +EV ALV D GS   +AG+AG+D P+  FP+ +G    R     +M   G K    G       +  +  R  +    P+++G+V +WD  + I  HT+   ++     HPVL++EAP N +A REK+T++MFE +N PA ++   AVL+ +A+GR+TG++LDSG   +  +P+++GY L   I++  LAG  +T    ++  E
Sbjct:    9 DEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGMVVERDDGSTLMEIDGDKGKQGGPTYYIDTNALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAKREKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFITMQCRELFQE 212          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ACL6A_MOUSE (Actin-like protein 6A OS=Mus musculus GN=Actl6a PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.764e-29
Identity = 71/204 (34.80%), Postives = 117/204 (57.35%), Query Frame = 1
Query:   73 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG----RPRHQGVMVGMGQKDSYVG-------DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 651
            +EV ALV D GS   +AG+AG+D P+  FP+ +G    R     +M   G K    G       +  +  R  +    P+++G+V +WD  + I  HT+   ++     HPVL++EAP N +A REK+T++MFE ++ PA ++   AVL+ +A+GR+TG++LDSG   +  +P+++GY L   I++  LAG  +T    ++  E
Sbjct:    9 DEVGALVFDIGSYTVRAGYAGEDCPKVDFPTAIGVVLERDDGSTMMEIDGDKGKQGGPTYYIDTNALRVPRENMEAISPLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAPWNTRAKREKLTELMFEHYSIPAFFLCKTAVLTAFANGRSTGLILDSGATHTTAIPVHDGYVLQQGIVKSPLAGDFITMQCRELFQE 212          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP6_ARATH (Actin-related protein 6 OS=Arabidopsis thaliana GN=ARP6 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.384e-26
Identity = 76/242 (31.40%), Postives = 124/242 (51.24%), Query Frame = 1
Query:   88 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTX*REIVRDIKEKLCYVALDFEQRMGTAAXSKLLEKS 783
            +V+DNG G+ KAG  G+  P  V P+ + +P      +      + + DE         ++ PI+ G + N D   +IW H F + L +AP    +LLTEAPL+  + +    +++FE F   ++Y+A  Q+++ LY + R            +V+D G   +H VP+   + L HAI R+DL G+  T+YL ++++ R  S        +V D KEKLC+V+LD  + +  A     L KS
Sbjct:    5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AVRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDFGFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGGKAFTNYLKELVSYR--SINVMDETFLVDDAKEKLCFVSLDLLRDLRLARNGNTLIKS 241          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: CT134_MOUSE (Putative uncharacterized actin family protein C20orf134 homolog OS=Mus musculus PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.057e-26
Identity = 58/163 (35.58%), Postives = 97/163 (59.51%), Query Frame = 1
Query:  271 YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE-------RGYSFTTTX*REIVRDIKEKLCYVALDFE 738
            +PI+HG+V +WD +E +W       L+V PE+ PVL++++P  P   REK+ +++FE    PA ++A  A+L+L + G  +G+ +++G GV H  PIY G++   A  RL++AG  L+ Y   +L         +G S      R+ V  +K++ CYV+LDF+
Sbjct:   37 HPIKHGVVVDWDALEGLWERLMVGGLQVHPEQWPVLVSDSPSAPPKGREKVAELLFEALTVPACHMANTALLALCSIGAFSGLAVEAGAGVCHATPIYAGHSWHKATFRLNVAGSTLSRYFRDLLVAACPDLQLQGLS------RKTVTQLKKRCCYVSLDFQ 193          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP6_ORYSJ (Actin-related protein 6 OS=Oryza sativa subsp. japonica GN=ARP6 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.635e-25
Identity = 71/226 (31.42%), Postives = 118/226 (52.21%), Query Frame = 1
Query:   88 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI---LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA-IQAVLSLYASGR-------TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTX*REIVRDIKEKLCYVALD 732
            +V+DNG G+ KAGF GD  P AV P+ + +P         G K   V D+ Q++      +TL+ PI+ G + N +   ++W     N L+V P    +LL E   NP A +    +++FE     ++ VA   +++ LY + R          +V+D G   +H  P+ + + L +A+ R+DL G+ LT+YL ++++ R  S        ++ D KEKLC+V+LD
Sbjct:    8 VVLDNGGGLLKAGFGGDMNPTAVVPNCMAKPP--------GSKKWLVADQLQAQDVDVTGMTLRRPIDRGYLINQEVQREVWERVIRNLLQVDPNNSSLLLVEPQFNPPALQHATDELVFEELGFKSLCVADAPSLVHLYEASRQPSLFRAQCSLVVDCGFSFTHASPVLQNFTLNYAVRRMDLGGKALTNYLKELISYR--SLNVMDETLLIDDAKEKLCFVSLD 223          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP6_ORYSI (Actin-related protein 6 OS=Oryza sativa subsp. indica GN=ARP6 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.635e-25
Identity = 71/226 (31.42%), Postives = 118/226 (52.21%), Query Frame = 1
Query:   88 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI---LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA-IQAVLSLYASGR-------TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTX*REIVRDIKEKLCYVALD 732
            +V+DNG G+ KAGF GD  P AV P+ + +P         G K   V D+ Q++      +TL+ PI+ G + N +   ++W     N L+V P    +LL E   NP A +    +++FE     ++ VA   +++ LY + R          +V+D G   +H  P+ + + L +A+ R+DL G+ LT+YL ++++ R  S        ++ D KEKLC+V+LD
Sbjct:    8 VVLDNGGGLLKAGFGGDMNPTAVVPNCMAKPP--------GSKKWLVADQLQAQDVDVTGMTLRRPIDRGYLINQEVQREVWERVIRNLLQVDPNNSSLLLVEPQFNPPALQHATDELVFEELGFKSLCVADAPSLVHLYEASRQPSLFRAQCSLVVDCGFSFTHASPVLQNFTLNYAVRRMDLGGKALTNYLKELISYR--SLNVMDETLLIDDAKEKLCFVSLD 223          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP5_SCHPO (Actin-like protein arp5 OS=Schizosaccharomyces pombe GN=arp5 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.871e-25
Identity = 67/234 (28.63%), Postives = 122/234 (52.14%), Query Frame = 1
Query:   88 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL-KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTX*REIVRDIKEKLCYVALDFEQRMGTAAXSKLLEK 780
            LV+DNGS   +AG+ G+  P+ VF ++V R R +     + +  + VG++   + G  ++ + P E  +++NWD ME++  +TF  +L +   EHP+ +TE   NP   R  MT+++FE +N P++   I  + S Y + +  ++GIVL+ G+  SH +P+  G  +     R+   G   + YL+K+   +  SF           +    C+V+ D+   +  A    +LE+
Sbjct:   27 LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYRDRK----LSRTSTLVGNDTLIEVGSRSIARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICMTEPLANPTYVRSTMTELLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNGERILSEAKRISWGGSQSSSYLLKLFQIKYPSFPIKMLPSQAELLMHDHCHVSSDYTHDIAHALDRDILER 255          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP4_YARLI (Actin-related protein 4 OS=Yarrowia lipolytica GN=ARP4 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.231e-24
Identity = 66/206 (32.04%), Postives = 103/206 (50.00%), Query Frame = 1
Query:   73 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY-------VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 669
            +EVA LV+D GS   + G+AG+D P+ V  +  G    + V +     ++        VGD A      + + +P+  GIV +WD ++ IW ++    L    + HP++LTE   N +AN+ K  +I FE+   PA Y+   AV S +A+G+   +VLD G  V+   P+ +G  L     R   AG  L   + K+L  RG   T
Sbjct:   14 DEVATLVIDTGSSYTRVGYAGEDTPKLVVSTECGLMADEDVEMEDDTSNTTKKLNKYKVGDSANLPLPNMEVLHPLTDGIVADWDAVQNIWEYSLAR-LNADTKTHPLMLTEPCWNTQANKLKALEIAFESLEVPASYLVKDAVASAFAAGKGNALVLDVGSEVASVTPVIDGLVLYKPARRSQYAGDYLDRQIKKVLVSRGIDLT 218          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP4_SCHPO (Actin-related protein 4 OS=Schizosaccharomyces pombe GN=arp4 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.889e-23
Identity = 64/196 (32.65%), Postives = 101/196 (51.53%), Query Frame = 1
Query:   73 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY 660
            +EV+A+V+D GS   + GF+G+D P+ V PS  G       + G    + Y+    +S  G + +K  I +G V NWD    +W +    +L+  P EHP+L+TE   NP  NR K  + MFE+   PA Y+A Q   + +ASG+ T  ++D G   S    IY+G+ L         +G  + D L + L ++ +
Sbjct:    9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGEFSDGRRLFG----EEYI---YKSNPG-MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLETMFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVLQKGYQVQHFSGNAINDILAQTLRDKNF 196          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP6_NEUCR (Actin-like protein arp-6 OS=Neurospora crassa GN=arp-6 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.599e-22
Identity = 78/261 (29.89%), Postives = 126/261 (48.28%), Query Frame = 1
Query:   88 LVVDNGSGMCKAGFAGDDA----PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNEL---RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS----GRTTGIVLDS--------GDGVSHTV--PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTX*REIVRDIKEKLCYVALDFEQRMGTAAXSKLLEKSYEWLMG 801
            LV+DNG+   KAGF  DD     PR + P+ + R RH+ +         YVG E +  +    L  + P+E G + NW+  ++IW   F+++    +  P +  ++LTE P +  + +    QI+FE +   + Y  +  V + Y       RT    +DS          G SHT   PI +G  L  AI RLD+ G+ +T+YL ++L+ R +         IV ++KE +CY +LDF+  +         EK  ++L G
Sbjct:   22 LVLDNGADTIKAGFVSDDKSDGKPR-IIPNCLARDRHRKI---------YVGSELEKCKDFSELAFRRPVEKGFIVNWEAQKEIWDREFFDDKAAQKCDPSDTRLILTEQPNSLPSLQTHCDQIVFEEYGFASYYRGLGPVFNAYRDIQSIFRTPQSTIDSPAQVILLIDSGYSHTTVTPILQGRPLHPAIRRLDVGGKLMTNYLTRLLSVRHFDMRNEP--YIVNEMKEAVCYTSLDFKGDLEKTWKGTRGEKREDYLSG 270          
The following BLAST results are available for this feature:
BLAST of EY659303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 483
Match NameE-valueIdentityDescription
ACL6A_HUMAN4.641e-3035.29Actin-like protein 6A OS=Homo sapiens GN=ACTL6A PE... [more]
ACL6A_MOUSE1.764e-2934.80Actin-like protein 6A OS=Mus musculus GN=Actl6a PE... [more]
ARP6_ARATH2.384e-2631.40Actin-related protein 6 OS=Arabidopsis thaliana GN... [more]
CT134_MOUSE9.057e-2635.58Putative uncharacterized actin family protein C20o... [more]
ARP6_ORYSJ2.635e-2531.42Actin-related protein 6 OS=Oryza sativa subsp. jap... [more]
ARP6_ORYSI2.635e-2531.42Actin-related protein 6 OS=Oryza sativa subsp. ind... [more]
ARP5_SCHPO5.871e-2528.63Actin-like protein arp5 OS=Schizosaccharomyces pom... [more]
ARP4_YARLI2.231e-2432.04Actin-related protein 4 OS=Yarrowia lipolytica GN=... [more]
ARP4_SCHPO1.889e-2332.65Actin-related protein 4 OS=Schizosaccharomyces pom... [more]
ARP6_NEUCR1.599e-2229.89Actin-like protein arp-6 OS=Neurospora crassa GN=a... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-F06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659303 ID=EY659303; Name=EY659303; organism=Citrus sinensis; type=EST; length=807bp
CTCAAGTGACGTTTGTCCCAGTGTTCCACGATTCTCTAACGTACTAATTT
CAACAAATTCAAAATGTGTGACGAAGAAGTAGCAGCACTCGTTGTCGACA
ATGGATCCGGTATGTGCAAAGCCGGTTTTGCCGGTGATGATGCTCCCAGA
GCCGTATTCCCCTCAATCGTCGGTCGCCCAAGGCATCAGGGTGTCATGGT
TGGTATGGGACAAAAAGACAGTTATGTTGGAGATGAAGCTCAATCTAAGA
GAGGTATCCTTACCTTGAAATACCCCATCGAACACGGTATTGTCACAAAC
TGGGACGATATGGAGAAGATCTGGCATCACACCTTCTACAATGAACTCCG
AGTAGCGCCAGAAGAACACCCTGTCCTCTTGACAGAAGCTCCCCTGAACC
CAAAAGCTAACAGAGAAAAGATGACCCAAATCATGTTTGAAACCTTCAAC
ACACCCGCCATGTATGTAGCTATCCAAGCTGTTCTCTCTCTGTATGCTTC
TGGTCGTACCACTGGTATCGTTCTTGATTCAGGAGATGGTGTTTCCCACA
CAGTGCCAATCTATGAAGGGTATGCCTTACCTCATGCTATCCTNCGTTTG
GACTTGGCTGGTCGTGACTTGACCGACTACCTCATGAAGATCCTTACAGA
AAGAGGNTACAGTTTCACAACCACANGCTGAAGAGAAATCGTCCGTGATA
TCAAAGAAAAATTATGTTATGTAGCTTTAGACTTTGAACAAAGAATGGGC
ACCGCTGCTTNCTCAAAGCTCCTAGAAAAATCCTATGAATGGCTGATGGG
NCAAGTA
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