EY659303

Overview
NameEY659303
Unique NameEY659303
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length807
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP4A_ARATH (Actin-related protein 4A OS=Arabidopsis thaliana GN=ARP4A PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.652e-22
Identity = 55/132 (41.67%), Postives = 79/132 (59.85%), Query Frame = 1
Query:   73 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------------MGQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 420
            +EV+A+VVD GS  CKAG+AG+DAP+AVFPS+VG     G+ +                 G++  Y G +A + +R  + +  P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN +  REK
Sbjct:    5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP7_ORYSJ (Actin-related protein 7 OS=Oryza sativa subsp. japonica GN=ARP7 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 3.015e-21
Identity = 69/195 (35.38%), Postives = 98/195 (50.26%), Query Frame = 1
Query:   85 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 663
            A+VVD GS + KAG A  D +P  V PS           + +  +D  +GD A  +  +     P+  G V +WD ME + ++  Y+ +     +E  +L TE    PKA RE++ Q+MFE FN    Y + QAVLSLYA GR +G  +D G G     P+ EG     A  R D+ G DLT+   + L +   S
Sbjct:    3 AVVVDAGSKLLKAGIALPDQSPSLVMPS----------KMKLEVEDGQMGDGAVVEEVV----QPVVRGFVKDWDAMEDLLNYVLYSNIGWEIGDEGQILFTEPLFTPKALREQLAQLMFEKFNVSGFYDSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVCEGAVQHIASKRFDIGGTDLTNLFAEELKKSNSS 183          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP7_ORYSI (Actin-related protein 7 OS=Oryza sativa subsp. indica GN=ARP7 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 3.015e-21
Identity = 69/195 (35.38%), Postives = 98/195 (50.26%), Query Frame = 1
Query:   85 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 663
            A+VVD GS + KAG A  D +P  V PS           + +  +D  +GD A  +  +     P+  G V +WD ME + ++  Y+ +     +E  +L TE    PKA RE++ Q+MFE FN    Y + QAVLSLYA GR +G  +D G G     P+ EG     A  R D+ G DLT+   + L +   S
Sbjct:    3 AVVVDAGSKLLKAGIALPDQSPSLVMPS----------KMKLEVEDGQMGDGAVVEEVV----QPVVRGFVKDWDAMEDLLNYVLYSNIGWEIGDEGQILFTEPLFTPKALREQLAQLMFEKFNVSGFYDSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVCEGAVQHIASKRFDIGGTDLTNLFAEELKKSNSS 183          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ACT1_PSEMZ (Actin-1 (Fragment) OS=Pseudotsuga menziesii PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.015e-21
Identity = 44/45 (97.78%), Postives = 45/45 (100.00%), Query Frame = 1
Query:  271 YPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 405
            YPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK
Sbjct:    1 YPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 45          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP7_ARATH (Actin-related protein 7 OS=Arabidopsis thaliana GN=ARP7 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.773e-21
Identity = 71/182 (39.01%), Postives = 93/182 (51.10%), Query Frame = 1
Query:   85 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 624
            ALVVD GS   KAG A  D +P  + PS + R      MV  G   +   D   +    +TL  PIE G++ +WD ME +  +  Y  L      E  +L T+    PKA RE++ Q+MFETFN    Y + QAVLSLYA GR +G  +D G G     P+ EG     A  R +L G +LT
Sbjct:    3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDVTLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFNVSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEGAVQHIASKRFELGGTELT 174          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP42_SCHPO (SWI/SNF and RSC complexes subunit arp42 OS=Schizosaccharomyces pombe GN=arp42 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.773e-21
Identity = 55/200 (27.50%), Postives = 103/200 (51.50%), Query Frame = 1
Query:   73 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 666
            EE+ +LV+D GS   + G+AG+++P  + PS      + GV   +  ++ YV DE Q    I  + +K    +GI+ +W+     W      +L+V P E+ +++TE   NP++ R+++ +  FE  + PA Y+  QAV   +A+ ++T +++D G   +   P+ +G  +   I +  LAG  L   + ++       F
Sbjct:    8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQIHAPIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVDGLIIRKGIFKQSLAGDFLNANIEQLFNTMNIEF 201          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP5_AEDAE (Actin-related protein 5 OS=Aedes aegypti GN=Arp5 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.822e-19
Identity = 56/201 (27.86%), Postives = 108/201 (53.73%), Query Frame = 1
Query:   82 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS--------YVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE---EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS-GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 645
            AA+V+DNGS  C+AG+AG D P  VF +++ +PR         +KD+         +G++  +   +   L+   +  +VT+    E+I+ + F   L +  +    HPVLLTE   NP  +R  M+++MFE +  P +  A+  +LS   + G+ +G+++  G   +H +P+  G  +   + R++L G ++ +++ ++L
Sbjct:   28 AAIVIDNGSYHCRAGWAGKDVPSLVFKNVLAKPRKD-----RSKKDTSEVVVPTVQIGNDITNIEAVRFQLRTQFDRNVVTHLHVQEQIFDYLF-GRLGINADGCVPHPVLLTECVANPNYSRMLMSELMFECYGIPGIVYAVDGLLSYRMNGGQDSGLIVSCGYQATHVIPVLNGRMVEDKVRRINLGGFNMINFMFRLL 222          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP4_ASPFU (Actin-related protein 4 OS=Aspergillus fumigatus GN=arp4 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.287e-19
Identity = 62/220 (28.18%), Postives = 105/220 (47.73%), Query Frame = 1
Query:   73 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA-QSKRGILTLKYPI-EHGIVTNWDDMEKIWHHTFYNELR--------------------------VAPEE-----HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 633
            +E++A+V+D G    +AGFAG+D P++V P+  G+  ++       Q+    GD+   + R  L++  P+   G+V +WD  EK+W ++F + L                           V  EE      P+L+TE   NP   REK  +I  E + TPA Y+A   VL+ +A+G+ + +V+D G       P+++G  L   +    L G  ++  L
Sbjct:    9 DEISAIVLDPGFSTTRAGFAGEDTPKSVIPTYYGKYTYE------AQEKLIFGDDIFVTPRPGLSIHNPMGRDGVVEDWDMAEKVWEYSFTSRLTGPKAGNPFQNGLNDVANGELPSEMEGVETEEKPLADSPLLMTECGWNPTKAREKTVEIAMEKWGTPAFYLARNGVLAAFAAGKASALVVDVGASNISVTPVHDGMILKRGVQHSPLGGDYISSQL 222          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP11_HUMAN (Actin-related protein 11 OS=Homo sapiens GN=ARP11 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.287e-19
Identity = 47/108 (43.52%), Postives = 67/108 (62.04%), Query Frame = 1
Query:  433 MFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTX*REIVRDIKEKLCYVALD 732
            MFE+FN P +Y+A+QAVL+L AS  +        TGIV+DSGDGV+H +P+ EGY +   I  + +AGRD+T ++ ++L ER          E  + IKEK CY+  D
Sbjct:    1 MFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPD 108          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP4_EMENI (Actin-related protein 4 OS=Emericella nidulans GN=arp4 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.389e-18
Identity = 59/213 (27.70%), Postives = 101/213 (47.42%), Query Frame = 1
Query:   73 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA-QSKRGILTLKYPI-EHGIVTNWDDMEKIWHHTFYNELRVAP-------------------------------EEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 612
            +EV+A+V+D G    +AGFAG+D P+++ P+  G+   +      GQ+    GD+   + R  L++  P+   G+V +WD  EK+W ++F + L  A                                 + P+L++E   NP   REK  +I  E + TPA Y+A   VL+ +A+G+ + +V+D G       P+++G  L   +    L G
Sbjct:   15 DEVSAIVLDPGFSTTRAGFAGEDTPKSLVPTYYGKYSFE------GQEKLIFGDDVFVTPRPSLSVGNPMGRDGVVEDWDMAEKLWEYSFTSRLTGAKPSNPLHNGLNDLVEGELPTEMEGVETNEKPLADSPLLMSECSWNPTKAREKTIEIAMEKWGTPAFYLARNGVLASFAAGKASALVVDIGASNISVTPVHDGMVLKRGVQHSPLGG 221          
The following BLAST results are available for this feature:
BLAST of EY659303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 483
Match NameE-valueIdentityDescription
ARP4A_ARATH4.652e-2241.67Actin-related protein 4A OS=Arabidopsis thaliana G... [more]
ARP7_ORYSJ3.015e-2135.38Actin-related protein 7 OS=Oryza sativa subsp. jap... [more]
ARP7_ORYSI3.015e-2135.38Actin-related protein 7 OS=Oryza sativa subsp. ind... [more]
ACT1_PSEMZ3.015e-2197.78Actin-1 (Fragment) OS=Pseudotsuga menziesii PE=1 S... [more]
ARP7_ARATH8.773e-2139.01Actin-related protein 7 OS=Arabidopsis thaliana GN... [more]
ARP42_SCHPO8.773e-2127.50SWI/SNF and RSC complexes subunit arp42 OS=Schizos... [more]
ARP5_AEDAE2.822e-1927.86Actin-related protein 5 OS=Aedes aegypti GN=Arp5 P... [more]
ARP4_ASPFU6.287e-1928.18Actin-related protein 4 OS=Aspergillus fumigatus G... [more]
ARP11_HUMAN6.287e-1943.52Actin-related protein 11 OS=Homo sapiens GN=ARP11 ... [more]
ARP4_EMENI2.389e-1827.70Actin-related protein 4 OS=Emericella nidulans GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-F06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659303 ID=EY659303; Name=EY659303; organism=Citrus sinensis; type=EST; length=807bp
CTCAAGTGACGTTTGTCCCAGTGTTCCACGATTCTCTAACGTACTAATTT
CAACAAATTCAAAATGTGTGACGAAGAAGTAGCAGCACTCGTTGTCGACA
ATGGATCCGGTATGTGCAAAGCCGGTTTTGCCGGTGATGATGCTCCCAGA
GCCGTATTCCCCTCAATCGTCGGTCGCCCAAGGCATCAGGGTGTCATGGT
TGGTATGGGACAAAAAGACAGTTATGTTGGAGATGAAGCTCAATCTAAGA
GAGGTATCCTTACCTTGAAATACCCCATCGAACACGGTATTGTCACAAAC
TGGGACGATATGGAGAAGATCTGGCATCACACCTTCTACAATGAACTCCG
AGTAGCGCCAGAAGAACACCCTGTCCTCTTGACAGAAGCTCCCCTGAACC
CAAAAGCTAACAGAGAAAAGATGACCCAAATCATGTTTGAAACCTTCAAC
ACACCCGCCATGTATGTAGCTATCCAAGCTGTTCTCTCTCTGTATGCTTC
TGGTCGTACCACTGGTATCGTTCTTGATTCAGGAGATGGTGTTTCCCACA
CAGTGCCAATCTATGAAGGGTATGCCTTACCTCATGCTATCCTNCGTTTG
GACTTGGCTGGTCGTGACTTGACCGACTACCTCATGAAGATCCTTACAGA
AAGAGGNTACAGTTTCACAACCACANGCTGAAGAGAAATCGTCCGTGATA
TCAAAGAAAAATTATGTTATGTAGCTTTAGACTTTGAACAAAGAATGGGC
ACCGCTGCTTNCTCAAAGCTCCTAGAAAAATCCTATGAATGGCTGATGGG
NCAAGTA
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