EY659303

Overview
NameEY659303
Unique NameEY659303
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length807
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7645 contig Csv1_Contig7645:13..819. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP6_YARLI (Actin-like protein ARP6 OS=Yarrowia lipolytica GN=ARP6 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.075e-18
Identity = 66/235 (28.09%), Postives = 114/235 (48.51%), Query Frame = 1
Query:   88 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG--IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTX*REIVRDIKEKLCYVALDFEQRMGTAAXSKLLEKSY 786
            +++DNGS   K+   GD    A  P+ + R R + V VG  Q  +   D A      L  K P E G + NWD  + +W + FYN       +  +LLT+ PL        + Q++FE +     +    A L  ++SG+     +V+D+G   +H  P+  G      I R+++ G+ +T+ L + ++ R Y+        I+  +KEK+C+V+ DF++ +  A  +K L+  Y
Sbjct:    1 MILDNGSYAIKSDRTGD----AETPNALIRGRDKTVYVG--QDLTKCKDYAS-----LVFKRPSEKGQLINWDIQKAVWDNLFYNPQTGVDTDSSLLLTQYPLTLPQVSANIDQVVFEEYGFEQYHRTEAANLVAWSSGQCLDACLVVDAGFNATHVTPVLFGQVHEPGIRRVNVGGKTMTNLLKETVSFRHYNMMDE--TYIINRVKEKVCFVSQDFDKDLDLAKKTKSLQVEY 222          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP6_CRYNE (Actin-like protein ARP6 OS=Cryptococcus neoformans GN=ARP6 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.075e-18
Identity = 68/233 (29.18%), Postives = 113/233 (48.50%), Query Frame = 1
Query:   88 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVL----SLYASGR----TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTX*REIVRDIKEKLCYVALDFEQRMGT 753
            L++DNG+   KAG +G D    V P+ + R R +        K  YVGDE  + + +  + Y  P E G++ NWD    IW   F  + L + P E  +L+TE   N     E   Q++FE F   + +    A L     LY S +       IV+D G   +H VPI +G  +   + R+D+ G+ LT++L  +++ R ++        +V  ++E   YV+L+++  + T
Sbjct:    7 LIIDNGAYEIKAGISGVDWEPRVLPNSIARSRTE--------KRVYVGDEIDNCKDLSGIVYRRPFEKGMLVNWDAERIIWDRLFSPSVLNINPTETSLLVTEPYFNLPNIAETYDQMIFEEFEFQSYFRCAPAALIPYGGLYESDQGIPPQCTIVIDMGYSYTHVVPIRDGQIVWEHVKRIDVGGKLLTNHLKHLISFRQWNMIDQ--THVVNSVREACGYVSLNWKGDLET 229          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP4_ASHGO (Actin-related protein 4 OS=Ashbya gossypii GN=ARP4 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.322e-18
Identity = 57/196 (29.08%), Postives = 96/196 (48.98%), Query Frame = 1
Query:   73 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH-PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 654
            +E+ A+V+D GS     G++G D P+A+ PS  G+          G+KD    +++    R    +   +++G V +W+  EK W     +ELR       P LLTE   N + NR+K  +++ E+ +  A Y+   A    +A GR T +V+D G  V+   P+ +G  L  + +R  +AG  L + +   L  R
Sbjct:   12 DEITAVVIDPGSFTTNIGYSGTDCPQAILPSCYGKYTE-------GEKDELFSEQSIGLPRKDYEIHNIVQNGEVVDWEKAEKQWDWAIRSELRFETNSGMPALLTEPIWNSEENRKKSLEVLLESMDFSACYLVPTATAVSFAMGRPTCLVVDIGHDVTSVCPVVDGMTLSKSSMRSYIAGSLLNELIRSQLAPR 200          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP6_DROME (Actin-like protein 13E OS=Drosophila melanogaster GN=Actr13E PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.951e-18
Identity = 62/235 (26.38%), Postives = 116/235 (49.36%), Query Frame = 1
Query:   82 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI--EHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY-----ASGRTTG-----IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTX*REIVRDIKEKLCYVALDFEQRM 747
            A +V+DNG+   K G A  D P  V P+ + + + +       ++ ++VG++    R    L Y +  + G + NW   + +W + F  + +  + E   +++TE  +N ++ +E   +I+FE +    +Y    A L+ +     +  RTT      I++D G   +H VP   G  +   I R+D+ G+ LT+ L ++++ R  +        +V  IKE +C+VA DF+Q M
Sbjct:    4 AVVVLDNGAHTAKVGLANQDEPHVV-PNCIMKAKSE-------RRRAFVGNQIDECRDTSALYYILAFQRGYLLNWHTQKTVWDYIFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEILFEEYKVDGVYKTTAADLAAFNYVADSEERTTMESLNCIIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGKALTNQLKELISYRHLNVMDE--SHVVNQIKEDVCFVAEDFKQAM 228          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP5_DICDI (Actin-related protein 5 OS=Dictyostelium discoideum GN=arpE PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.951e-18
Identity = 61/221 (27.60%), Postives = 112/221 (50.68%), Query Frame = 1
Query:   88 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH-QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA------SGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERGYSFTTTX*REIVRDIKEKLCYVA 726
            +++DNGS  C+AGFA D +P+ +F S+VG+ +     +VG   K+   GD ++     LT+K P +  ++ +    E I+ + F+        E+PVL+TE   NP   R+ M++++FE +N  ++   I ++ S Y        G    +++ S    +H   + + Y + H    R+++ G   TDYL K++  +     +   +     IKE+ CYV+
Sbjct:   33 IIIDNGSYQCRAGFANDISPKLIFRSLVGKVKSTSSPIVGNSLKE---GDISR-----LTIKSPFDSNLLVHPPSQESIFDYIFHKFGIENEIENPVLITEPTSNPTFCRKYMSELLFECYNIKSVVYGIDSLFSFYGQRDQFKDGGKNSLIIGSSFNTTHIYNV-QNYNVSHQQTKRINIGGGASTDYLRKLIHLKYPKHKSYFTQNYTNKIKEEHCYVS 244          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP5_YEAST (Actin-related protein 5 OS=Saccharomyces cerevisiae GN=ARP5 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.549e-17
Identity = 58/225 (25.78%), Postives = 112/225 (49.78%), Query Frame = 1
Query:   88 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL-KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE---HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY---ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTX*REIVRDIKEKLCYVALDFEQ 741
            + +D GS   +AGF     P  +FP+ + + R +     + +  ++VG++    + + +  + P +   VTNW+  E+I  +TF++ L V P+    +P+LLTE     ++ R    QI+FET+N P +   I ++ S Y    SG  TG+V+  G   ++ +P+ +G  +     R++  G    DYL  ++  +   F T         + +  CYV+ ++++
Sbjct:   40 IAIDFGSSKLRAGFVNHATPTHIFPNALTKFRDRK----LNKNFTFVGNDTLLDQAVRSQSRSPFDGPFVTNWNLTEEILDYTFHH-LGVVPDNGIPNPILLTERLATVQSQRTNWYQILFETYNVPGVTFGIDSLFSFYNYNPSGNKTGLVISCGHEDTNVIPVVDGAGILTDAKRINWGGHQAVDYLNDLMALKYPYFPTKMSYLQYETMYKDYCYVSRNYDE 259          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP4_YEAST (Actin-related protein 4 OS=Saccharomyces cerevisiae GN=ARP4 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.549e-17
Identity = 57/192 (29.69%), Postives = 91/192 (47.40%), Query Frame = 1
Query:   73 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH-PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 645
            +EV+A+V+D GS     G++G D P+++ PS+ G+          G K  +        R    LK  IE+G+V +WD  ++ W     NEL +      P LLTE   N   NR+K  +++ E     A Y+A  +    +A+GR   +V+D G       PI +G  L  +  R  +AG+ +   + K L
Sbjct:   12 DEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGK-----YTADEGNKKIFSEQSIGIPRKDYELKPIIENGLVIDWDTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRPNCLVVDIGHDTCSVSPIVDGMTLSKSTRRNFIAGKFINHLIKKAL 198          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP4_KLULA (Actin-related protein 4 OS=Kluyveromyces lactis GN=ARP4 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.549e-17
Identity = 56/195 (28.72%), Postives = 96/195 (49.23%), Query Frame = 1
Query:   73 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH-PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 654
            +E+ A+V+D GS +   G++G D P+++ PS  G     G       K  +        R  + +K  +E+  + +WD  ++ W +    +L+    +  PVLLTE   N +A+R+K  +I+ E+    A Y+A  +    +A GR T +V+D G  VS   P+ +G  L  +  R  +AG+ L   + K L  R
Sbjct:   12 DEINAIVIDPGSFVTNIGYSGTDCPQSIMPSSYGNVETDG-----DTKRIFNEQPLLFPRAGMEIKPIVENSTIVDWDRAQEQWEYALNTDLKFESNKGTPVLLTEPIWNSEASRKKSLEILLESMEFEACYLAANSSAVSFAMGRPTCLVVDIGHDVSTVSPVIDGMTLSKSSTRNYVAGKYLNHLIAKNLKPR 201          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP4_GIBZE (Actin-related protein 4 OS=Gibberella zeae GN=ARP4 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.685e-17
Identity = 61/219 (27.85%), Postives = 101/219 (46.12%), Query Frame = 1
Query:   73 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLK-YPIEHGIVTNWDDMEKIWHHTFYNELRVA---------------PE-----------------------EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 612
            +EV+ALV+D G    +AGFAG+D P+++ PS  G       + G   +D + GDE    R    ++ Y  +  +V +WD   +IW +   N L+                 PE                       E+P+L+TEAP N    REK  +I+ E +  PA +++   VL+ +A+G+ T +V+D G   +    I++G  L  +I +  + G
Sbjct:   19 DEVSALVLDPGYCSTRAGFAGEDVPKSILPSFYGH------VTGDNSRDLF-GDECLIPRENYEVRNYMNKDSVVEDWDVAARIWENMLVNRLQPERQTPPSKNGLNDDPRPEGQDGEGDVAMDDAEAESMEKPLGENPLLVTEAPWNTPKAREKAIEIIMENWGCPAFWMSRTPVLAAFAAGKATSLVIDVGGANTSVTAIHDGMVLKRSIQKSPVGG 230          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP6_EMENI (Actin-like protein arp6 OS=Emericella nidulans GN=arp6 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.004e-16
Identity = 73/266 (27.44%), Postives = 119/266 (44.74%), Query Frame = 1
Query:   91 VVDNGSGMCKAGFAGDDAPR----------AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA--------PEEHPVLLTEAPLNPKANREKMTQIMFETF------------------NTPAMYVAIQAVLSLY-----------ASGRTTGIVLDSGDGVSHTV--PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTX*REIVRDIKEKLCYVALDFEQ 741
            ++DNG+   KAG+A D  P           A  P+ + + R     VG     + +G        +L  + P+E G   NW+  ++IW ++F++E  V         PE+  ++ TEAP    A ++   +I+ E +                  NT     A   + SL+           AS     +V+DSG   SHTV  P+Y G  L   I RLDL G+ LT+YL ++++ R Y+        I+ ++KE +C+V+ DF +
Sbjct:   26 IIDNGAYNMKAGYAPDSQPLDDEEIALSACAAIPNAIVKTRANRTYVG-----AQIGTNVTDWNEML-FRRPVEKGYTVNWEAQKEIWENSFFDERTVRSKELHIADPEDVTIIFTEAPNALPALQKNADEIIMEEWGFGGYLRCVVGMAKPFALNTGPSLNAWNEIQSLFEDSVLSQPRAVASPAECLLVVDSG--YSHTVITPVYRGRPLQRGIRRLDLGGKHLTNYLKELVSMRQYNMVDE--TYIMNEVKESVCFVSNDFNR 281          
The following BLAST results are available for this feature:
BLAST of EY659303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 483
Match NameE-valueIdentityDescription
ARP6_YARLI4.075e-1828.09Actin-like protein ARP6 OS=Yarrowia lipolytica GN=... [more]
ARP6_CRYNE4.075e-1829.18Actin-like protein ARP6 OS=Cryptococcus neoformans... [more]
ARP4_ASHGO5.322e-1829.08Actin-related protein 4 OS=Ashbya gossypii GN=ARP4... [more]
ARP6_DROME6.951e-1826.38Actin-like protein 13E OS=Drosophila melanogaster ... [more]
ARP5_DICDI6.951e-1827.60Actin-related protein 5 OS=Dictyostelium discoideu... [more]
ARP5_YEAST1.549e-1725.78Actin-related protein 5 OS=Saccharomyces cerevisia... [more]
ARP4_YEAST1.549e-1729.69Actin-related protein 4 OS=Saccharomyces cerevisia... [more]
ARP4_KLULA1.549e-1728.72Actin-related protein 4 OS=Kluyveromyces lactis GN... [more]
ARP4_GIBZE7.685e-1727.85Actin-related protein 4 OS=Gibberella zeae GN=ARP4... [more]
ARP6_EMENI1.004e-1627.44Actin-like protein arp6 OS=Emericella nidulans GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-F06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659303 ID=EY659303; Name=EY659303; organism=Citrus sinensis; type=EST; length=807bp
CTCAAGTGACGTTTGTCCCAGTGTTCCACGATTCTCTAACGTACTAATTT
CAACAAATTCAAAATGTGTGACGAAGAAGTAGCAGCACTCGTTGTCGACA
ATGGATCCGGTATGTGCAAAGCCGGTTTTGCCGGTGATGATGCTCCCAGA
GCCGTATTCCCCTCAATCGTCGGTCGCCCAAGGCATCAGGGTGTCATGGT
TGGTATGGGACAAAAAGACAGTTATGTTGGAGATGAAGCTCAATCTAAGA
GAGGTATCCTTACCTTGAAATACCCCATCGAACACGGTATTGTCACAAAC
TGGGACGATATGGAGAAGATCTGGCATCACACCTTCTACAATGAACTCCG
AGTAGCGCCAGAAGAACACCCTGTCCTCTTGACAGAAGCTCCCCTGAACC
CAAAAGCTAACAGAGAAAAGATGACCCAAATCATGTTTGAAACCTTCAAC
ACACCCGCCATGTATGTAGCTATCCAAGCTGTTCTCTCTCTGTATGCTTC
TGGTCGTACCACTGGTATCGTTCTTGATTCAGGAGATGGTGTTTCCCACA
CAGTGCCAATCTATGAAGGGTATGCCTTACCTCATGCTATCCTNCGTTTG
GACTTGGCTGGTCGTGACTTGACCGACTACCTCATGAAGATCCTTACAGA
AAGAGGNTACAGTTTCACAACCACANGCTGAAGAGAAATCGTCCGTGATA
TCAAAGAAAAATTATGTTATGTAGCTTTAGACTTTGAACAAAGAATGGGC
ACCGCTGCTTNCTCAAAGCTCCTAGAAAAATCCTATGAATGGCTGATGGG
NCAAGTA
back to top