EY659303

Overview
NameEY659303
Unique NameEY659303
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length807
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP10_MOUSE (Actin-related protein 10 OS=Mus musculus GN=Actr10 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.570e-14
Identity = 60/229 (26.20%), Postives = 106/229 (46.29%), Query Frame = 1
Query:   76 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE---------RGYSFTT---TX*REIVRDIKEKLCYVA 726
            E  A+V+D G    K GFAG+  PR + PS++ R                    A   + I  ++Y I    + ++  +++  H  ++  L V P +  V++ E+ L P   RE +T+++F+ F  P++ +A   +++L   G  + +VLD G   S  +PIYEG  + +    L L G+ L   L   L E         +G S  +   +    ++ DIK + C+V+
Sbjct:   12 EKTAVVIDLGEAFTKCGFAGETGPRCIIPSVIKR--------------------AGMSKPIKVVQYNINTEELYSY--LKEFIHILYFRHLLVNPRDRRVVVIESVLCPSHFRETLTRVLFKYFEVPSVLLAPSHLMALLTLGINSAMVLDCGYRESLVLPIYEGIPILNCWGALPLGGKALHKELETQLLEQCTVDTGAAKGQSLPSVMGSVPEGVLEDIKVRTCFVS 218          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP10_HUMAN (Actin-related protein 10 OS=Homo sapiens GN=ACTR10 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.662e-14
Identity = 58/229 (25.33%), Postives = 105/229 (45.85%), Query Frame = 1
Query:   76 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTX*RE------------IVRDIKEKLCYVA 726
            E  A+V+D G    K GFAG+  PR + PS++ R                    A   + +  ++Y I    + ++  +++  H  ++  L V P +  V++ E+ L P   RE +T+++F+ F  P++ +A   +++L   G  + +VLD G   S  +PIYEG  + +    L L G+ L   L   L E+    T+    +            ++ DIK + C+V+
Sbjct:   12 EKTAVVIDLGEAFTKCGFAGETGPRCIIPSVIKR--------------------AGMPKPVRVVQYNINTEELYSY--LKEFIHILYFRHLLVNPRDRRVVIIESVLCPSHFRETLTRVLFKYFEVPSVLLAPSHLMALLTLGINSAMVLDCGYRESLVLPIYEGIPVLNCWGALPLGGKALHKELETQLLEQCTVDTSVAKEQSLPSVMGSVPEGVLEDIKARTCFVS 218          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP5_MOUSE (Actin-related protein 5 OS=Mus musculus GN=Actr5 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 6.089e-14
Identity = 62/229 (27.07%), Postives = 113/229 (49.34%), Query Frame = 1
Query:   88 LVVDNGSGMCKAGFA--GDDA---PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE---EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY----ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTX*REIVRDIKEKLCYVALDF 735
            LV+DNGS   +AG+A  G D    PR  F ++  R R  G   G G +   VG+   S   +   L+ P +  +  N +  E +  ++F + L V+ +   +HP++LTEA  NP  +R+ M++++FE +  P +   I ++ S Y     +  ++G+++ SG   +H +P+ EG        R++L G     YL ++L  +            + +I ++  Y+A D+
Sbjct:   33 LVLDNGSFQARAGWACPGPDPGPEPRLQFRAVCARGRG-GARGGPGPQ---VGNALGSLEPLRWMLRSPFDRNVPVNLELQELLLDYSFQH-LGVSSQGCVDHPIVLTEAVCNPLYSRQMMSELLFECYRIPKVAYGIDSLFSFYHNVPKNALSSGLIISSGYQCTHILPVLEGRLDAKNCKRINLGGSQAAGYLQRLLQLKYPGHLAAITLSRMEEILQEHSYIAEDY 256          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP7_YEAST (Actin-related protein 7 OS=Saccharomyces cerevisiae GN=ARP7 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.953e-14
Identity = 47/185 (25.41%), Postives = 88/185 (47.57%), Query Frame = 1
Query:   88 LVVDNGSGMCKAGFAGDDAPRAVFPS-IVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK---ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 630
            +V+ NGS    AGF+  + P+ + PS  + R    G    +    + +   A+ + G          G+  NWD +E  W + +  +L+V+PEE P+++T    N K   A  E+  ++ F+  N P   + I+ +    + G+++  V+D G    +  PI +G  + +A++R    G D  D+
Sbjct:    8 VVIHNGSHRTVAGFSNVELPQCIIPSSYIKRTDEGGEAEFIFGTYNMIDAAAEKRNGDEVYTLVDSQGLPYNWDALEMQWRYLYDTQLKVSPEELPLVITMPATNGKPDMAILERYYELAFDKLNVPVFQIVIEPLAIALSMGKSSAFVIDIGASGCNVTPIIDGIVVKNAVVRSKFGG-DFLDF 191          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP5_HUMAN (Actin-related protein 5 OS=Homo sapiens GN=ACTR5 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 7.953e-14
Identity = 61/233 (26.18%), Postives = 110/233 (47.21%), Query Frame = 1
Query:   88 LVVDNGSGMCKAGFA--GDDA---PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE---EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY----ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTX*REIVRDIKEKLCYVALDFEQRM 747
            LV+DNGS   +AG+A  G D    PR  F ++  R R        G     VG+   S   +   L+ P +  +  N +  E +  ++F + L V+ +   +HP++LTEA  NP  +R+ M++++FE +  P +   I ++ S Y     +   +G+++ SG   +H +PI EG        R++L G     YL ++L  +            + +I  +  Y+A D+ + +
Sbjct:   33 LVLDNGSFQVRAGWACPGQDPGPEPRLQFRAVCARGRGGA----RGASGPQVGNALGSLEPLRWMLRSPFDRNVPVNLELQELLLDYSFQH-LGVSSQGCVDHPIVLTEAVCNPLYSRQMMSELLFECYGIPKVAYGIDSLFSFYHNKPKNSMCSGLIISSGYQCTHVLPILEGRLDAKNCKRINLGGSQAAGYLQRLLQLKYPGHLAAITLSRMEEILHEHSYIAEDYVEEL 260          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP10_BOVIN (Actin-related protein 10 OS=Bos taurus GN=ACTR10 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.772e-13
Identity = 59/229 (25.76%), Postives = 105/229 (45.85%), Query Frame = 1
Query:   76 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL-----TDYLMKILTERGY-------SFTTTX*REIVRDIKEKLCYVA 726
            E  A+V+D G    K GFAG+  PR + PS++ +                    A   + I  ++Y I    + ++  +++  H  ++  L V P +  V++ E+ L P   RE +T+++F+ F  P++ +A   +++L   G  + +VLD G   S  +PIYEG  + +    L L G+ L     T  L +   + G        S   +    I+ DIK + C+V+
Sbjct:   12 EKTAVVIDLGEAFTKCGFAGETGPRCIIPSVIKK--------------------AGMPKPIRVVQYNINTEELYSY--LKEFIHILYFRHLLVNPRDRRVVVIESVLCPSHFRETLTRVLFKYFEVPSVLLAPSHLMALLTLGINSAMVLDCGYRESLVLPIYEGIPVLNCWGALPLGGKALHKELETQLLEQCTVDTGAAKEQSLPSVMGSIPEGILEDIKVRTCFVS 218          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP6_SCHPO (Actin-like protein arp6 OS=Schizosaccharomyces pombe GN=arp6 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.022e-13
Identity = 60/238 (25.21%), Postives = 107/238 (44.96%), Query Frame = 1
Query:   88 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH--GIVTNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG--------------IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTX*REIVRDIKEKLCYVALDFEQRM 747
            +V+DNG+   KAGFAG        P+ + R +    +        ++G+E  +     TL++   H  G + +W     +W     N   + P   ++ +LLT+      +      Q++FE F   A      A L  +  G  T               +V+DSG   +H +P+ +      A+ R+D+ G+ LT+YL ++++ R Y+        IV +IKE +CYV+ +F++ M
Sbjct:    8 IVLDNGAYHIKAGFAGGKVVE--IPNCLTRSKDGNRL--------FLGNELANCNDFTTLQFRRAHEKGYLVHWSTETAVWDLVMRNVGVMEPSMADYSLLLTQPVFTMPSIEHNTIQLVFEEFQFDAYLPCTPAELIPWDHGSFTMNQEDAYTGQHGECVLVIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKYNMMEE--TYIVNEIKESVCYVSQNFKEDM 233          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP6_CAEEL (Actin-like protein C08B11.6 OS=Caenorhabditis elegans GN=C08B11.6 PE=2 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 3.947e-13
Identity = 58/232 (25.00%), Postives = 106/232 (45.69%), Query Frame = 1
Query:   79 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTX*REIVRDIKEKLCYVALDFEQRMGTA 756
            +  ++ DNG    K G    ++PR V  SIV + +H+       +K  +V  E +      +L Y  PIE G V NWD  ++IW  TF   + V      + LT+      A  +  ++I+F+ F    ++    + L    S +       +V+DSG   +       G  +  +++R+D+ G+ LT+ L   ++ R      +    ++ + KE LC+V+ +F++ M  A
Sbjct:    3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHE-------KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESMKEA 223          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP4_USTMA (Actin-related protein 4 OS=Ustilago maydis GN=ARP4 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.947e-13
Identity = 40/102 (39.22%), Postives = 63/102 (61.76%), Query Frame = 1
Query:  364 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE-RGYSF 666
            EHP+LLTE   N + +REK+T++ FET  +PA Y+A ++VLS +A+G+ + +V+D G     T+PI +G+ L   I R +  G  +   L+  L   RG +F
Sbjct:  181 EHPLLLTEPAWNSRESREKLTELAFETLGSPAFYLANRSVLSSFAAGKPSSLVIDVGSTNVSTIPIVDGFILRKGIYRHNNGGEAINRALLYSLHHGRGATF 282          
BLAST of EY659303 vs. ExPASy Swiss-Prot
Match: ARP8_ORYSJ (Actin-related protein 8 OS=Oryza sativa subsp. japonica GN=ARP8 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.155e-13
Identity = 47/147 (31.97%), Postives = 78/147 (53.06%), Query Frame = 1
Query:  331 TFYNELRVAPEEHPVLLT----------EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERGYSFTTTX*REIVRDIKEKLCYVALDFE 738
            T Y  ++V P   P+++            A  + K  R+ +  ++F+  N PA+    QAVL+LYA+ RT+GIV++ G   +  VPI++G  +    +  +      LT +L +++ +R  +F +      VR IKEKLCYVA D+E
Sbjct:  188 TIYTRMQVKPSTQPIIVVLPLCHSDDTESARASRKQYRDTLYSVLFD-MNVPAVCSVDQAVLALYAAKRTSGIVVNIGFNATSIVPIFQGRVMHEIGVETVGQGALKLTGFLKELMQQRNITFESLY---TVRTIKEKLCYVAADYE 330          
The following BLAST results are available for this feature:
BLAST of EY659303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 483
Match NameE-valueIdentityDescription
ARP10_MOUSE3.570e-1426.20Actin-related protein 10 OS=Mus musculus GN=Actr10... [more]
ARP10_HUMAN4.662e-1425.33Actin-related protein 10 OS=Homo sapiens GN=ACTR10... [more]
ARP5_MOUSE6.089e-1427.07Actin-related protein 5 OS=Mus musculus GN=Actr5 P... [more]
ARP7_YEAST7.953e-1425.41Actin-related protein 7 OS=Saccharomyces cerevisia... [more]
ARP5_HUMAN7.953e-1426.18Actin-related protein 5 OS=Homo sapiens GN=ACTR5 P... [more]
ARP10_BOVIN1.772e-1325.76Actin-related protein 10 OS=Bos taurus GN=ACTR10 P... [more]
ARP6_SCHPO3.022e-1325.21Actin-like protein arp6 OS=Schizosaccharomyces pom... [more]
ARP6_CAEEL3.947e-1325.00Actin-like protein C08B11.6 OS=Caenorhabditis eleg... [more]
ARP4_USTMA3.947e-1339.22Actin-related protein 4 OS=Ustilago maydis GN=ARP4... [more]
ARP8_ORYSJ5.155e-1331.97Actin-related protein 8 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-F06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659303 ID=EY659303; Name=EY659303; organism=Citrus sinensis; type=EST; length=807bp
CTCAAGTGACGTTTGTCCCAGTGTTCCACGATTCTCTAACGTACTAATTT
CAACAAATTCAAAATGTGTGACGAAGAAGTAGCAGCACTCGTTGTCGACA
ATGGATCCGGTATGTGCAAAGCCGGTTTTGCCGGTGATGATGCTCCCAGA
GCCGTATTCCCCTCAATCGTCGGTCGCCCAAGGCATCAGGGTGTCATGGT
TGGTATGGGACAAAAAGACAGTTATGTTGGAGATGAAGCTCAATCTAAGA
GAGGTATCCTTACCTTGAAATACCCCATCGAACACGGTATTGTCACAAAC
TGGGACGATATGGAGAAGATCTGGCATCACACCTTCTACAATGAACTCCG
AGTAGCGCCAGAAGAACACCCTGTCCTCTTGACAGAAGCTCCCCTGAACC
CAAAAGCTAACAGAGAAAAGATGACCCAAATCATGTTTGAAACCTTCAAC
ACACCCGCCATGTATGTAGCTATCCAAGCTGTTCTCTCTCTGTATGCTTC
TGGTCGTACCACTGGTATCGTTCTTGATTCAGGAGATGGTGTTTCCCACA
CAGTGCCAATCTATGAAGGGTATGCCTTACCTCATGCTATCCTNCGTTTG
GACTTGGCTGGTCGTGACTTGACCGACTACCTCATGAAGATCCTTACAGA
AAGAGGNTACAGTTTCACAACCACANGCTGAAGAGAAATCGTCCGTGATA
TCAAAGAAAAATTATGTTATGTAGCTTTAGACTTTGAACAAAGAATGGGC
ACCGCTGCTTNCTCAAAGCTCCTAGAAAAATCCTATGAATGGCTGATGGG
NCAAGTA
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