EY659298

Overview
NameEY659298
Unique NameEY659298
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7469 contig Csv1_Contig7469:1..920. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY659298 vs. ExPASy Swiss-Prot
Match: DLDH_AZOVI (Dihydrolipoyl dehydrogenase OS=Azotobacter vinelandii PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.545e-11
Identity = 50/154 (32.47%), Postives = 77/154 (50.00%), Query Frame = 1 
Query:  349 FDLFTIGAGSGGVRASRFAANFGASVAICELPFSTISSETTGGVGGTCVLRGCVPKKLLVYASKFSHEFDESNGFGWKYGTEPQHDWSTLIANKNAELQRLTGIYKNILINAGITLIEGRGKIVDPHTVDV---DG--KLYSARHILISVGGXP 795
            FD+  IGAG GG  A+  +A  G   A+ E        E    +GGTC+  GC+P K L+ +S   HE  ES         E   D  T+IA K+  ++ LTG   +++   G+TL EG GK++    V+V   DG  ++    +++++ G  P
Sbjct:    5 FDVIVIGAGPGGYVAAIKSAQLGLKTALIE---KYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKVEVTAADGSSQVLDTENVILASGSKP 155
The following BLAST results are available for this feature:
BLAST of EY659298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
DLDH_AZOVI1.545e-1132.47Dihydrolipoyl dehydrogenase OS=Azotobacter vinelan... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-E12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659298 ID=EY659298; Name=EY659298; organism=Citrus sinensis; type=EST; length=919bp
ACAACCCAAATCGGAACTGAATTTGAAACCGAACCGAACGGAAAAAAATT
TCAACCTGTTTGAGTTGAAATCTTAAACCCGAATGGACCTGAACTGAAAA
CCCTAAAACCAAACTGAATAATTTTTAAAGAAATGGCAACTTCTGTTACA
ACTCCAAAGCTCACAACAACCTTCTATAACAGACTACCAATTACAGTCCC
ACTCTCTTCTCACTTTCTTTCGCTACAAAATACCCTAACTCCATTCTCTC
ACAATTGCTTCTCGCTTCTTTATTTTCAATGCCGACGCCGCCACGTTGCG
GCTCGAGCCAAGTCTGATAATGGAGCTGAGCTGCCGAGCCACTACGACTT
TGACCTCTTCACTATCGGTGCCGGCAGCGGTGGCGTCCGCGCCTCCCGTT
TTGCTGCCAATTTTGGCGCTTCTGTGGCCATTTGTGAACTTCCATTTTCC
ACCATTTCTTCCGAAACCACGGGCGGCGTTGGCGGCACGTGTGTACTTCG
TGGATGTGTGCCAAAGAAGCTTTTGGTGTACGCGTCAAAATTTTCTCATG
AATTCGATGAGAGTAATGGTTTTGGATGGAAATATGGGACGGAACCGCAG
CATGATTGGAGCACTTTGATTGCTAACAAAAATGCTGAGTTGCAGCGCCT
TACCGGTATCTACAAGAACATTCTAATCAATGCTGGCATTACCTTAATTG
AAGGTCGTGGAAAGATTGTGGACCCACACACTGTTGATGTGGATGGGAAA
CTGTATTCAGCTAGGCACATACTGATTTCGGTTGGGGGACNGCCTTNCAT
TCCTGACATTCTGGCAGTGAATATGCAATAGATTCTGATGCTGCCCTTGA
TTTGCCCTCGAAAGCTGAGAAAATTGCATTNGTTGTGGTGGNAACATTGC
CTNGNAATTGCTGGCATCT
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